SNP Links for Gene (Select 390081) - SNP

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Select item 14904687881.

rs1490468788 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:5884438 (GRCh38)
11:5905668 (GRCh37)
Canonical SPDI:: NC_000011.10:5884437:T:A,NC_000011.10:5884437:T:C
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
C=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.5884438T>A, NC_000011.10:g.5884438T>C, NC_000011.9:g.5905668T>A, NC_000011.9:g.5905668T>C, NM_001005165.2:c.146T>A, NM_001005165.2:c.146T>C, NM_001005165.1:c.146T>A, NM_001005165.1:c.146T>C, NP_001005165.1:p.Phe49Tyr, NP_001005165.1:p.Phe49Ser

Select item 14890053552.

rs1489005355 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14887848083.

rs1488784808 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5885104 (GRCh38)
11:5906334 (GRCh37)
Canonical SPDI:: NC_000011.10:5885103:A:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (GnomAD_exomes)
G=0.000014/2 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000011.10:g.5885104A>G, NC_000011.9:g.5906334A>G, NM_001005165.2:c.812A>G, NM_001005165.1:c.812A>G, NP_001005165.1:p.His271Arg

Select item 14887140934.

rs1488714093 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5883273 (GRCh38)
11:5904503 (GRCh37)
Canonical SPDI:: NC_000011.10:5883272:A:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5883273A>G, NC_000011.9:g.5904503A>G

Select item 14883379765.

rs1488337976 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:5884877 (GRCh38)
11:5906107 (GRCh37)
Canonical SPDI:: NC_000011.10:5884876:G:A,NC_000011.10:5884876:G:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: coding_sequence_variant,genic_downstream_transcript_variant,intron_variant,missense_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
A=0.000035/1 (TOMMO)
T=0.000342/1 (KOREAN)
T=0.000546/1 (Korea1K)
HGVS:: NC_000011.10:g.5884877G>A, NC_000011.10:g.5884877G>T, NC_000011.9:g.5906107G>A, NC_000011.9:g.5906107G>T, NM_001005165.2:c.585G>A, NM_001005165.2:c.585G>T, NM_001005165.1:c.585G>A, NM_001005165.1:c.585G>T, NP_001005165.1:p.Lys195Asn

Select item 14882946036.

rs1488294603 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:5883696 (GRCh38)
11:5904926 (GRCh37)
Canonical SPDI:: NC_000011.10:5883695:A:C
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5883696A>C, NC_000011.9:g.5904926A>C

Select item 14875225747.

rs1487522574 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:5884433 (GRCh38)
11:5905663 (GRCh37)
Canonical SPDI:: NC_000011.10:5884432:T:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5884433T>G, NC_000011.9:g.5905663T>G, NM_001005165.2:c.141T>G, NM_001005165.1:c.141T>G, NP_001005165.1:p.Ile47Met

Select item 14852252598.

rs1485225259 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:5882860 (GRCh38)
11:5904090 (GRCh37)
Canonical SPDI:: NC_000011.10:5882859:C:A
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.5882860C>A, NC_000011.9:g.5904090C>A

Select item 14837566619.

rs1483756661 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5883154 (GRCh38)
11:5904384 (GRCh37)
Canonical SPDI:: NC_000011.10:5883153:A:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.5883154A>G, NC_000011.9:g.5904384A>G

Select item 148370146210.

rs1483701462 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:5883069 (GRCh38)
11:5904299 (GRCh37)
Canonical SPDI:: NC_000011.10:5883068:T:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.5883069T>G, NC_000011.9:g.5904299T>G

Select item 148343034811.

rs1483430348 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:5884108 (GRCh38)
11:5905338 (GRCh37)
Canonical SPDI:: NC_000011.10:5884107:G:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000106/2 (TOMMO)
HGVS:: NC_000011.10:g.5884108G>T, NC_000011.9:g.5905338G>T

Select item 148173825012.

rs1481738250 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:5883979 (GRCh38)
11:5905209 (GRCh37)
Canonical SPDI:: NC_000011.10:5883978:G:A
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5883979G>A, NC_000011.9:g.5905209G>A

Select item 148017762813.

rs1480177628 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:5885180 (GRCh38)
11:5906410 (GRCh37)
Canonical SPDI:: NC_000011.10:5885179:G:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant,genic_downstream_transcript_variant
HGVS:: NC_000011.10:g.5885180G>T, NC_000011.9:g.5906410G>T, NM_001005165.2:c.888G>T, NM_001005165.1:c.888G>T, NP_001005165.1:p.Arg296Ser

Select item 147877752014.

rs1478777520 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5884980 (GRCh38)
11:5906210 (GRCh37)
Canonical SPDI:: NC_000011.10:5884979:C:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.5884980C>T, NC_000011.9:g.5906210C>T, NM_001005165.2:c.688C>T, NM_001005165.1:c.688C>T, NP_001005165.1:p.Pro230Ser

Select item 147844864815.

rs1478448648 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 11:5885250 (GRCh38)
11:5906480 (GRCh37)
Canonical SPDI:: NC_000011.10:5885249:A:G,NC_000011.10:5885249:A:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5885250A>G, NC_000011.10:g.5885250A>T, NC_000011.9:g.5906480A>G, NC_000011.9:g.5906480A>T, NM_001005165.2:c.*19A>G, NM_001005165.2:c.*19A>T

Select item 147787659616.

rs1477876596 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:5883749 (GRCh38)
11:5904979 (GRCh37)
Canonical SPDI:: NC_000011.10:5883748:C:A
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5883749C>A, NC_000011.9:g.5904979C>A

Select item 147753806317.

rs1477538063 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5884464 (GRCh38)
11:5905694 (GRCh37)
Canonical SPDI:: NC_000011.10:5884463:C:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5884464C>T, NC_000011.9:g.5905694C>T, NM_001005165.2:c.172C>T, NM_001005165.1:c.172C>T, NP_001005165.1:p.His58Tyr

Select item 147750180418.

rs1477501804 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5884260 (GRCh38)
11:5905490 (GRCh37)
Canonical SPDI:: NC_000011.10:5884259:A:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.5884260A>G, NC_000011.9:g.5905490A>G, NM_001005165.2:c.-33A>G

Select item 147730824719.

rs1477308247 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5882948 (GRCh38)
11:5904178 (GRCh37)
Canonical SPDI:: NC_000011.10:5882947:A:G
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.5882948A>G, NC_000011.9:g.5904178A>G

Select item 147598173520.

rs1475981735 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTCT>- [Show Flanks]
Chromosome:: 11:5883691 (GRCh38)
11:5904921 (GRCh37)
Canonical SPDI:: NC_000011.10:5883689:TGTCT:T
Gene:: OR52E4 (Varview), LOC112268071 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.5883691_5883694del, NC_000011.9:g.5904921_5904924del

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