SNP Links for Gene (Select 3448) - SNP

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Select item 14910701761.

rs1491070176 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 9:21240629 (GRCh38)
9:21240628 (GRCh37)
Canonical SPDI:: NC_000009.12:21240627:AGA:A
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.00032/9 (TOMMO)
HGVS:: NC_000009.12:g.21240629_21240630del, NC_000009.11:g.21240628_21240629del

Select item 14900319802.

rs1490031980 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:21240164 (GRCh38)
9:21240163 (GRCh37)
Canonical SPDI:: NC_000009.12:21240163:C:A
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.21240164C>A, NC_000009.11:g.21240163C>A

Select item 14896575393.

rs1489657539 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:21239865 (GRCh38)
9:21239864 (GRCh37)
Canonical SPDI:: NC_000009.12:21239864:C:T
Gene:: IFNA14 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.21239865C>T, NC_000009.11:g.21239864C>T, NM_002172.3:c.71G>A, NM_002172.2:c.71G>A, NP_002163.2:p.Cys24Tyr

Select item 14893611484.

rs1489361148 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21240189 (GRCh38)
9:21240188 (GRCh37)
Canonical SPDI:: NC_000009.12:21240188:T:C
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21240189T>C, NC_000009.11:g.21240188T>C

Select item 14893083115.

rs1489308311 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21241038 (GRCh38)
9:21241037 (GRCh37)
Canonical SPDI:: NC_000009.12:21241037:T:C
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21241038T>C, NC_000009.11:g.21241037T>C

Select item 14886124326.

rs1488612432 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21241150 (GRCh38)
9:21241149 (GRCh37)
Canonical SPDI:: NC_000009.12:21241149:G:A
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.21241150G>A, NC_000009.11:g.21241149G>A

Select item 14884613237.

rs1488461323 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:21238925 (GRCh38)
9:21238924 (GRCh37)
Canonical SPDI:: NC_000009.12:21238924:C:A,NC_000009.12:21238924:C:T
Gene:: IFNA14 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21238925C>A, NC_000009.12:g.21238925C>T, NC_000009.11:g.21238924C>A, NC_000009.11:g.21238924C>T

Select item 14882882458.

rs1488288245 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 9:21241523 (GRCh38)
9:21241522 (GRCh37)
Canonical SPDI:: NC_000009.12:21241522:A:C,NC_000009.12:21241522:A:G
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21241523A>C, NC_000009.12:g.21241523A>G, NC_000009.11:g.21241522A>C, NC_000009.11:g.21241522A>G

Select item 14882616859.

rs1488261685 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21240964 (GRCh38)
9:21240963 (GRCh37)
Canonical SPDI:: NC_000009.12:21240963:T:C
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21240964T>C, NC_000009.11:g.21240963T>C

Select item 148770439410.

rs1487704394 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:21239490 (GRCh38)
9:21239489 (GRCh37)
Canonical SPDI:: NC_000009.12:21239489:C:G,NC_000009.12:21239489:C:T
Gene:: IFNA14 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21239490C>G, NC_000009.12:g.21239490C>T, NC_000009.11:g.21239489C>G, NC_000009.11:g.21239489C>T, NM_002172.3:c.446G>C, NM_002172.3:c.446G>A, NM_002172.2:c.446G>C, NM_002172.2:c.446G>A, NP_002163.2:p.Arg149Thr, NP_002163.2:p.Arg149Lys

Select item 148501273411.

rs1485012734 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 9:21240723 (GRCh38)
9:21240722 (GRCh37)
Canonical SPDI:: NC_000009.12:21240719:TGTGT:TGT
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TGT=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.21240721GT[1], NC_000009.11:g.21240720GT[1]

Select item 148359671412.

rs1483596714 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:21238918 (GRCh38)
9:21238917 (GRCh37)
Canonical SPDI:: NC_000009.12:21238917:A:C
Gene:: IFNA14 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000034/9 (TOPMED)
HGVS:: NC_000009.12:g.21238918A>C, NC_000009.11:g.21238917A>C

Select item 148220139513.

rs1482201395 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:21239793 (GRCh38)
9:21239792 (GRCh37)
Canonical SPDI:: NC_000009.12:21239792:G:T
Gene:: IFNA14 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.21239793G>T, NC_000009.11:g.21239792G>T, NM_002172.3:c.143C>A, NM_002172.2:c.143C>A, NP_002163.2:p.Ser48Tyr

Select item 148194921914.

rs1481949219 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:21239128 (GRCh38)
9:21239127 (GRCh37)
Canonical SPDI:: NC_000009.12:21239127:A:G
Gene:: IFNA14 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.21239128A>G, NC_000009.11:g.21239127A>G, NM_002172.3:c.*238T>C

Select item 148160942915.

rs1481609429 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:21239400 (GRCh38)
9:21239399 (GRCh37)
Canonical SPDI:: NC_000009.12:21239399:G:T
Gene:: IFNA14 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.0002/2 (ALFA)
HGVS:: NC_000009.12:g.21239400G>T, NC_000009.11:g.21239399G>T, NM_002172.3:c.536C>A, NM_002172.2:c.536C>A, NP_002163.2:p.Thr179Lys

Select item 148138340716.

rs1481383407 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:21240772 (GRCh38)
9:21240771 (GRCh37)
Canonical SPDI:: NC_000009.12:21240771:C:T
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.21240772C>T, NC_000009.11:g.21240771C>T

Select item 148127323617.

rs1481273236 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21239455 (GRCh38)
9:21239454 (GRCh37)
Canonical SPDI:: NC_000009.12:21239454:G:A
Gene:: IFNA14 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21239455G>A, NC_000009.11:g.21239454G>A, NM_002172.3:c.481C>T, NM_002172.2:c.481C>T, NP_002163.2:p.Pro161Ser

Select item 148104514018.

rs1481045140 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:21241568 (GRCh38)
9:21241567 (GRCh37)
Canonical SPDI:: NC_000009.12:21241567:A:G
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.21241568A>G, NC_000009.11:g.21241567A>G

Select item 148101619319.

rs1481016193 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:21240094 (GRCh38)
9:21240093 (GRCh37)
Canonical SPDI:: NC_000009.12:21240093:T:A
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000009.12:g.21240094T>A, NC_000009.11:g.21240093T>A

Select item 148034243020.

rs1480342430 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A,AA [Show Flanks]
Chromosome:: 9:21241834 (GRCh38)
9:21241834 (GRCh37)
Canonical SPDI:: NC_000009.12:21241834:A:AA,NC_000009.12:21241834:A:AAA
Gene:: IFNA14 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAA=0./0 (ALFA)
AA=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.21241835dup, NC_000009.12:g.21241835_21241836insAA, NC_000009.11:g.21241834dup, NC_000009.11:g.21241834_21241835insAA

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