Links from Gene
Items: 1 to 20 of 2135
1.
rs1490616086 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C,T
[Show Flanks]
- Chromosome:
- 22:30246486
(GRCh38)
22:30642475
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30246485:G:C,NC_000022.11:30246485:G:T
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant,coding_sequence_variant,missense_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
NC_000022.11:g.30246486G>C, NC_000022.11:g.30246486G>T, NC_000022.10:g.30642475G>C, NC_000022.10:g.30642475G>T, NG_008721.1:g.5322C>G, NG_008721.1:g.5322C>A, XM_047441361.1:c.19C>G, XM_047441361.1:c.19C>A, NM_052856.1:c.-17G>C, NM_052856.1:c.-17G>T, NR_148946.1:n.277G>C, NR_148946.1:n.277G>T, XP_047297317.1:p.Arg7Gly, XP_047297317.1:p.Arg7Ser
2.
rs1490358218 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 22:30245954
(GRCh38)
22:30641943
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30245953:A:G
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
4.
rs1489885936 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 22:30246699
(GRCh38)
22:30642688
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30246698:G:A,NC_000022.11:30246698:G:T
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,5_prime_UTR_variant
- Validated:
- by frequency
- MAF:
T=0.000006/1
(GnomAD_exomes)
- HGVS:
NC_000022.11:g.30246699G>A, NC_000022.11:g.30246699G>T, NC_000022.10:g.30642688G>A, NC_000022.10:g.30642688G>T, NG_008721.1:g.5109C>T, NG_008721.1:g.5109C>A, NM_002309.5:c.-4C>T, NM_002309.5:c.-4C>A, NM_002309.4:c.-4C>T, NM_002309.4:c.-4C>A, NM_001257135.2:c.-4C>T, NM_001257135.2:c.-4C>A, NM_001257135.1:c.-4C>T, NM_001257135.1:c.-4C>A, XM_047441361.1:c.-195C>T, XM_047441361.1:c.-195C>A, NM_052856.1:c.197G>A, NM_052856.1:c.197G>T, NR_148946.1:n.490G>A, NR_148946.1:n.490G>T
5.
rs1489434369 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 22:30246791
(GRCh38)
22:30642780
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30246790:C:G,NC_000022.11:30246790:C:T
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
- HGVS:
NC_000022.11:g.30246791C>G, NC_000022.11:g.30246791C>T, NC_000022.10:g.30642780C>G, NC_000022.10:g.30642780C>T, NG_008721.1:g.5017G>C, NG_008721.1:g.5017G>A, NM_002309.4:c.-96G>C, NM_002309.4:c.-96G>A, NM_001257135.1:c.-96G>C, NM_001257135.1:c.-96G>A, NM_052856.1:c.289C>G, NM_052856.1:c.289C>T, NR_148946.1:n.582C>G, NR_148946.1:n.582C>T
6.
rs1489431612 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 22:30245376
(GRCh38)
22:30641365
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30245375:G:A
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000011/3
(TOPMED)
- HGVS:
7.
rs1489201526 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 22:30241724
(GRCh38)
22:30637713
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30241723:C:A
- Gene:
- LIF (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
8.
rs1489039203 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 22:30243957
(GRCh38)
22:30639946
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30243956:C:G
- Gene:
- LIF (Varview)
- Functional Consequence:
- coding_sequence_variant,missense_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
NC_000022.11:g.30243957C>G, NC_000022.10:g.30639946C>G, NG_008721.1:g.7851G>C, NM_002309.5:c.303G>C, NM_002309.4:c.303G>C, NM_001257135.2:c.124G>C, NM_001257135.1:c.124G>C, XM_047441361.1:c.621G>C, NP_002300.1:p.Lys101Asn, NP_001244064.1:p.Ala42Pro, XP_047297317.1:p.Lys207Asn
9.
rs1488837948 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 22:30240950
(GRCh38)
22:30636939
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30240949:T:C
- Gene:
- LIF (Varview), LIF-AS1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.000071/1
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
10.
rs1488515870 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 22:30243279
(GRCh38)
22:30639268
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30243278:C:T
- Gene:
- LIF (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0./0
(GnomAD)
- HGVS:
11.
rs1488484689 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 22:30244780
(GRCh38)
22:30640769
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30244779:C:T
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,missense_variant,coding_sequence_variant,2KB_upstream_variant
- Validated:
- by frequency
- MAF:
T=0.000004/1
(GnomAD_exomes)
- HGVS:
12.
rs1488425906 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 22:30248327
(GRCh38)
22:30644316
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30248326:G:A
- Gene:
- LIF (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000011/3
(TOPMED)
A=0.000021/3
(GnomAD)
A=0.00006/1
(TOMMO)
- HGVS:
13.
rs1487838033 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 22:30240885
(GRCh38)
22:30636874
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30240884:A:C,NC_000022.11:30240884:A:G
- Gene:
- LIF (Varview), LIF-AS1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000021/3
(GnomAD)
- HGVS:
NC_000022.11:g.30240885A>C, NC_000022.11:g.30240885A>G, NC_000022.10:g.30636874A>C, NC_000022.10:g.30636874A>G, NG_008721.1:g.10923T>G, NG_008721.1:g.10923T>C, NM_002309.5:c.*2766T>G, NM_002309.5:c.*2766T>C, NM_002309.4:c.*2766T>G, NM_002309.4:c.*2766T>C, NM_001257135.2:c.*2929T>G, NM_001257135.2:c.*2929T>C, NM_001257135.1:c.*2929T>G, NM_001257135.1:c.*2929T>C, XM_047441361.1:c.*2766T>G, XM_047441361.1:c.*2766T>C
14.
rs1487568830 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 22:30242018
(GRCh38)
22:30638007
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30242017:G:A
- Gene:
- LIF (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency
- MAF:
A=0.000007/1
(GnomAD)
- HGVS:
15.
rs1487479972 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 22:30244408
(GRCh38)
22:30640397
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30244407:G:A
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
16.
rs1487414080 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 22:30247392
(GRCh38)
22:30643381
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30247391:C:T
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
17.
rs1487093302 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 22:30243691
(GRCh38)
22:30639680
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30243690:T:C
- Gene:
- LIF (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,coding_sequence_variant,missense_variant
- Validated:
- by frequency,by cluster
- MAF:
C=0.000004/1
(GnomAD_exomes)
C=0.000035/1
(TOMMO)
- HGVS:
18.
rs1486721054 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 22:30243587
(GRCh38)
22:30639576
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30243586:G:C
- Gene:
- LIF (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
19.
rs1486261612 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,G
[Show Flanks]
- Chromosome:
- 22:30246025
(GRCh38)
22:30642014
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30246024:C:A,NC_000022.11:30246024:C:G
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000061/1
(
ALFA)
G=0.000004/1
(TOPMED)
A=0.000223/1
(Estonian)
- HGVS:
20.
rs1486162978 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 22:30246307
(GRCh38)
22:30642296
(GRCh37)
- Canonical SPDI:
- NC_000022.11:30246306:G:A
- Gene:
- LIF (Varview), LIF-AS2 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant,coding_sequence_variant,synonymous_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS: