SNP Links for Gene (Select 387628) - SNP

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Select item 14914064761.

rs1491406476 has merged into rs1191378860 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,AA,AAA,AAAAA,AAAAAA,AAAAAAA [Show Flanks]
Chromosome:: 9:62426810 (GRCh38)
9:46738111 (GRCh37)
Canonical SPDI:: NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:62426792:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000009.12:g.62426810_62426813del, NC_000009.12:g.62426812_62426813del, NC_000009.12:g.62426813del, NC_000009.12:g.62426813dup, NC_000009.12:g.62426812_62426813dup, NC_000009.12:g.62426811_62426813dup, NC_000009.11:g.46738111_46738114del, NC_000009.11:g.46738113_46738114del, NC_000009.11:g.46738114del, NC_000009.11:g.46738114dup, NC_000009.11:g.46738113_46738114dup, NC_000009.11:g.46738112_46738114dup

Select item 14913254292.

rs1491325429 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 9:62426792 (GRCh38)
9:46738093 (GRCh37)
Canonical SPDI:: NC_000009.12:62426791:CA:
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00422/50 (ALFA)
-=0.00013/3 (TOMMO)
-=0.00304/138 (GnomAD)
HGVS:: NC_000009.12:g.62426792_62426793del, NC_000009.11:g.46738093_46738094del

Select item 14909966273.

rs1490996627 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 9:62421412 (GRCh38)
9:46732713 (GRCh37)
Canonical SPDI:: NC_000009.12:62421411:T:A,NC_000009.12:62421411:T:C
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00025/3 (ALFA)
C=0.00005/1 (TOMMO)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000009.12:g.62421412T>A, NC_000009.12:g.62421412T>C, NC_000009.11:g.46732713T>A, NC_000009.11:g.46732713T>C

Select item 14909547984.

rs1490954798 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62421703 (GRCh38)
9:46733004 (GRCh37)
Canonical SPDI:: NC_000009.12:62421702:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00002/1 (GnomAD)
HGVS:: NC_000009.12:g.62421703A>G, NC_000009.11:g.46733004A>G

Select item 14906276035.

rs1490627603 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62390726 (GRCh38)
9:46702027 (GRCh37)
Canonical SPDI:: NC_000009.12:62390725:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.62390726A>G, NC_000009.11:g.46702027A>G

Select item 14905086476.

rs1490508647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:62426391 (GRCh38)
9:46737692 (GRCh37)
Canonical SPDI:: NC_000009.12:62426390:C:A
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.00094/6 (1000Genomes)
HGVS:: NC_000009.12:g.62426391C>A, NC_000009.11:g.46737692C>A

Select item 14903008617.

rs1490300861 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:62392487 (GRCh38)
9:46703788 (GRCh37)
Canonical SPDI:: NC_000009.12:62392486:T:C
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.62392487T>C, NC_000009.11:g.46703788T>C

Select item 14900979288.

rs1490097928 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62381215 (GRCh38)
9:46692516 (GRCh37)
Canonical SPDI:: NC_000009.12:62381214:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.00017/2 (ALFA)
G=0.00021/5 (GnomAD)
HGVS:: NC_000009.12:g.62381215A>G, NC_000009.11:g.46692516A>G

Select item 14900137589.

rs1490013758 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:62429755 (GRCh38)
9:46741056 (GRCh37)
Canonical SPDI:: NC_000009.12:62429754:C:T
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00062/4 (1000Genomes)
HGVS:: NC_000009.12:g.62429755C>T, NC_000009.11:g.46741056C>T

Select item 148978511210.

rs1489785112 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:62381357 (GRCh38)
9:46692658 (GRCh37)
Canonical SPDI:: NC_000009.12:62381356:C:G,NC_000009.12:62381356:C:T
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.62381357C>G, NC_000009.12:g.62381357C>T, NC_000009.11:g.46692658C>G, NC_000009.11:g.46692658C>T

Select item 148949743411.

rs1489497434 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:62387041 (GRCh38)
9:46698342 (GRCh37)
Canonical SPDI:: NC_000009.12:62387040:C:T
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00056/9 (ALFA)
T=0.00004/1 (TOMMO)
T=0.00032/4 (GnomAD)
T=0.00144/2 (Korea1K)
HGVS:: NC_000009.12:g.62387041C>T, NC_000009.11:g.46698342C>T

Select item 148936831412.

rs1489368314 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:62394777 (GRCh38)
9:46706078 (GRCh37)
Canonical SPDI:: NC_000009.12:62394776:G:A
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00004/1 (TOMMO)
HGVS:: NC_000009.12:g.62394777G>A, NC_000009.11:g.46706078G>A

Select item 148925532013.

rs1489255320 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:62385103 (GRCh38)
9:46696404 (GRCh37)
Canonical SPDI:: NC_000009.12:62385102:T:C
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.62385103T>C, NC_000009.11:g.46696404T>C

Select item 148919796614.

rs1489197966 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:62423212 (GRCh38)
9:46734513 (GRCh37)
Canonical SPDI:: NC_000009.12:62423211:G:A,NC_000009.12:62423211:G:C
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.62423212G>A, NC_000009.12:g.62423212G>C, NC_000009.11:g.46734513G>A, NC_000009.11:g.46734513G>C

Select item 148916875415.

rs1489168754 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62426794 (GRCh38)
9:46738095 (GRCh37)
Canonical SPDI:: NC_000009.12:62426793:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.62426794A>G, NC_000009.11:g.46738095A>G

Select item 148889485716.

rs1488894857 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:62381142 (GRCh38)
9:46692443 (GRCh37)
Canonical SPDI:: NC_000009.12:62381141:C:A
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00014/1 (GnomAD)
HGVS:: NC_000009.12:g.62381142C>A, NC_000009.11:g.46692443C>A

Select item 148874550217.

rs1488745502 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62407904 (GRCh38)
9:46719205 (GRCh37)
Canonical SPDI:: NC_000009.12:62407903:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.00093/11 (ALFA)
G=0.00002/1 (GnomAD)
HGVS:: NC_000009.12:g.62407904A>G, NC_000009.11:g.46719205A>G

Select item 148852196518.

rs1488521965 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 9:62392900 (GRCh38)
9:46704201 (GRCh37)
Canonical SPDI:: NC_000009.12:62392899:G:A,NC_000009.12:62392899:G:T
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.62392900G>A, NC_000009.12:g.62392900G>T, NC_000009.11:g.46704201G>A, NC_000009.11:g.46704201G>T

Select item 148846397219.

rs1488463972 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:62385547 (GRCh38)
9:46696848 (GRCh37)
Canonical SPDI:: NC_000009.12:62385546:C:T
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000482/59 (GnomAD)
T=0.001562/10 (1000Genomes)
HGVS:: NC_000009.12:g.62385547C>T, NC_000009.11:g.46696848C>T

Select item 148835083120.

rs1488350831 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:62390499 (GRCh38)
9:46701800 (GRCh37)
Canonical SPDI:: NC_000009.12:62390498:A:G
Gene:: FGF7P6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.62390499A>G, NC_000009.11:g.46701800A>G

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