SNP Links for Gene (Select 406986) - SNP

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Select item 14903468461.

rs1490346846 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:104117836 (GRCh38)
14:104584173 (GRCh37)
Canonical SPDI:: NC_000014.9:104117835:G:A
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.104117836G>A, NC_000014.8:g.104584173G>A

Select item 14889693302.

rs1488969330 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACTT [Show Flanks]
Chromosome:: 14:104115610 (GRCh38)
14:104581948 (GRCh37)
Canonical SPDI:: NC_000014.9:104115610:TACTT:TACTTACTT
Gene:: ASPG (Varview), MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TACTTACTT=0.000142/2 (ALFA)
TACT=0.000029/4 (GnomAD)
TACT=0.000064/17 (TOPMED)
HGVS:: NC_000014.9:g.104115612_104115615dup, NC_000014.8:g.104581949_104581952dup

Select item 14888567743.

rs1488856774 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:104117809 (GRCh38)
14:104584146 (GRCh37)
Canonical SPDI:: NC_000014.9:104117808:C:T
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000038/10 (TOPMED)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000014.9:g.104117809C>T, NC_000014.8:g.104584146C>T

Select item 14885957234.

rs1488595723 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:104116270 (GRCh38)
14:104582607 (GRCh37)
Canonical SPDI:: NC_000014.9:104116269:A:C
Gene:: MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.104116270A>C, NC_000014.8:g.104582607A>C

Select item 14866030465.

rs1486603046 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGG>- [Show Flanks]
Chromosome:: 14:104116522 (GRCh38)
14:104582859 (GRCh37)
Canonical SPDI:: NC_000014.9:104116517:GAGGAGG:GAGG
Gene:: MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000014.9:g.104116519AGG[1], NC_000014.8:g.104582856AGG[1]

Select item 14863112186.

rs1486311218 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 14:104117541 (GRCh38)
14:104583878 (GRCh37)
Canonical SPDI:: NC_000014.9:104117540:T:G
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.104117541T>G, NC_000014.8:g.104583878T>G

Select item 14860178497.

rs1486017849 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:104117285 (GRCh38)
14:104583622 (GRCh37)
Canonical SPDI:: NC_000014.9:104117284:G:A
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.104117285G>A, NC_000014.8:g.104583622G>A

Select item 14843838618.

rs1484383861 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:104116961 (GRCh38)
14:104583298 (GRCh37)
Canonical SPDI:: NC_000014.9:104116960:C:G
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.104116961C>G, NC_000014.8:g.104583298C>G

Select item 14820515939.

rs1482051593 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 14:104117801 (GRCh38)
14:104584138 (GRCh37)
Canonical SPDI:: NC_000014.9:104117798:GAGA:GA
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GAGA=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000014.9:g.104117799GA[1], NC_000014.8:g.104584136GA[1]

Select item 148139705710.

rs1481397057 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:104117027 (GRCh38)
14:104583364 (GRCh37)
Canonical SPDI:: NC_000014.9:104117026:G:A
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.104117027G>A, NC_000014.8:g.104583364G>A

Select item 148031799611.

rs1480317996 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:104117621 (GRCh38)
14:104583958 (GRCh37)
Canonical SPDI:: NC_000014.9:104117620:C:T
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.104117621C>T, NC_000014.8:g.104583958C>T

Select item 147986490712.

rs1479864907 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:104117997 (GRCh38)
14:104584334 (GRCh37)
Canonical SPDI:: NC_000014.9:104117996:G:A
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.104117997G>A, NC_000014.8:g.104584334G>A

Select item 147870054513.

rs1478700545 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 14:104116627 (GRCh38)
14:104582964 (GRCh37)
Canonical SPDI:: NC_000014.9:104116626:C:G,NC_000014.9:104116626:C:T
Gene:: MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
T=0.00006/1 (TOMMO)
HGVS:: NC_000014.9:g.104116627C>G, NC_000014.9:g.104116627C>T, NC_000014.8:g.104582964C>G, NC_000014.8:g.104582964C>T

Select item 147867341314.

rs1478673413 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:104117324 (GRCh38)
14:104583661 (GRCh37)
Canonical SPDI:: NC_000014.9:104117323:C:T
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.104117324C>T, NC_000014.8:g.104583661C>T

Select item 147778682115.

rs1477786821 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:104117774 (GRCh38)
14:104584111 (GRCh37)
Canonical SPDI:: NC_000014.9:104117773:A:G
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.104117774A>G, NC_000014.8:g.104584111A>G

Select item 147777500016.

rs1477775000 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCGCGCGG>- [Show Flanks]
Chromosome:: 14:104116956 (GRCh38)
14:104583293 (GRCh37)
Canonical SPDI:: NC_000014.9:104116948:CGCGCGGGCGCGCGG:CGCGCGG
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGCGCGG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000014.9:g.104116956_104116963del, NC_000014.8:g.104583293_104583300del

Select item 147749201517.

rs1477492015 [Homo sapiens]

Variant type:: INS
Alleles:: ->TA [Show Flanks]
Chromosome:: 14:104117251 (GRCh38)
14:104583589 (GRCh37)
Canonical SPDI:: NC_000014.9:104117251::TA
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TA=0./0 (ALFA)
TA=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.104117251_104117252insTA, NC_000014.8:g.104583588_104583589insTA

Select item 147181664118.

rs1471816641 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:104115682 (GRCh38)
14:104582019 (GRCh37)
Canonical SPDI:: NC_000014.9:104115681:C:T
Gene:: ASPG (Varview), MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.104115682C>T, NC_000014.8:g.104582019C>T

Select item 146999480419.

rs1469994804 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:104116742 (GRCh38)
14:104583079 (GRCh37)
Canonical SPDI:: NC_000014.9:104116741:C:T
Gene:: MIR203A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.104116742C>T, NC_000014.8:g.104583079C>T

Select item 146976891120.

rs1469768911 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 14:104117551 (GRCh38)
14:104583888 (GRCh37)
Canonical SPDI:: NC_000014.9:104117550:A:C,NC_000014.9:104117550:A:G
Gene:: MIR203A (Varview), MIR203B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000014.9:g.104117551A>C, NC_000014.9:g.104117551A>G, NC_000014.8:g.104583888A>C, NC_000014.8:g.104583888A>G

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