SNP Links for Gene (Select 3654) - SNP

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Select item 14905336011.

rs1490533601 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:154017459 (GRCh38)
X:153282910 (GRCh37)
Canonical SPDI:: NC_000023.11:154017458:G:A
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.154017459G>A, NW_003871103.3:g.1451438G>A, NG_008387.1:g.7433C>T, NC_000023.10:g.153282910G>A

Select item 14904996382.

rs1490499638 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:154018492 (GRCh38)
X:153283943 (GRCh37)
Canonical SPDI:: NC_000023.11:154018491:G:A,NC_000023.11:154018491:G:C
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154018492G>A, NC_000023.11:g.154018492G>C, NW_003871103.3:g.1452471G>A, NW_003871103.3:g.1452471G>C, NG_008387.1:g.6400C>T, NG_008387.1:g.6400C>G, NC_000023.10:g.153283943G>A, NC_000023.10:g.153283943G>C

Select item 14896307803.

rs1489630780 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:154016891 (GRCh38)
X:153282342 (GRCh37)
Canonical SPDI:: NC_000023.11:154016890:C:A
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000019/2 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.154016891C>A, NW_003871103.3:g.1450870C>A, NG_008387.1:g.8001G>T, NC_000023.10:g.153282342C>A

Select item 14894459934.

rs1489445993 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:154021550 (GRCh38)
X:153287001 (GRCh37)
Canonical SPDI:: NC_000023.11:154021549:A:G
Gene:: IRAK1 (Varview), MECP2 (Varview), MIR718 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.154021550A>G, NW_003871103.3:g.1455529A>G, NG_007107.3:g.120554T>C, NG_008387.1:g.3342T>C, NC_000023.10:g.153287001A>G

Select item 14891669175.

rs1489166917 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: X:154010878 (GRCh38)
X:153276329 (GRCh37)
Canonical SPDI:: NC_000023.11:154010877:C:A,NC_000023.11:154010877:C:G
Gene:: IRAK1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154010878C>A, NC_000023.11:g.154010878C>G, NW_003871103.3:g.1444857C>A, NW_003871103.3:g.1444857C>G, NG_008387.1:g.14014G>T, NG_008387.1:g.14014G>C, NM_001569.4:c.*981G>T, NM_001569.4:c.*981G>C, NM_001569.3:c.*981G>T, NM_001569.3:c.*981G>C, NM_001025242.2:c.*981G>T, NM_001025242.2:c.*981G>C, NM_001025242.1:c.*981G>T, NM_001025242.1:c.*981G>C, NM_001025243.2:c.*981G>T, NM_001025243.2:c.*981G>C, NM_001025243.1:c.*981G>T, NM_001025243.1:c.*981G>C, NM_001410701.1:c.*981G>T, NM_001410701.1:c.*981G>C, NC_000023.10:g.153276329C>A, NC_000023.10:g.153276329C>G, XM_005274668.5:c.*981G>T, XM_005274668.5:c.*981G>C, XM_047442097.1:c.*981G>T, XM_047442097.1:c.*981G>C, XM_047442098.1:c.*981G>T, XM_047442098.1:c.*981G>C

Select item 14890359816.

rs1489035981 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:154012179 (GRCh38)
X:153277630 (GRCh37)
Canonical SPDI:: NC_000023.11:154012178:G:A
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000019/2 (GnomAD)
A=0.00009/1 (TOMMO)
HGVS:: NC_000023.11:g.154012179G>A, NW_003871103.3:g.1446158G>A, NG_008387.1:g.12713C>T, NC_000023.10:g.153277630G>A

Select item 14889082007.

rs1488908200 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:154014813 (GRCh38)
X:153280264 (GRCh37)
Canonical SPDI:: NC_000023.11:154014812:A:G
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.154014813A>G, NW_003871103.3:g.1448792A>G, NG_008387.1:g.10079T>C, NC_000023.10:g.153280264A>G

Select item 14888382038.

rs1488838203 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:154010289 (GRCh38)
X:153275740 (GRCh37)
Canonical SPDI:: NC_000023.11:154010288:T:C
Gene:: IRAK1 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154010289T>C, NW_003871103.3:g.1444268T>C, NG_008387.1:g.14603A>G, NC_000023.10:g.153275740T>C

Select item 14887192269.

rs1488719226 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:154021083 (GRCh38)
X:153286534 (GRCh37)
Canonical SPDI:: NC_000023.11:154021082:G:A
Gene:: IRAK1 (Varview), MECP2 (Varview), MIR718 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000057/15 (TOPMED)
HGVS:: NC_000023.11:g.154021083G>A, NW_003871103.3:g.1455062G>A, NG_007107.3:g.121021C>T, NG_008387.1:g.3809C>T, NC_000023.10:g.153286534G>A

Select item 148870583210.

rs1488705832 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:154011652 (GRCh38)
X:153277103 (GRCh37)
Canonical SPDI:: NC_000023.11:154011651:C:T
Gene:: IRAK1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.154011652C>T, NW_003871103.3:g.1445631C>T, NG_008387.1:g.13240G>A, NM_001569.4:c.*207G>A, NM_001569.3:c.*207G>A, NM_001025242.2:c.*207G>A, NM_001025242.1:c.*207G>A, NM_001025243.2:c.*207G>A, NM_001025243.1:c.*207G>A, NM_001410701.1:c.*207G>A, NC_000023.10:g.153277103C>T, XM_005274668.5:c.*207G>A, XM_047442097.1:c.*207G>A, XM_047442098.1:c.*207G>A

Select item 148864726911.

rs1488647269 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:154019928 (GRCh38)
X:153285379 (GRCh37)
Canonical SPDI:: NC_000023.11:154019927:C:G
Gene:: IRAK1 (Varview), MIR718 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154019928C>G, NW_003871103.3:g.1453907C>G, NG_007107.3:g.122176G>C, NG_008387.1:g.4964G>C, NC_000023.10:g.153285379C>G, NR_031757.1:n.62G>C

Select item 148794191912.

rs1487941919 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:154019877 (GRCh38)
X:153285328 (GRCh37)
Canonical SPDI:: NC_000023.11:154019876:C:T
Gene:: IRAK1 (Varview), MIR718 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.154019877C>T, NW_003871103.3:g.1453856C>T, NG_007107.3:g.122227G>A, NG_008387.1:g.5015G>A, NM_001569.4:c.-65G>A, NM_001569.3:c.-65G>A, NM_001025242.2:c.-65G>A, NM_001025242.1:c.-65G>A, NM_001025243.2:c.-65G>A, NM_001025243.1:c.-65G>A, NM_001410701.1:c.-65G>A, NC_000023.10:g.153285328C>T, XM_005274668.5:c.-65G>A, XM_047442097.1:c.-65G>A, XM_047442098.1:c.-65G>A

Select item 148788374213.

rs1487883742 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:154011018 (GRCh38)
X:153276469 (GRCh37)
Canonical SPDI:: NC_000023.11:154011017:G:A
Gene:: IRAK1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.154011018G>A, NW_003871103.3:g.1444997G>A, NG_008387.1:g.13874C>T, NM_001569.4:c.*841C>T, NM_001569.3:c.*841C>T, NM_001025242.2:c.*841C>T, NM_001025242.1:c.*841C>T, NM_001025243.2:c.*841C>T, NM_001025243.1:c.*841C>T, NM_001410701.1:c.*841C>T, NC_000023.10:g.153276469G>A, XM_005274668.5:c.*841C>T, XM_047442097.1:c.*841C>T, XM_047442098.1:c.*841C>T

Select item 148780860214.

rs1487808602 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:154020953 (GRCh38)
X:153286404 (GRCh37)
Canonical SPDI:: NC_000023.11:154020952:G:C
Gene:: IRAK1 (Varview), MIR718 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000101/10 (GnomAD)
C=0.000113/30 (TOPMED)
HGVS:: NC_000023.11:g.154020953G>C, NW_003871103.3:g.1454932G>C, NG_007107.3:g.121151C>G, NG_008387.1:g.3939C>G, NC_000023.10:g.153286404G>C

Select item 148765050215.

rs1487650502 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:154010567 (GRCh38)
X:153276018 (GRCh37)
Canonical SPDI:: NC_000023.11:154010566:G:A
Gene:: IRAK1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.154010567G>A, NW_003871103.3:g.1444546G>A, NG_008387.1:g.14325C>T, NM_001569.4:c.*1292C>T, NM_001569.3:c.*1292C>T, NM_001025242.2:c.*1292C>T, NM_001025242.1:c.*1292C>T, NM_001025243.2:c.*1292C>T, NM_001025243.1:c.*1292C>T, NM_001410701.1:c.*1292C>T, NC_000023.10:g.153276018G>A, XM_005274668.5:c.*1292C>T, XM_047442097.1:c.*1292C>T, XM_047442098.1:c.*1292C>T

Select item 148761036016.

rs1487610360 [Homo sapiens]

Variant type:: INS
Alleles:: ->AGCC [Show Flanks]
Chromosome:: X:154019148 (GRCh38)
X:153284600 (GRCh37)
Canonical SPDI:: NC_000023.11:154019148::AGCC
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGCC=0./0 (ALFA)
AGCC=0.000004/1 (TOPMED)
AGCC=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154019148_154019149insAGCC, NW_003871103.3:g.1453127_1453128insAGCC, NG_008387.1:g.5743_5744insGGCT, NC_000023.10:g.153284599_153284600insAGCC

Select item 148747717017.

rs1487477170 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:154020300 (GRCh38)
X:153285751 (GRCh37)
Canonical SPDI:: NC_000023.11:154020299:C:T
Gene:: IRAK1 (Varview), MIR718 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.154020300C>T, NW_003871103.3:g.1454279C>T, NG_007107.3:g.121804G>A, NG_008387.1:g.4592G>A, NC_000023.10:g.153285751C>T

Select item 148654955418.

rs1486549554 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:154013406 (GRCh38)
X:153278857 (GRCh37)
Canonical SPDI:: NC_000023.11:154013405:C:G,NC_000023.11:154013405:C:T
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.154013406C>G, NC_000023.11:g.154013406C>T, NW_003871103.3:g.1447385C>G, NW_003871103.3:g.1447385C>T, NG_008387.1:g.11486G>C, NG_008387.1:g.11486G>A, NM_001569.4:c.1567G>C, NM_001569.4:c.1567G>A, NM_001569.3:c.1567G>C, NM_001569.3:c.1567G>A, NM_001025243.2:c.1330G>C, NM_001025243.2:c.1330G>A, NM_001025243.1:c.1330G>C, NM_001025243.1:c.1330G>A, NC_000023.10:g.153278857C>G, NC_000023.10:g.153278857C>T, XM_047442097.1:c.1522G>C, XM_047442097.1:c.1522G>A, NP_001560.2:p.Ala523Pro, NP_001560.2:p.Ala523Thr, NP_001020414.1:p.Ala444Pro, NP_001020414.1:p.Ala444Thr, XP_047298053.1:p.Ala508Pro, XP_047298053.1:p.Ala508Thr

Select item 148579167919.

rs1485791679 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:154013528 (GRCh38)
X:153278979 (GRCh37)
Canonical SPDI:: NC_000023.11:154013527:C:T
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.154013528C>T, NW_003871103.3:g.1447507C>T, NG_008387.1:g.11364G>A, NC_000023.10:g.153278979C>T

Select item 148570119320.

rs1485701193 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:154014488 (GRCh38)
X:153279939 (GRCh37)
Canonical SPDI:: NC_000023.11:154014487:T:C
Gene:: IRAK1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.154014488T>C, NW_003871103.3:g.1448467T>C, NG_008387.1:g.10404A>G, NC_000023.10:g.153279939T>C

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