Links from Gene
Items: 1 to 20 of 10150
4.
rs1491275128 has merged into rs371289786 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACACACACACACACACACACACACACACACACACA>-,CACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 15:81372363
(GRCh38)
15:81664704
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000015.10:81372349:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACACACA=0./0
(
ALFA)
ACACACACAC=0.3726/1866
(1000Genomes)
- HGVS:
NC_000015.10:g.81372351CA[6], NC_000015.10:g.81372351CA[9], NC_000015.10:g.81372351CA[11], NC_000015.10:g.81372351CA[12], NC_000015.10:g.81372351CA[13], NC_000015.10:g.81372351CA[14], NC_000015.10:g.81372351CA[15], NC_000015.10:g.81372351CA[16], NC_000015.10:g.81372351CA[17], NC_000015.10:g.81372351CA[18], NC_000015.10:g.81372351CA[19], NC_000015.10:g.81372351CA[20], NC_000015.10:g.81372351CA[21], NC_000015.10:g.81372351CA[22], NC_000015.10:g.81372351CA[23], NC_000015.10:g.81372351CA[24], NC_000015.10:g.81372351CA[25], NC_000015.10:g.81372351CA[26], NC_000015.10:g.81372351CA[27], NC_000015.10:g.81372351CA[28], NC_000015.10:g.81372351CA[30], NC_000015.10:g.81372351CA[31], NC_000015.10:g.81372351CA[32], NC_000015.10:g.81372351CA[33], NC_000015.10:g.81372351CA[34], NC_000015.10:g.81372351CA[35], NC_000015.10:g.81372351CA[36], NC_000015.10:g.81372351CA[37], NC_000015.9:g.81664692CA[6], NC_000015.9:g.81664692CA[9], NC_000015.9:g.81664692CA[11], NC_000015.9:g.81664692CA[12], NC_000015.9:g.81664692CA[13], NC_000015.9:g.81664692CA[14], NC_000015.9:g.81664692CA[15], NC_000015.9:g.81664692CA[16], NC_000015.9:g.81664692CA[17], NC_000015.9:g.81664692CA[18], NC_000015.9:g.81664692CA[19], NC_000015.9:g.81664692CA[20], NC_000015.9:g.81664692CA[21], NC_000015.9:g.81664692CA[22], NC_000015.9:g.81664692CA[23], NC_000015.9:g.81664692CA[24], NC_000015.9:g.81664692CA[25], NC_000015.9:g.81664692CA[26], NC_000015.9:g.81664692CA[27], NC_000015.9:g.81664692CA[28], NC_000015.9:g.81664692CA[30], NC_000015.9:g.81664692CA[31], NC_000015.9:g.81664692CA[32], NC_000015.9:g.81664692CA[33], NC_000015.9:g.81664692CA[34], NC_000015.9:g.81664692CA[35], NC_000015.9:g.81664692CA[36], NC_000015.9:g.81664692CA[37], NG_054935.1:g.6671GT[6], NG_054935.1:g.6671GT[9], NG_054935.1:g.6671GT[11], NG_054935.1:g.6671GT[12], NG_054935.1:g.6671GT[13], NG_054935.1:g.6671GT[14], NG_054935.1:g.6671GT[15], NG_054935.1:g.6671GT[16], NG_054935.1:g.6671GT[17], NG_054935.1:g.6671GT[18], NG_054935.1:g.6671GT[19], NG_054935.1:g.6671GT[20], NG_054935.1:g.6671GT[21], NG_054935.1:g.6671GT[22], NG_054935.1:g.6671GT[23], NG_054935.1:g.6671GT[24], NG_054935.1:g.6671GT[25], NG_054935.1:g.6671GT[26], NG_054935.1:g.6671GT[27], NG_054935.1:g.6671GT[28], NG_054935.1:g.6671GT[30], NG_054935.1:g.6671GT[31], NG_054935.1:g.6671GT[32], NG_054935.1:g.6671GT[33], NG_054935.1:g.6671GT[34], NG_054935.1:g.6671GT[35], NG_054935.1:g.6671GT[36], NG_054935.1:g.6671GT[37]
5.
rs1491239314 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 15:81365670
(GRCh38)
15:81658011
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81365669:CA:
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0.0011/13
(
ALFA)
-=0.00002/1
(GnomAD)
- HGVS:
6.
rs1491169331 has merged into rs398043535 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 15:81365683
(GRCh38)
15:81658024
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:81365670:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.0768/296
(ALSPAC)
-=0.0782/290
(TWINSUK)
- HGVS:
NC_000015.10:g.81365683_81365685del, NC_000015.10:g.81365684_81365685del, NC_000015.10:g.81365685del, NC_000015.10:g.81365685dup, NC_000015.10:g.81365684_81365685dup, NC_000015.10:g.81365683_81365685dup, NC_000015.10:g.81365682_81365685dup, NC_000015.10:g.81365680_81365685dup, NC_000015.10:g.81365679_81365685dup, NC_000015.10:g.81365678_81365685dup, NC_000015.10:g.81365677_81365685dup, NC_000015.10:g.81365676_81365685dup, NC_000015.10:g.81365671_81365685dup, NC_000015.9:g.81658024_81658026del, NC_000015.9:g.81658025_81658026del, NC_000015.9:g.81658026del, NC_000015.9:g.81658026dup, NC_000015.9:g.81658025_81658026dup, NC_000015.9:g.81658024_81658026dup, NC_000015.9:g.81658023_81658026dup, NC_000015.9:g.81658021_81658026dup, NC_000015.9:g.81658020_81658026dup, NC_000015.9:g.81658019_81658026dup, NC_000015.9:g.81658018_81658026dup, NC_000015.9:g.81658017_81658026dup, NC_000015.9:g.81658012_81658026dup, NG_054935.1:g.13405_13407del, NG_054935.1:g.13406_13407del, NG_054935.1:g.13407del, NG_054935.1:g.13407dup, NG_054935.1:g.13406_13407dup, NG_054935.1:g.13405_13407dup, NG_054935.1:g.13404_13407dup, NG_054935.1:g.13402_13407dup, NG_054935.1:g.13401_13407dup, NG_054935.1:g.13400_13407dup, NG_054935.1:g.13399_13407dup, NG_054935.1:g.13398_13407dup, NG_054935.1:g.13393_13407dup
7.
rs1491149641 has merged into rs35807579 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TTT,TTTT,TTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 15:81351358
(GRCh38)
15:81643699
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:81351348:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0./0
(
ALFA)
T=0.375/15
(GENOME_DK)
- HGVS:
NC_000015.10:g.81351358_81351370del, NC_000015.10:g.81351359_81351370del, NC_000015.10:g.81351361_81351370del, NC_000015.10:g.81351362_81351370del, NC_000015.10:g.81351365_81351370del, NC_000015.10:g.81351367_81351370del, NC_000015.10:g.81351368_81351370del, NC_000015.10:g.81351369_81351370del, NC_000015.10:g.81351370del, NC_000015.10:g.81351370dup, NC_000015.10:g.81351369_81351370dup, NC_000015.10:g.81351368_81351370dup, NC_000015.10:g.81351367_81351370dup, NC_000015.10:g.81351366_81351370dup, NC_000015.10:g.81351365_81351370dup, NC_000015.10:g.81351370_81351371insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.81643699_81643711del, NC_000015.9:g.81643700_81643711del, NC_000015.9:g.81643702_81643711del, NC_000015.9:g.81643703_81643711del, NC_000015.9:g.81643706_81643711del, NC_000015.9:g.81643708_81643711del, NC_000015.9:g.81643709_81643711del, NC_000015.9:g.81643710_81643711del, NC_000015.9:g.81643711del, NC_000015.9:g.81643711dup, NC_000015.9:g.81643710_81643711dup, NC_000015.9:g.81643709_81643711dup, NC_000015.9:g.81643708_81643711dup, NC_000015.9:g.81643707_81643711dup, NC_000015.9:g.81643706_81643711dup, NC_000015.9:g.81643711_81643712insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_054935.1:g.27717_27729del, NG_054935.1:g.27718_27729del, NG_054935.1:g.27720_27729del, NG_054935.1:g.27721_27729del, NG_054935.1:g.27724_27729del, NG_054935.1:g.27726_27729del, NG_054935.1:g.27727_27729del, NG_054935.1:g.27728_27729del, NG_054935.1:g.27729del, NG_054935.1:g.27729dup, NG_054935.1:g.27728_27729dup, NG_054935.1:g.27727_27729dup, NG_054935.1:g.27726_27729dup, NG_054935.1:g.27725_27729dup, NG_054935.1:g.27724_27729dup, NG_054935.1:g.27729_27730insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
8.
rs1491075853 has merged into rs59270312 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTT>-,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 15:81360982
(GRCh38)
15:81653323
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:81360972:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTT=0./0
(
ALFA)
T=0.15954/799
(1000Genomes)
T=0.3/12
(GENOME_DK)
T=0.375/3
(KOREAN)
- HGVS:
NC_000015.10:g.81360982_81360988del, NC_000015.10:g.81360985_81360988del, NC_000015.10:g.81360986_81360988del, NC_000015.10:g.81360987_81360988del, NC_000015.10:g.81360988del, NC_000015.10:g.81360988dup, NC_000015.10:g.81360987_81360988dup, NC_000015.10:g.81360986_81360988dup, NC_000015.10:g.81360985_81360988dup, NC_000015.9:g.81653323_81653329del, NC_000015.9:g.81653326_81653329del, NC_000015.9:g.81653327_81653329del, NC_000015.9:g.81653328_81653329del, NC_000015.9:g.81653329del, NC_000015.9:g.81653329dup, NC_000015.9:g.81653328_81653329dup, NC_000015.9:g.81653327_81653329dup, NC_000015.9:g.81653326_81653329dup, NG_054935.1:g.18099_18105del, NG_054935.1:g.18102_18105del, NG_054935.1:g.18103_18105del, NG_054935.1:g.18104_18105del, NG_054935.1:g.18105del, NG_054935.1:g.18105dup, NG_054935.1:g.18104_18105dup, NG_054935.1:g.18103_18105dup, NG_054935.1:g.18102_18105dup
9.
rs1490935187 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- A>-
[Show Flanks]
- Chromosome:
- 15:81341177
(GRCh38)
15:81633518
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81341176:AAAA:AAA
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAA=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
-=0.000035/1
(TOMMO)
- HGVS:
10.
rs1490874553 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:81356402
(GRCh38)
15:81648743
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81356401:C:T
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
11.
rs1490791477 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- A>-
[Show Flanks]
- Chromosome:
- 15:81350354
(GRCh38)
15:81642695
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81350353:AAAA:AAA
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AAA=0.000071/1
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
12.
rs1490698899 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 15:81365473
(GRCh38)
15:81657814
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81365472:C:A,NC_000015.10:81365472:C:T
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000029/4
(GnomAD)
- HGVS:
14.
rs1490530402 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 15:81333910
(GRCh38)
15:81626251
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81333909:A:C
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
15.
rs1490507775 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 15:81347720
(GRCh38)
15:81640061
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81347719:T:G
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
16.
rs1490428317 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 15:81342426
(GRCh38)
15:81634767
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81342425:G:A
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
- HGVS:
17.
rs1490405843 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TTCTCAAG
[Show Flanks]
- Chromosome:
- 15:81358042
(GRCh38)
15:81650384
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81358042:TCAAG:TCAAGTTCTCAAG
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCAAGTTCTCAAG=0./0
(
ALFA)
TCAAGTTC=0.000004/1
(TOPMED)
TCAAGTTC=0.000007/1
(GnomAD)
- HGVS:
18.
rs1490370881 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- T>-
[Show Flanks]
- Chromosome:
- 15:81373619
(GRCh38)
15:81665960
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81373618:TTTT:TTT
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTT=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
- HGVS:
19.
rs1490234319 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACAGTGTAAACCTCTATT>-
[Show Flanks]
- Chromosome:
- 15:81375190
(GRCh38)
15:81667531
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81375187:TTCACAGTGTAAACCTCTATT:TT
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
20.
rs1490219189 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- T>-
[Show Flanks]
- Chromosome:
- 15:81358184
(GRCh38)
15:81650525
(GRCh37)
- Canonical SPDI:
- NC_000015.10:81358183:T:
- Gene:
- TMC3 (Varview), TMC3-AS1 (Varview)
- Functional Consequence:
- intron_variant,coding_sequence_variant,frameshift_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.00004/1
(TOMMO)
- HGVS: