SNP Links for Gene (Select 400797) - SNP

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Items: 1 to 20 of 4999

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Select item 14913527191.

rs1491352719 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:178482093 (GRCh38)
1:178451228 (GRCh37)
Canonical SPDI:: NC_000001.11:178482091:ACA:A
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.178482093_178482094del, NC_000001.10:g.178451228_178451229del, NM_004841.4:c.*8854_*8855del, NM_170692.3:c.*8854_*8855del

Select item 14909691062.

rs1490969106 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:178492021 (GRCh38)
1:178461156 (GRCh37)
Canonical SPDI:: NC_000001.11:178492020:T:A
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.178492021T>A, NC_000001.10:g.178461156T>A

Select item 14904992593.

rs1490499259 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:178499271 (GRCh38)
1:178468406 (GRCh37)
Canonical SPDI:: NC_000001.11:178499270:T:C
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.178499271T>C, NC_000001.10:g.178468406T>C

Select item 14904689094.

rs1490468909 [Homo sapiens]

Variant type:: DELINS
Alleles:: GACATCTGTCTT>- [Show Flanks]
Chromosome:: 1:178485438 (GRCh38)
1:178454573 (GRCh37)
Canonical SPDI:: NC_000001.11:178485435:TTGACATCTGTCTT:TT
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0.000071/1 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.178485438_178485449del, NC_000001.10:g.178454573_178454584del

Select item 14901453255.

rs1490145325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:178486375 (GRCh38)
1:178455510 (GRCh37)
Canonical SPDI:: NC_000001.11:178486374:C:A
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178486375C>A, NC_000001.10:g.178455510C>A

Select item 14901375646.

rs1490137564 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:178500956 (GRCh38)
1:178470091 (GRCh37)
Canonical SPDI:: NC_000001.11:178500955:A:C
Gene:: CLEC20A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178500956A>C, NC_000001.10:g.178470091A>C

Select item 14892206437.

rs1489220643 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:178496345 (GRCh38)
1:178465480 (GRCh37)
Canonical SPDI:: NC_000001.11:178496344:A:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178496345A>G, NC_000001.10:g.178465480A>G, NM_001001689.1:c.-1081T>C

Select item 14891242098.

rs1489124209 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:178491292 (GRCh38)
1:178460427 (GRCh37)
Canonical SPDI:: NC_000001.11:178491291:C:A
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.178491292C>A, NC_000001.10:g.178460427C>A

Select item 14890616699.

rs1489061669 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:178483321 (GRCh38)
1:178452456 (GRCh37)
Canonical SPDI:: NC_000001.11:178483320:A:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.178483321A>G, NC_000001.10:g.178452456A>G, NM_004841.4:c.*10082A>G, NM_170692.3:c.*10082A>G

Select item 148899867610.

rs1488998676 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:178482292 (GRCh38)
1:178451427 (GRCh37)
Canonical SPDI:: NC_000001.11:178482291:A:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178482292A>G, NC_000001.10:g.178451427A>G, NM_004841.4:c.*9053A>G, NM_170692.3:c.*9053A>G

Select item 148893830311.

rs1488938303 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:178501069 (GRCh38)
1:178470204 (GRCh37)
Canonical SPDI:: NC_000001.11:178501068:A:G
Gene:: CLEC20A (Varview), LOC101928866 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.178501069A>G, NC_000001.10:g.178470204A>G

Select item 148878056212.

rs1488780562 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:178486394 (GRCh38)
1:178455529 (GRCh37)
Canonical SPDI:: NC_000001.11:178486393:T:C
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178486394T>C, NC_000001.10:g.178455529T>C

Select item 148851667413.

rs1488516674 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:178497225 (GRCh38)
1:178466360 (GRCh37)
Canonical SPDI:: NC_000001.11:178497224:C:T
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000495/8 (TOMMO)
T=0.001092/2 (Korea1K)
T=0.001711/5 (KOREAN)
HGVS:: NC_000001.11:g.178497225C>T, NC_000001.10:g.178466360C>T

Select item 148812623814.

rs1488126238 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:178492655 (GRCh38)
1:178461790 (GRCh37)
Canonical SPDI:: NC_000001.11:178492654:C:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000342/1 (KOREAN)
G=0.000546/1 (Korea1K)
HGVS:: NC_000001.11:g.178492655C>G, NC_000001.10:g.178461790C>G

Select item 148811959615.

rs1488119596 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:178483659 (GRCh38)
1:178452794 (GRCh37)
Canonical SPDI:: NC_000001.11:178483658:A:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
HGVS:: NC_000001.11:g.178483659A>G, NC_000001.10:g.178452794A>G, NM_004841.4:c.*10420A>G, NM_170692.3:c.*10420A>G

Select item 148808414316.

rs1488084143 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAT>- [Show Flanks]
Chromosome:: 1:178488126 (GRCh38)
1:178457261 (GRCh37)
Canonical SPDI:: NC_000001.11:178488121:TGATGAT:TGAT
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TGAT=0./0 (ALFA)
HGVS:: NC_000001.11:g.178488123GAT[1], NC_000001.10:g.178457258GAT[1]

Select item 148802288417.

rs1488022884 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:178485714 (GRCh38)
1:178454849 (GRCh37)
Canonical SPDI:: NC_000001.11:178485713:C:G
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.178485714C>G, NC_000001.10:g.178454849C>G

Select item 148801397818.

rs1488013978 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:178491786 (GRCh38)
1:178460921 (GRCh37)
Canonical SPDI:: NC_000001.11:178491785:T:C
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178491786T>C, NC_000001.10:g.178460921T>C

Select item 148796363019.

rs1487963630 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:178485301 (GRCh38)
1:178454436 (GRCh37)
Canonical SPDI:: NC_000001.11:178485300:G:A
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.178485301G>A, NC_000001.10:g.178454436G>A

Select item 148790128820.

rs1487901288 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:178491881 (GRCh38)
1:178461016 (GRCh37)
Canonical SPDI:: NC_000001.11:178491880:C:T
Gene:: CLEC20A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.178491881C>T, NC_000001.10:g.178461016C>T

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