SNP Links for Gene (Select 3574) - SNP

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14915825521.

rs1491582552 [Homo sapiens]

Variant type:: INS
Alleles:: ->GACTTTA [Show Flanks]
Chromosome:: 8:78757655 (GRCh38)
8:79669891 (GRCh37)
Canonical SPDI:: NC_000008.11:78757655::GACTTTA
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GACTTTA=0./0 (ALFA)
GACTTTA=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.78757655_78757656insGACTTTA, NC_000008.10:g.79669890_79669891insGACTTTA

Select item 14915807002.

rs1491580700 has merged into rs200421095 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATA>-,TA,TATATA,TATATAATAAATTATATATATTTATATAAATATATATA [Show Flanks]
Chromosome:: 8:78687916 (GRCh38)
8:79600151 (GRCh37)
Canonical SPDI:: NC_000008.11:78687912:ATATATA:ATA,NC_000008.11:78687912:ATATATA:ATATA,NC_000008.11:78687912:ATATATA:ATATATATA,NC_000008.11:78687912:ATATATA:ATATATATAATAAATTATATATATTTATATAAATATATATA
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATA=0./0 (ALFA)
-=0.14672/2363 (TOMMO)
-=0.26018/1303 (1000Genomes)
HGVS:: NC_000008.11:g.78687914TA[1], NC_000008.11:g.78687914TA[2], NC_000008.11:g.78687914TA[4], NC_000008.11:g.78687913_78687919AT[4]AATAAATTATATATATTTATATAAATATATATA[1], NC_000008.10:g.79600149TA[1], NC_000008.10:g.79600149TA[2], NC_000008.10:g.79600149TA[4], NC_000008.10:g.79600148_79600154AT[4]AATAAATTATATATATTTATATAAATATATATA[1]

Select item 14915593633.

Error occurred: cannot get document summary

Select item 14914390474.

rs1491439047 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 8:78735277 (GRCh38)
8:79647513 (GRCh37)
Canonical SPDI:: NC_000008.11:78735277::C
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000008.11:g.78735277_78735278insC, NC_000008.10:g.79647512_79647513insC

Select item 14913947135.

rs1491394713 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 8:78688695 (GRCh38)
8:79600931 (GRCh37)
Canonical SPDI:: NC_000008.11:78688695:T:TT
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.78688696dup, NC_000008.10:g.79600931dup

Select item 14913895146.

rs1491389514 has merged into rs3071074 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT [Show Flanks]
Chromosome:: 8:78759227 (GRCh38)
8:79671462 (GRCh37)
Canonical SPDI:: NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000008.11:78759216:TTTTTTTTTTTT:TTTTTTTTTTTTTTTTT
Gene:: IL7 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000008.11:g.78759227_78759228del, NC_000008.11:g.78759228del, NC_000008.11:g.78759228dup, NC_000008.11:g.78759227_78759228dup, NC_000008.11:g.78759226_78759228dup, NC_000008.11:g.78759225_78759228dup, NC_000008.11:g.78759224_78759228dup, NC_000008.10:g.79671462_79671463del, NC_000008.10:g.79671463del, NC_000008.10:g.79671463dup, NC_000008.10:g.79671462_79671463dup, NC_000008.10:g.79671461_79671463dup, NC_000008.10:g.79671460_79671463dup, NC_000008.10:g.79671459_79671463dup

Select item 14912831617.

rs1491283161 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 8:78688699 (GRCh38)
8:79600934 (GRCh37)
Canonical SPDI:: NC_000008.11:78688694:ATATAT:ATAT
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATAT=0./0 (ALFA)
-=0.00007/1 (TOMMO)
HGVS:: NC_000008.11:g.78688695AT[2], NC_000008.10:g.79600930AT[2]

Select item 14911816358.

rs1491181635 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->T
Chromosome:: no mapping
Canonical SPDI:

Select item 14911478059.

rs1491147805 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CT [Show Flanks]
Chromosome:: 8:78759217 (GRCh38)
8:79671453 (GRCh37)
Canonical SPDI:: NC_000008.11:78759217:T:TCT
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCT=0./0 (ALFA)
TC=0.00003/2 (GnomAD)
HGVS:: NC_000008.11:g.78759218_78759219insCT, NC_000008.10:g.79671453_79671454insCT

Select item 149113372310.

rs1491133723 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 8:78686425 (GRCh38)
8:79598660 (GRCh37)
Canonical SPDI:: NC_000008.11:78686424:CT:
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000027/3 (GnomAD)
-=0.000042/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.78686425_78686426del, NC_000008.10:g.79598660_79598661del

Select item 149108570411.

rs1491085704 has merged into rs35093575 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 8:78742172 (GRCh38)
8:79654407 (GRCh37)
Canonical SPDI:: NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000008.11:78742157:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAAAA=0.0002/2 (ALFA)
HGVS:: NC_000008.11:g.78742172_78742174del, NC_000008.11:g.78742173_78742174del, NC_000008.11:g.78742174del, NC_000008.11:g.78742174dup, NC_000008.11:g.78742173_78742174dup, NC_000008.11:g.78742172_78742174dup, NC_000008.10:g.79654407_79654409del, NC_000008.10:g.79654408_79654409del, NC_000008.10:g.79654409del, NC_000008.10:g.79654409dup, NC_000008.10:g.79654408_79654409dup, NC_000008.10:g.79654407_79654409dup

Select item 149108222212.

rs1491082222 has merged into rs200930977 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAA [Show Flanks]
Chromosome:: 8:78751103 (GRCh38)
8:79663338 (GRCh37)
Canonical SPDI:: NC_000008.11:78751091:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000008.11:78751091:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000008.11:78751091:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000008.11:78751091:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA
Gene:: IL7 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0.00049/5 (ALFA)
-=0.15615/579 (TWINSUK)
-=0.15698/605 (ALSPAC)
HGVS:: NC_000008.11:g.78751103_78751104del, NC_000008.11:g.78751104del, NC_000008.11:g.78751104dup, NC_000008.11:g.78751103_78751104dup, NC_000008.10:g.79663338_79663339del, NC_000008.10:g.79663339del, NC_000008.10:g.79663339dup, NC_000008.10:g.79663338_79663339dup

Select item 149107868613.

rs1491078686 has merged into rs35466249 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTT [Show Flanks]
Chromosome:: 8:78762662 (GRCh38)
8:79674897 (GRCh37)
Canonical SPDI:: NC_000008.11:78762652:TTTTTTTTTTT:TTTTTTTTT,NC_000008.11:78762652:TTTTTTTTTTT:TTTTTTTTTT,NC_000008.11:78762652:TTTTTTTTTTT:TTTTTTTTTTTT,NC_000008.11:78762652:TTTTTTTTTTT:TTTTTTTTTTTTT,NC_000008.11:78762652:TTTTTTTTTTT:TTTTTTTTTTTTTT
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.3814/1649 (1000Genomes)
HGVS:: NC_000008.11:g.78762662_78762663del, NC_000008.11:g.78762663del, NC_000008.11:g.78762663dup, NC_000008.11:g.78762662_78762663dup, NC_000008.11:g.78762661_78762663dup, NC_000008.10:g.79674897_79674898del, NC_000008.10:g.79674898del, NC_000008.10:g.79674898dup, NC_000008.10:g.79674897_79674898dup, NC_000008.10:g.79674896_79674898dup, NG_026040.5:g.28_29del, NG_026040.5:g.29del, NG_026040.5:g.29dup, NG_026040.5:g.28_29dup, NG_026040.5:g.27_29dup

Select item 149107386114.

rs1491073861 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 8:78735264 (GRCh38)
8:79647499 (GRCh37)
Canonical SPDI:: NC_000008.11:78735262:TAT:T
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.78735264_78735265del, NC_000008.10:g.79647499_79647500del

Select item 149103106615.

rs1491031066 [Homo sapiens]

Variant type:: INS
Alleles:: ->G,T [Show Flanks]
Chromosome:: 8:78717504 (GRCh38)
8:79629740 (GRCh37)
Canonical SPDI:: NC_000008.11:78717504::G,NC_000008.11:78717504::T
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant,3_prime_UTR_variant
Validated:: by frequency,by cluster
MAF:: G=0.00011/3 (TOMMO)
HGVS:: NC_000008.11:g.78717504_78717505insG, NC_000008.11:g.78717504_78717505insT, NC_000008.10:g.79629739_79629740insG, NC_000008.10:g.79629739_79629740insT, NM_016010.3:c.*11_*12insG, NM_016010.3:c.*11_*12insT, NM_016010.2:c.*11_*12insG, NM_016010.2:c.*11_*12insT, NR_156423.2:n.1239_1240insG, NR_156423.2:n.1239_1240insT, NR_156423.1:n.1281_1282insG, NR_156423.1:n.1281_1282insT, NM_001362969.2:c.*11_*12insG, NM_001362969.2:c.*11_*12insT, NM_001362969.1:c.*11_*12insG, NM_001362969.1:c.*11_*12insT

Select item 149102181416.

rs1491021814 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 8:78735293 (GRCh38)
8:79647528 (GRCh37)
Canonical SPDI:: NC_000008.11:78735291:TGT:T
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.78735293_78735294del, NC_000008.10:g.79647528_79647529del

Select item 149101091817.

rs1491010918 has merged into rs35710652 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 8:78703549 (GRCh38)
8:79615784 (GRCh37)
Canonical SPDI:: NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000008.11:78703536:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.25/10 (GENOME_DK)
-=0.3131/1568 (1000Genomes)
HGVS:: NC_000008.11:g.78703549_78703552del, NC_000008.11:g.78703550_78703552del, NC_000008.11:g.78703551_78703552del, NC_000008.11:g.78703552del, NC_000008.11:g.78703552dup, NC_000008.11:g.78703551_78703552dup, NC_000008.11:g.78703550_78703552dup, NC_000008.11:g.78703552_78703553insTTTTTTTTTTTTTTTTT, NC_000008.10:g.79615784_79615787del, NC_000008.10:g.79615785_79615787del, NC_000008.10:g.79615786_79615787del, NC_000008.10:g.79615787del, NC_000008.10:g.79615787dup, NC_000008.10:g.79615786_79615787dup, NC_000008.10:g.79615785_79615787dup, NC_000008.10:g.79615787_79615788insTTTTTTTTTTTTTTTTT

Select item 149098879618.

rs1490988796 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:78752336 (GRCh38)
8:79664571 (GRCh37)
Canonical SPDI:: NC_000008.11:78752335:G:A
Gene:: IL7 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.78752336G>A, NC_000008.10:g.79664571G>A

Select item 149094989219.

rs1490949892 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTC>- [Show Flanks]
Chromosome:: 8:78802682 (GRCh38)
8:79714917 (GRCh37)
Canonical SPDI:: NC_000008.11:78802680:CCTC:C
Gene:: IL7 (Varview), LOC105375914 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.78802682_78802684del, NC_000008.10:g.79714917_79714919del

Select item 149094629920.

rs1490946299 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 8:78680316 (GRCh38)
8:79592551 (GRCh37)
Canonical SPDI:: NC_000008.11:78680315:G:
Gene:: IL7 (Varview), ZC2HC1A (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000008.11:g.78680316del, NC_000008.10:g.79592551del

<< First< Prev

Page of 50

Next >Last >>

dbSNP

Result Filters

Clinical Significance

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1000

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity