SNP Links for Gene (Select 374890) - SNP

Links from Gene

Items: 1 to 20 of 2673

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Select item 14912453541.

rs1491245354 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 19:22622688 (GRCh38)
19:22805490 (GRCh37)
Canonical SPDI:: NC_000019.10:22622687:CA:
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00051/6 (ALFA)
-=0.00066/17 (TOMMO)
HGVS:: NC_000019.10:g.22622688_22622689del, NC_000019.9:g.22805490_22805491del

Select item 14912384202.

rs1491238420 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CAAA [Show Flanks]
Chromosome:: 19:22622688 (GRCh38)
19:22805491 (GRCh37)
Canonical SPDI:: NC_000019.10:22622688:AA:AACAAA
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AACAAA=0./0 (ALFA)
AACA=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.22622690_22622691insCAAA, NC_000019.9:g.22805492_22805493insCAAA

Select item 14908726183.

rs1490872618 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22616540 (GRCh38)
19:22799342 (GRCh37)
Canonical SPDI:: NC_000019.10:22616539:G:A
Gene:: LINC01785 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.22616540G>A, NC_000019.9:g.22799342G>A, NR_135233.1:n.129C>T

Select item 14904985384.

rs1490498538 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22616129 (GRCh38)
19:22798931 (GRCh37)
Canonical SPDI:: NC_000019.10:22616128:G:A
Gene:: LINC01785 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000042/11 (TOPMED)
HGVS:: NC_000019.10:g.22616129G>A, NC_000019.9:g.22798931G>A, NR_135233.1:n.540C>T

Select item 14901541345.

rs1490154134 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22623348 (GRCh38)
19:22806150 (GRCh37)
Canonical SPDI:: NC_000019.10:22623347:G:A
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00003/8 (TOPMED)
A=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.22623348G>A, NC_000019.9:g.22806150G>A

Select item 14894178406.

rs1489417840 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:22615719 (GRCh38)
19:22798521 (GRCh37)
Canonical SPDI:: NC_000019.10:22615718:C:G,NC_000019.10:22615718:C:T
Gene:: LINC01785 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22615719C>G, NC_000019.10:g.22615719C>T, NC_000019.9:g.22798521C>G, NC_000019.9:g.22798521C>T, NR_135233.1:n.950G>C, NR_135233.1:n.950G>A

Select item 14892947237.

rs1489294723 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 19:22623835 (GRCh38)
19:22806637 (GRCh37)
Canonical SPDI:: NC_000019.10:22623834:GGGG:GGG
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGG=0.000071/1 (ALFA)
-=0.000038/10 (TOPMED)
-=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.22623838del, NC_000019.9:g.22806640del

Select item 14892645398.

rs1489264539 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 19:22622039 (GRCh38)
19:22804841 (GRCh37)
Canonical SPDI:: NC_000019.10:22622038:AG:
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22622039_22622040del, NC_000019.9:g.22804841_22804842del

Select item 14891457099.

rs1489145709 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22621294 (GRCh38)
19:22804096 (GRCh37)
Canonical SPDI:: NC_000019.10:22621293:G:A
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22621294G>A, NC_000019.9:g.22804096G>A

Select item 148833040310.

rs1488330403 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:22618564 (GRCh38)
19:22801366 (GRCh37)
Canonical SPDI:: NC_000019.10:22618563:C:T
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22618564C>T, NC_000019.9:g.22801366C>T

Select item 148804806711.

rs1488048067 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:22623442 (GRCh38)
19:22806244 (GRCh37)
Canonical SPDI:: NC_000019.10:22623441:A:G
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.002056/6 (KOREAN)
G=0.005379/90 (TOMMO)
HGVS:: NC_000019.10:g.22623442A>G, NC_000019.9:g.22806244A>G

Select item 148772237312.

rs1487722373 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:22615743 (GRCh38)
19:22798545 (GRCh37)
Canonical SPDI:: NC_000019.10:22615742:G:T
Gene:: LINC01785 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22615743G>T, NC_000019.9:g.22798545G>T, NR_135233.1:n.926C>A

Select item 148746067513.

rs1487460675 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:22621199 (GRCh38)
19:22804001 (GRCh37)
Canonical SPDI:: NC_000019.10:22621198:G:C
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22621199G>C, NC_000019.9:g.22804001G>C

Select item 148733558714.

rs1487335587 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:22625708 (GRCh38)
19:22808510 (GRCh37)
Canonical SPDI:: NC_000019.10:22625707:C:A,NC_000019.10:22625707:C:T
Gene:: LINC01785 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22625708C>A, NC_000019.10:g.22625708C>T, NC_000019.9:g.22808510C>A, NC_000019.9:g.22808510C>T

Select item 148725244815.

rs1487252448 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:22623116 (GRCh38)
19:22805918 (GRCh37)
Canonical SPDI:: NC_000019.10:22623115:G:A,NC_000019.10:22623115:G:T
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00125/8 (1000Genomes)
A=0.0098/28 (KOREAN)
A=0.01295/217 (TOMMO)
G=0.5/2 (SGDP_PRJ)
HGVS:: NC_000019.10:g.22623116G>A, NC_000019.10:g.22623116G>T, NC_000019.9:g.22805918G>A, NC_000019.9:g.22805918G>T

Select item 148718580216.

rs1487185802 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:22622178 (GRCh38)
19:22804980 (GRCh37)
Canonical SPDI:: NC_000019.10:22622177:T:C
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000019.10:g.22622178T>C, NC_000019.9:g.22804980T>C

Select item 148654543617.

rs1486545436 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTTA>- [Show Flanks]
Chromosome:: 19:22622737 (GRCh38)
19:22805539 (GRCh37)
Canonical SPDI:: NC_000019.10:22622734:TAGTTA:TA
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TA=0./0 (ALFA)
-=0.000037/5 (GnomAD)
HGVS:: NC_000019.10:g.22622737_22622740del, NC_000019.9:g.22805539_22805542del

Select item 148642166618.

rs1486421666 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:22625381 (GRCh38)
19:22808183 (GRCh37)
Canonical SPDI:: NC_000019.10:22625380:T:G
Gene:: LINC01785 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22625381T>G, NC_000019.9:g.22808183T>G

Select item 148637368919.

rs1486373689 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 19:22621114 (GRCh38)
19:22803916 (GRCh37)
Canonical SPDI:: NC_000019.10:22621113:G:C,NC_000019.10:22621113:G:T
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
T=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22621114G>C, NC_000019.10:g.22621114G>T, NC_000019.9:g.22803916G>C, NC_000019.9:g.22803916G>T

Select item 148634494220.

rs1486344942 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 19:22619176 (GRCh38)
19:22801978 (GRCh37)
Canonical SPDI:: NC_000019.10:22619175:T:A,NC_000019.10:22619175:T:C
Gene:: LINC01785 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
C=0.00002/2 (GnomAD)
HGVS:: NC_000019.10:g.22619176T>A, NC_000019.10:g.22619176T>C, NC_000019.9:g.22801978T>A, NC_000019.9:g.22801978T>C

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