SNP Links for Gene (Select 406909) - SNP

Links from Gene

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Select item 14905227591.

rs1490522759 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63179018 (GRCh38)
20:61810370 (GRCh37)
Canonical SPDI:: NC_000020.11:63179017:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63179018C>T, NC_000020.10:g.61810370C>T

Select item 14900056472.

rs1490005647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:63177858 (GRCh38)
20:61809210 (GRCh37)
Canonical SPDI:: NC_000020.11:63177857:C:A
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.63177858C>A, NC_000020.10:g.61809210C>A

Select item 14896137603.

rs1489613760 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:63178741 (GRCh38)
20:61810093 (GRCh37)
Canonical SPDI:: NC_000020.11:63178740:G:A,NC_000020.11:63178740:G:C
Gene:: MIR124-3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000020.11:g.63178741G>A, NC_000020.11:g.63178741G>C, NC_000020.10:g.61810093G>A, NC_000020.10:g.61810093G>C

Select item 14885797384.

rs1488579738 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:63177565 (GRCh38)
20:61808917 (GRCh37)
Canonical SPDI:: NC_000020.11:63177564:C:G
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.63177565C>G, NC_000020.10:g.61808917C>G

Select item 14879233965.

rs1487923396 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:63176773 (GRCh38)
20:61808125 (GRCh37)
Canonical SPDI:: NC_000020.11:63176772:A:G
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.63176773A>G, NC_000020.10:g.61808125A>G

Select item 14865322836.

rs1486532283 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63177936 (GRCh38)
20:61809288 (GRCh37)
Canonical SPDI:: NC_000020.11:63177935:G:A
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000562/1 (Korea1K)
HGVS:: NC_000020.11:g.63177936G>A, NC_000020.10:g.61809288G>A

Select item 14843290717.

rs1484329071 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63178340 (GRCh38)
20:61809692 (GRCh37)
Canonical SPDI:: NC_000020.11:63178339:G:A
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000020.11:g.63178340G>A, NC_000020.10:g.61809692G>A

Select item 14832784568.

rs1483278456 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:63177322 (GRCh38)
20:61808674 (GRCh37)
Canonical SPDI:: NC_000020.11:63177321:T:C
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63177322T>C, NC_000020.10:g.61808674T>C

Select item 14830026629.

rs1483002662 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63176893 (GRCh38)
20:61808245 (GRCh37)
Canonical SPDI:: NC_000020.11:63176892:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000342/1 (KOREAN)
HGVS:: NC_000020.11:g.63176893C>T, NC_000020.10:g.61808245C>T

Select item 148269800110.

rs1482698001 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:63177576 (GRCh38)
20:61808928 (GRCh37)
Canonical SPDI:: NC_000020.11:63177575:C:A
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63177576C>A, NC_000020.10:g.61808928C>A

Select item 148138586911.

rs1481385869 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63179069 (GRCh38)
20:61810421 (GRCh37)
Canonical SPDI:: NC_000020.11:63179068:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63179069C>T, NC_000020.10:g.61810421C>T

Select item 147964611912.

rs1479646119 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:63177195 (GRCh38)
20:61808547 (GRCh37)
Canonical SPDI:: NC_000020.11:63177194:T:C
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.63177195T>C, NC_000020.10:g.61808547T>C

Select item 147955876413.

rs1479558764 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 20:63178110 (GRCh38)
20:61809462 (GRCh37)
Canonical SPDI:: NC_000020.11:63178109:G:A,NC_000020.11:63178109:G:C,NC_000020.11:63178109:G:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.63178110G>A, NC_000020.11:g.63178110G>C, NC_000020.11:g.63178110G>T, NC_000020.10:g.61809462G>A, NC_000020.10:g.61809462G>C, NC_000020.10:g.61809462G>T

Select item 147950563014.

rs1479505630 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63177403 (GRCh38)
20:61808755 (GRCh37)
Canonical SPDI:: NC_000020.11:63177402:G:A
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63177403G>A, NC_000020.10:g.61808755G>A

Select item 147920881115.

rs1479208811 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:63178993 (GRCh38)
20:61810345 (GRCh37)
Canonical SPDI:: NC_000020.11:63178992:G:A,NC_000020.11:63178992:G:C
Gene:: MIR124-3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.63178993G>A, NC_000020.11:g.63178993G>C, NC_000020.10:g.61810345G>A, NC_000020.10:g.61810345G>C

Select item 147865789716.

rs1478657897 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:63178042 (GRCh38)
20:61809394 (GRCh37)
Canonical SPDI:: NC_000020.11:63178041:C:A,NC_000020.11:63178041:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63178042C>A, NC_000020.11:g.63178042C>T, NC_000020.10:g.61809394C>A, NC_000020.10:g.61809394C>T

Select item 147805962717.

rs1478059627 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:63177600 (GRCh38)
20:61808952 (GRCh37)
Canonical SPDI:: NC_000020.11:63177599:A:G
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000084/1 (ALFA)
G=0.000122/17 (GnomAD)
G=0.00017/45 (TOPMED)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000020.11:g.63177600A>G, NC_000020.10:g.61808952A>G

Select item 147800869718.

rs1478008697 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63176767 (GRCh38)
20:61808119 (GRCh37)
Canonical SPDI:: NC_000020.11:63176766:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63176767C>T, NC_000020.10:g.61808119C>T

Select item 147740438019.

rs1477404380 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:63176846 (GRCh38)
20:61808198 (GRCh37)
Canonical SPDI:: NC_000020.11:63176845:G:C
Gene:: MIR124-3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000020.11:g.63176846G>C, NC_000020.10:g.61808198G>C

Select item 147613093720.

rs1476130937 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 20:63178818 (GRCh38)
20:61810170 (GRCh37)
Canonical SPDI:: NC_000020.11:63178817:C:G,NC_000020.11:63178817:C:T
Gene:: MIR124-3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000015/2 (GnomAD)
HGVS:: NC_000020.11:g.63178818C>G, NC_000020.11:g.63178818C>T, NC_000020.10:g.61810170C>G, NC_000020.10:g.61810170C>T

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