SNP Links for Gene (Select 390036) - SNP

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Select item 14908956901.

rs1490895690 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:4488292 (GRCh38)
11:4509522 (GRCh37)
Canonical SPDI:: NC_000011.10:4488291:T:C
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000043/6 (GnomAD)
HGVS:: NC_000011.10:g.4488292T>C, NC_000011.9:g.4509522T>C

Select item 14905765282.

rs1490576528 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:4489715 (GRCh38)
11:4510945 (GRCh37)
Canonical SPDI:: NC_000011.10:4489714:C:T
Gene:: OR52K1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.4489715C>T, NC_000011.9:g.4510945C>T, NM_001005171.3:c.815C>T, NM_001005171.2:c.815C>T, NM_001385736.1:c.776C>T, NP_001005171.2:p.Pro272Leu, NP_001372665.1:p.Pro259Leu

Select item 14904016433.

rs1490401643 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:4487368 (GRCh38)
11:4508598 (GRCh37)
Canonical SPDI:: NC_000011.10:4487367:T:C
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000023/6 (TOPMED)
C=0.000043/6 (GnomAD)
HGVS:: NC_000011.10:g.4487368T>C, NC_000011.9:g.4508598T>C

Select item 14902669204.

rs1490266920 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:4490261 (GRCh38)
11:4511491 (GRCh37)
Canonical SPDI:: NC_000011.10:4490260:A:G
Gene:: OR52K1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000011.10:g.4490261A>G, NC_000011.9:g.4511491A>G, NM_001005171.3:c.*416A>G, NM_001385736.1:c.*416A>G

Select item 14895734185.

rs1489573418 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:4486939 (GRCh38)
11:4508169 (GRCh37)
Canonical SPDI:: NC_000011.10:4486938:G:A,NC_000011.10:4486938:G:C
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.4486939G>A, NC_000011.10:g.4486939G>C, NC_000011.9:g.4508169G>A, NC_000011.9:g.4508169G>C

Select item 14894341986.

rs1489434198 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:4488248 (GRCh38)
11:4509478 (GRCh37)
Canonical SPDI:: NC_000011.10:4488247:G:T
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4488248G>T, NC_000011.9:g.4509478G>T

Select item 14893993657.

rs1489399365 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:4488765 (GRCh38)
11:4509995 (GRCh37)
Canonical SPDI:: NC_000011.10:4488764:A:T
Gene:: OR52K1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4488765A>T, NC_000011.9:g.4509995A>T, NM_001005171.3:c.-136A>T

Select item 14887336368.

rs1488733636 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:4489999 (GRCh38)
11:4511229 (GRCh37)
Canonical SPDI:: NC_000011.10:4489998:A:C
Gene:: OR52K1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0.0002/1 (ALFA)
C=0.0002/1 (Estonian)
HGVS:: NC_000011.10:g.4489999A>C, NC_000011.9:g.4511229A>C, NM_001005171.3:c.*154A>C, NM_001385736.1:c.*154A>C

Select item 14883467529.

rs1488346752 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:4489410 (GRCh38)
11:4510640 (GRCh37)
Canonical SPDI:: NC_000011.10:4489409:C:T
Gene:: OR52K1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4489410C>T, NC_000011.9:g.4510640C>T, NM_001005171.3:c.510C>T, NM_001005171.2:c.510C>T, NM_001385736.1:c.471C>T

Select item 148810792810.

rs1488107928 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 11:4490270 (GRCh38)
11:4511501 (GRCh37)
Canonical SPDI:: NC_000011.10:4490270:CCCCC:CCCCCC
Gene:: OR52K1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCC=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.4490275dup, NC_000011.9:g.4511505dup, NM_001005171.3:c.*430dup, NM_001385736.1:c.*430dup

Select item 148684813211.

rs1486848132 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:4490366 (GRCh38)
11:4511596 (GRCh37)
Canonical SPDI:: NC_000011.10:4490365:T:C
Gene:: OR52K1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4490366T>C, NC_000011.9:g.4511596T>C, NM_001005171.3:c.*521T>C, NM_001385736.1:c.*521T>C

Select item 148623362612.

rs1486233626 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:4487020 (GRCh38)
11:4508250 (GRCh37)
Canonical SPDI:: NC_000011.10:4487019:C:G,NC_000011.10:4487019:C:T
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.4487020C>G, NC_000011.10:g.4487020C>T, NC_000011.9:g.4508250C>G, NC_000011.9:g.4508250C>T

Select item 148616884013.

rs1486168840 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:4487311 (GRCh38)
11:4508541 (GRCh37)
Canonical SPDI:: NC_000011.10:4487310:G:A
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4487311G>A, NC_000011.9:g.4508541G>A

Select item 148596752314.

rs1485967523 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:4489962 (GRCh38)
11:4511192 (GRCh37)
Canonical SPDI:: NC_000011.10:4489961:A:G
Gene:: OR52K1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4489962A>G, NC_000011.9:g.4511192A>G, NM_001005171.3:c.*117A>G, NM_001385736.1:c.*117A>G

Select item 148522075315.

rs1485220753 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:4487335 (GRCh38)
11:4508565 (GRCh37)
Canonical SPDI:: NC_000011.10:4487334:A:G
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.4487335A>G, NC_000011.9:g.4508565A>G

Select item 148357377616.

rs1483573776 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:4489510 (GRCh38)
11:4510740 (GRCh37)
Canonical SPDI:: NC_000011.10:4489509:G:A
Gene:: OR52K1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4489510G>A, NC_000011.9:g.4510740G>A, NM_001005171.3:c.610G>A, NM_001005171.2:c.610G>A, NM_001385736.1:c.571G>A, NP_001005171.2:p.Val204Met, NP_001372665.1:p.Val191Met

Select item 148316546017.

rs1483165460 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:4489570 (GRCh38)
11:4510800 (GRCh37)
Canonical SPDI:: NC_000011.10:4489569:C:T
Gene:: OR52K1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000011.10:g.4489570C>T, NC_000011.9:g.4510800C>T, NM_001005171.3:c.670C>T, NM_001005171.2:c.670C>T, NM_001385736.1:c.631C>T, NP_001005171.2:p.Leu224Phe, NP_001372665.1:p.Leu211Phe

Select item 148273251218.

rs1482732512 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:4488358 (GRCh38)
11:4509588 (GRCh37)
Canonical SPDI:: NC_000011.10:4488357:T:A
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.4488358T>A, NC_000011.9:g.4509588T>A

Select item 148270394519.

rs1482703945 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:4489237 (GRCh38)
11:4510467 (GRCh37)
Canonical SPDI:: NC_000011.10:4489236:G:A
Gene:: OR52K1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.4489237G>A, NC_000011.9:g.4510467G>A, NM_001005171.3:c.337G>A, NM_001005171.2:c.337G>A, NM_001385736.1:c.298G>A, NP_001005171.2:p.Glu113Lys, NP_001372665.1:p.Glu100Lys

Select item 148130052820.

rs1481300528 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:4487634 (GRCh38)
11:4508864 (GRCh37)
Canonical SPDI:: NC_000011.10:4487633:T:C
Gene:: OR52K1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.4487634T>C, NC_000011.9:g.4508864T>C

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