SNP Links for Gene (Select 387748) - SNP

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Links from Gene

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Select item 14903451781.

rs1490345178 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5735238 (GRCh38)
11:5756468 (GRCh37)
Canonical SPDI:: NC_000011.10:5735237:C:T
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.5735238C>T, NC_000011.9:g.5756468C>T

Select item 14886064262.

rs1488606426 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5737665 (GRCh38)
11:5758895 (GRCh37)
Canonical SPDI:: NC_000011.10:5737664:A:G
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5737665A>G, NC_000011.9:g.5758895A>G, NM_001005180.3:c.*174A>G

Select item 14877723173.

rs1487772317 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5736163 (GRCh38)
11:5757393 (GRCh37)
Canonical SPDI:: NC_000011.10:5736162:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5736163T>C, NC_000011.9:g.5757393T>C

Select item 14872834454.

rs1487283445 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:5737091 (GRCh38)
11:5758321 (GRCh37)
Canonical SPDI:: NC_000011.10:5737090:G:T
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: missense_variant,genic_upstream_transcript_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5737091G>T, NC_000011.9:g.5758321G>T, NM_001005180.3:c.575G>T, NM_001005180.2:c.575G>T, NP_001005180.1:p.Gly192Val

Select item 14870269035.

rs1487026903 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5736587 (GRCh38)
11:5757817 (GRCh37)
Canonical SPDI:: NC_000011.10:5736586:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: missense_variant,genic_upstream_transcript_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5736587T>C, NC_000011.9:g.5757817T>C, NM_001005180.3:c.71T>C, NM_001005180.2:c.71T>C, NP_001005180.1:p.Leu24Pro

Select item 14848176296.

rs1484817629 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:5736046 (GRCh38)
11:5757276 (GRCh37)
Canonical SPDI:: NC_000011.10:5736045:T:A,NC_000011.10:5736045:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.5736046T>A, NC_000011.10:g.5736046T>C, NC_000011.9:g.5757276T>A, NC_000011.9:g.5757276T>C

Select item 14820061497.

rs1482006149 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5736699 (GRCh38)
11:5757929 (GRCh37)
Canonical SPDI:: NC_000011.10:5736698:C:T
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,synonymous_variant
HGVS:: NC_000011.10:g.5736699C>T, NC_000011.9:g.5757929C>T, NM_001005180.3:c.183C>T, NM_001005180.2:c.183C>T

Select item 14819610428.

rs1481961042 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:5736637 (GRCh38)
11:5757867 (GRCh37)
Canonical SPDI:: NC_000011.10:5736636:G:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.5736637G>C, NC_000011.9:g.5757867G>C, NM_001005180.3:c.121G>C, NM_001005180.2:c.121G>C, NP_001005180.1:p.Ala41Pro

Select item 14816777239.

rs1481677723 has merged into rs1178234504 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 11:5735058 (GRCh38)
11:5756288 (GRCh37)
Canonical SPDI:: NC_000011.10:5735057:TTTTTTT:TTTTTT,NC_000011.10:5735057:TTTTTTT:TTTTTTTT
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0.00005/1 (ALFA)
-=0.00022/1 (Estonian)
-=0.00328/6 (Korea1K)
-=0.00464/78 (TOMMO)
-=0.00467/1 (Vietnamese)
HGVS:: NC_000011.10:g.5735064del, NC_000011.10:g.5735064dup, NC_000011.9:g.5756294del, NC_000011.9:g.5756294dup

Select item 148144058010.

rs1481440580 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5736058 (GRCh38)
11:5757288 (GRCh37)
Canonical SPDI:: NC_000011.10:5736057:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.5736058T>C, NC_000011.9:g.5757288T>C

Select item 148126387611.

rs1481263876 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:5737131 (GRCh38)
11:5758361 (GRCh37)
Canonical SPDI:: NC_000011.10:5737130:C:G
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5737131C>G, NC_000011.9:g.5758361C>G, NM_001005180.3:c.615C>G, NM_001005180.2:c.615C>G, NP_001005180.1:p.Ser205Arg

Select item 148001483412.

rs1480014834 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5737157 (GRCh38)
11:5758387 (GRCh37)
Canonical SPDI:: NC_000011.10:5737156:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.5737157T>C, NC_000011.9:g.5758387T>C, NM_001005180.3:c.641T>C, NM_001005180.2:c.641T>C, NP_001005180.1:p.Leu214Pro

Select item 147915090713.

rs1479150907 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:5734943 (GRCh38)
11:5756173 (GRCh37)
Canonical SPDI:: NC_000011.10:5734942:T:G
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5734943T>G, NC_000011.9:g.5756173T>G

Select item 147868400414.

rs1478684004 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:5734657 (GRCh38)
11:5755887 (GRCh37)
Canonical SPDI:: NC_000011.10:5734656:A:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5734657A>C, NC_000011.9:g.5755887A>C

Select item 147670652115.

rs1476706521 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5736943 (GRCh38)
11:5758173 (GRCh37)
Canonical SPDI:: NC_000011.10:5736942:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.5736943T>C, NC_000011.9:g.5758173T>C, NM_001005180.3:c.427T>C, NM_001005180.2:c.427T>C, NP_001005180.1:p.Ser143Pro

Select item 147601858316.

rs1476018583 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:5735840 (GRCh38)
11:5757070 (GRCh37)
Canonical SPDI:: NC_000011.10:5735839:G:A
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5735840G>A, NC_000011.9:g.5757070G>A

Select item 147596490717.

rs1475964907 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5735999 (GRCh38)
11:5757229 (GRCh37)
Canonical SPDI:: NC_000011.10:5735998:C:T
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5735999C>T, NC_000011.9:g.5757229C>T, XM_017017711.3:c.-113C>T, XM_017017711.2:c.-113C>T, XM_017017711.1:c.-113C>T, XM_017017713.3:c.-81C>T, XM_017017713.2:c.-81C>T, XM_017017713.1:c.-81C>T

Select item 147559449218.

rs1475594492 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:5735325 (GRCh38)
11:5756555 (GRCh37)
Canonical SPDI:: NC_000011.10:5735324:C:T
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.5735325C>T, NC_000011.9:g.5756555C>T

Select item 147478881719.

rs1474788817 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:5736859 (GRCh38)
11:5758089 (GRCh37)
Canonical SPDI:: NC_000011.10:5736858:T:C
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.5736859T>C, NC_000011.9:g.5758089T>C, NM_001005180.3:c.343T>C, NM_001005180.2:c.343T>C, NP_001005180.1:p.Phe115Leu

Select item 147363200020.

rs1473632000 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:5736396 (GRCh38)
11:5757626 (GRCh37)
Canonical SPDI:: NC_000011.10:5736395:A:G
Gene:: OR56B1 (Varview), OR52N4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.5736396A>G, NC_000011.9:g.5757626A>G