SNP Links for Gene (Select 286411) - SNP

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Select item 14915894551.

rs1491589455 [Homo sapiens]

Variant type:: INS
Alleles:: ->TTCCATAAT [Show Flanks]
Chromosome:: X:140723796 (GRCh38)
X:139805962 (GRCh37)
Canonical SPDI:: NC_000023.11:140723796::TTCCATAAT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTCCATAAT=0.00008/1 (ALFA)
HGVS:: NC_000023.11:g.140723796_140723797insTTCCATAAT, NC_000023.10:g.139805961_139805962insTTCCATAAT

Select item 14915736222.

rs1491573622 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AA [Show Flanks]
Chromosome:: X:140768651 (GRCh38)
X:139850817 (GRCh37)
Canonical SPDI:: NC_000023.11:140768651:A:AAA
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: AA=0.00022/7 (GnomAD)
HGVS:: NC_000023.11:g.140768652_140768653insAA, NC_000023.10:g.139850817_139850818insAA

Select item 14915610203.

rs1491561020 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: X:140723827 (GRCh38)
X:139805992 (GRCh37)
Canonical SPDI:: NC_000023.11:140723826:GC:
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00049/8 (TOMMO)
-=0.00083/4 (1000Genomes)
-=0.00216/4 (GnomAD)
HGVS:: NC_000023.11:g.140723827_140723828del, NC_000023.10:g.139805992_139805993del

Select item 14915463224.

rs1491546322 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GG [Show Flanks]
Chromosome:: X:140762210 (GRCh38)
X:139844376 (GRCh37)
Canonical SPDI:: NC_000023.11:140762210:G:GGG
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: GG=0.00025/4 (GnomAD)
HGVS:: NC_000023.11:g.140762211_140762212insGG, NC_000023.10:g.139844376_139844377insGG

Select item 14915361435.

rs1491536143 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AT [Show Flanks]
Chromosome:: X:140754842 (GRCh38)
X:139837008 (GRCh37)
Canonical SPDI:: NC_000023.11:140754842:T:TAT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
HGVS:: NC_000023.11:g.140754843_140754844insAT, NC_000023.10:g.139837008_139837009insAT

Select item 14915354906.

rs1491535490 has merged into rs1188901479 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTTTCTTTCTTT>-,CTTT,CTTTCTTT,CTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTT [Show Flanks]
Chromosome:: X:140759357 (GRCh38)
X:139841522 (GRCh37)
Canonical SPDI:: NC_000023.11:140759344:CTTTCTTTCTTTCTTTCTTTCTTT:CTTTCTTTCTTT,NC_000023.11:140759344:CTTTCTTTCTTTCTTTCTTTCTTT:CTTTCTTTCTTTCTTT,NC_000023.11:140759344:CTTTCTTTCTTTCTTTCTTTCTTT:CTTTCTTTCTTTCTTTCTTT,NC_000023.11:140759344:CTTTCTTTCTTTCTTTCTTTCTTT:CTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000023.11:140759344:CTTTCTTTCTTTCTTTCTTTCTTT:CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
Gene:: LINC00632 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTTTCTTTCTTTCTTT=0./0 (ALFA)
HGVS:: NC_000023.11:g.140759345CTTT[3], NC_000023.11:g.140759345CTTT[4], NC_000023.11:g.140759345CTTT[5], NC_000023.11:g.140759345CTTT[7], NC_000023.11:g.140759345CTTT[8], NC_000023.10:g.139841510CTTT[3], NC_000023.10:g.139841510CTTT[4], NC_000023.10:g.139841510CTTT[5], NC_000023.10:g.139841510CTTT[7], NC_000023.10:g.139841510CTTT[8]

Select item 14915039747.

rs1491503974 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CC,GC [Show Flanks]
Chromosome:: X:140725203 (GRCh38)
X:139807369 (GRCh37)
Canonical SPDI:: NC_000023.11:140725203:C:CCC,NC_000023.11:140725203:C:CGC
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CGC=0./0 (ALFA)
CC=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.140725204_140725205insCC, NC_000023.11:g.140725204_140725205insGC, NC_000023.10:g.139807369_139807370insCC, NC_000023.10:g.139807369_139807370insGC

Select item 14914990608.

rs1491499060 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GACCAA,TA [Show Flanks]
Chromosome:: X:140723453 (GRCh38)
X:139805619 (GRCh37)
Canonical SPDI:: NC_000023.11:140723453:A:AGACCAA,NC_000023.11:140723453:A:ATA
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: ATA=0./0 (ALFA)
HGVS:: NC_000023.11:g.140723454_140723455insGACCAA, NC_000023.11:g.140723454_140723455insTA, NC_000023.10:g.139805619_139805620insGACCAA, NC_000023.10:g.139805619_139805620insTA

Select item 14914939619.

rs1491493961 has merged into rs752596283 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: X:140753781 (GRCh38)
X:139835946 (GRCh37)
Canonical SPDI:: NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140753768:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.4/16 (GENOME_DK)
HGVS:: NC_000023.11:g.140753781_140753793del, NC_000023.11:g.140753782_140753793del, NC_000023.11:g.140753783_140753793del, NC_000023.11:g.140753784_140753793del, NC_000023.11:g.140753785_140753793del, NC_000023.11:g.140753786_140753793del, NC_000023.11:g.140753787_140753793del, NC_000023.11:g.140753788_140753793del, NC_000023.11:g.140753789_140753793del, NC_000023.11:g.140753790_140753793del, NC_000023.11:g.140753791_140753793del, NC_000023.11:g.140753792_140753793del, NC_000023.11:g.140753793del, NC_000023.11:g.140753793dup, NC_000023.11:g.140753792_140753793dup, NC_000023.11:g.140753791_140753793dup, NC_000023.11:g.140753790_140753793dup, NC_000023.11:g.140753789_140753793dup, NC_000023.11:g.140753788_140753793dup, NC_000023.11:g.140753787_140753793dup, NC_000023.11:g.140753786_140753793dup, NC_000023.11:g.140753785_140753793dup, NC_000023.11:g.140753783_140753793dup, NC_000023.11:g.140753781_140753793dup, NC_000023.11:g.140753780_140753793dup, NC_000023.11:g.140753779_140753793dup, NC_000023.11:g.140753778_140753793dup, NC_000023.11:g.140753776_140753793dup, NC_000023.11:g.140753775_140753793dup, NC_000023.11:g.140753774_140753793dup, NC_000023.11:g.140753773_140753793dup, NC_000023.11:g.140753771_140753793dup, NC_000023.11:g.140753770_140753793dup, NC_000023.11:g.140753769_140753793dup, NC_000023.11:g.140753793_140753794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.11:g.140753793_140753794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.11:g.140753793_140753794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.11:g.140753793_140753794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.11:g.140753793_140753794insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139835946_139835958del, NC_000023.10:g.139835947_139835958del, NC_000023.10:g.139835948_139835958del, NC_000023.10:g.139835949_139835958del, NC_000023.10:g.139835950_139835958del, NC_000023.10:g.139835951_139835958del, NC_000023.10:g.139835952_139835958del, NC_000023.10:g.139835953_139835958del, NC_000023.10:g.139835954_139835958del, NC_000023.10:g.139835955_139835958del, NC_000023.10:g.139835956_139835958del, NC_000023.10:g.139835957_139835958del, NC_000023.10:g.139835958del, NC_000023.10:g.139835958dup, NC_000023.10:g.139835957_139835958dup, NC_000023.10:g.139835956_139835958dup, NC_000023.10:g.139835955_139835958dup, NC_000023.10:g.139835954_139835958dup, NC_000023.10:g.139835953_139835958dup, NC_000023.10:g.139835952_139835958dup, NC_000023.10:g.139835951_139835958dup, NC_000023.10:g.139835950_139835958dup, NC_000023.10:g.139835948_139835958dup, NC_000023.10:g.139835946_139835958dup, NC_000023.10:g.139835945_139835958dup, NC_000023.10:g.139835944_139835958dup, NC_000023.10:g.139835943_139835958dup, NC_000023.10:g.139835941_139835958dup, NC_000023.10:g.139835940_139835958dup, NC_000023.10:g.139835939_139835958dup, NC_000023.10:g.139835938_139835958dup, NC_000023.10:g.139835936_139835958dup, NC_000023.10:g.139835935_139835958dup, NC_000023.10:g.139835934_139835958dup, NC_000023.10:g.139835958_139835959insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139835958_139835959insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139835958_139835959insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139835958_139835959insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139835958_139835959insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149143052110.

rs1491430521 has merged into rs1320194053 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT [Show Flanks]
Chromosome:: X:140748901 (GRCh38)
X:139831066 (GRCh37)
Canonical SPDI:: NC_000023.11:140748894:ATATATATAT:ATATAT,NC_000023.11:140748894:ATATATATAT:ATATATAT,NC_000023.11:140748894:ATATATATAT:ATATATATATAT
Gene:: LINC00632 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATAT=0./0 (ALFA)
-=0.00023/3 (TOMMO)
HGVS:: NC_000023.11:g.140748895AT[3], NC_000023.11:g.140748895AT[4], NC_000023.11:g.140748895AT[6], NC_000023.10:g.139831060AT[3], NC_000023.10:g.139831060AT[4], NC_000023.10:g.139831060AT[6]

Select item 149142646211.

rs1491426462 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: X:140748895 (GRCh38)
X:139831061 (GRCh37)
Canonical SPDI:: NC_000023.11:140748895:T:TT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00008/8 (GnomAD)
HGVS:: NC_000023.11:g.140748896dup, NC_000023.10:g.139831061dup

Select item 149141896212.

rs1491418962 has merged into rs754791939 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA [Show Flanks]
Chromosome:: X:140714836 (GRCh38)
X:139797001 (GRCh37)
Canonical SPDI:: NC_000023.11:140714831:AAAAAAA:AAAA,NC_000023.11:140714831:AAAAAAA:AAAAA,NC_000023.11:140714831:AAAAAAA:AAAAAA
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAA=0.00017/2 (ALFA)
HGVS:: NC_000023.11:g.140714836_140714838del, NC_000023.11:g.140714837_140714838del, NC_000023.11:g.140714838del, NC_000023.10:g.139797001_139797003del, NC_000023.10:g.139797002_139797003del, NC_000023.10:g.139797003del

Select item 149140152513.

rs1491401525 has merged into rs1329087464 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACA>-,CA,CACACA [Show Flanks]
Chromosome:: X:140723836 (GRCh38)
X:139806001 (GRCh37)
Canonical SPDI:: NC_000023.11:140723827:CACACACACACA:CACACACA,NC_000023.11:140723827:CACACACACACA:CACACACACA,NC_000023.11:140723827:CACACACACACA:CACACACACACACA
Gene:: LINC00632 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CACACACACA=0./0 (ALFA)
-=0.00016/2 (TOMMO)
HGVS:: NC_000023.11:g.140723828CA[4], NC_000023.11:g.140723828CA[5], NC_000023.11:g.140723828CA[7], NC_000023.10:g.139805993CA[4], NC_000023.10:g.139805993CA[5], NC_000023.10:g.139805993CA[7]

Select item 149139231414.

rs1491392314 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTT [Show Flanks]
Chromosome:: X:140729878 (GRCh38)
X:139812044 (GRCh37)
Canonical SPDI:: NC_000023.11:140729878:TT:TTCTT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
HGVS:: NC_000023.11:g.140729880_140729881insCTT, NC_000023.10:g.139812045_139812046insCTT

Select item 149139085815.

rs1491390858 has merged into rs1299810341 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACA>-,CA,CACACA [Show Flanks]
Chromosome:: X:140724392 (GRCh38)
X:139806557 (GRCh37)
Canonical SPDI:: NC_000023.11:140724385:CACACACACA:CACACA,NC_000023.11:140724385:CACACACACA:CACACACA,NC_000023.11:140724385:CACACACACA:CACACACACACA
Gene:: LINC00632 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CACACACA=0./0 (ALFA)
HGVS:: NC_000023.11:g.140724386CA[3], NC_000023.11:g.140724386CA[4], NC_000023.11:g.140724386CA[6], NC_000023.10:g.139806551CA[3], NC_000023.10:g.139806551CA[4], NC_000023.10:g.139806551CA[6]

Select item 149138721416.

rs1491387214 has merged into rs35668777 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: X:140758382 (GRCh38)
X:139840547 (GRCh37)
Canonical SPDI:: NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140758372:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00632 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
TT=0.3256/1229 (1000Genomes)
HGVS:: NC_000023.11:g.140758382_140758392del, NC_000023.11:g.140758383_140758392del, NC_000023.11:g.140758384_140758392del, NC_000023.11:g.140758385_140758392del, NC_000023.11:g.140758386_140758392del, NC_000023.11:g.140758387_140758392del, NC_000023.11:g.140758389_140758392del, NC_000023.11:g.140758390_140758392del, NC_000023.11:g.140758391_140758392del, NC_000023.11:g.140758392del, NC_000023.11:g.140758392dup, NC_000023.11:g.140758391_140758392dup, NC_000023.11:g.140758388_140758392dup, NC_000023.11:g.140758392_140758393insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.11:g.140758392_140758393insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139840547_139840557del, NC_000023.10:g.139840548_139840557del, NC_000023.10:g.139840549_139840557del, NC_000023.10:g.139840550_139840557del, NC_000023.10:g.139840551_139840557del, NC_000023.10:g.139840552_139840557del, NC_000023.10:g.139840554_139840557del, NC_000023.10:g.139840555_139840557del, NC_000023.10:g.139840556_139840557del, NC_000023.10:g.139840557del, NC_000023.10:g.139840557dup, NC_000023.10:g.139840556_139840557dup, NC_000023.10:g.139840553_139840557dup, NC_000023.10:g.139840557_139840558insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000023.10:g.139840557_139840558insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149138173317.

rs1491381733 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: X:140768657 (GRCh38)
X:139850822 (GRCh37)
Canonical SPDI:: NC_000023.11:140768650:TATATATA:TATATA
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TATATA=0./0 (ALFA)
-=0.00006/2 (GnomAD)
HGVS:: NC_000023.11:g.140768651TA[3], NC_000023.10:g.139850816TA[3]

Select item 149135989918.

rs1491359899 [Homo sapiens]

Variant type:: DEL
Alleles:: CC>- [Show Flanks]
Chromosome:: X:140759344 (GRCh38)
X:139841509 (GRCh37)
Canonical SPDI:: NC_000023.11:140759343:CC:
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000019/5 (TOPMED)
-=0.000022/1 (GnomAD)
HGVS:: NC_000023.11:g.140759344_140759345del, NC_000023.10:g.139841509_139841510del

Select item 149134929519.

rs1491349295 has merged into rs544905273 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: X:140714831 (GRCh38)
X:139796996 (GRCh37)
Canonical SPDI:: NC_000023.11:140714829:ATA:A
Gene:: LINC00632 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.10782/1279 (ALFA)
-=0.05/2 (GENOME_DK)
-=0.13409/1526 (TOMMO)
-=0.14399/416 (ALSPAC)
-=0.14833/550 (TWINSUK)
-=0.23509/12191 (GnomAD)
HGVS:: NC_000023.11:g.140714831_140714832del, NC_000023.10:g.139796996_139796997del

Select item 149134846420.

rs1491348464 has merged into rs1207034823 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTT>-,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: X:140729881 (GRCh38)
X:139812046 (GRCh37)
Canonical SPDI:: NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:140729877:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00632 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
HGVS:: NC_000023.11:g.140729881_140729895del, NC_000023.11:g.140729885_140729895del, NC_000023.11:g.140729887_140729895del, NC_000023.11:g.140729888_140729895del, NC_000023.11:g.140729889_140729895del, NC_000023.11:g.140729892_140729895del, NC_000023.11:g.140729894_140729895del, NC_000023.11:g.140729895del, NC_000023.11:g.140729895dup, NC_000023.11:g.140729894_140729895dup, NC_000023.11:g.140729893_140729895dup, NC_000023.11:g.140729891_140729895dup, NC_000023.11:g.140729890_140729895dup, NC_000023.11:g.140729889_140729895dup, NC_000023.11:g.140729888_140729895dup, NC_000023.11:g.140729887_140729895dup, NC_000023.11:g.140729886_140729895dup, NC_000023.11:g.140729884_140729895dup, NC_000023.11:g.140729883_140729895dup, NC_000023.10:g.139812046_139812060del, NC_000023.10:g.139812050_139812060del, NC_000023.10:g.139812052_139812060del, NC_000023.10:g.139812053_139812060del, NC_000023.10:g.139812054_139812060del, NC_000023.10:g.139812057_139812060del, NC_000023.10:g.139812059_139812060del, NC_000023.10:g.139812060del, NC_000023.10:g.139812060dup, NC_000023.10:g.139812059_139812060dup, NC_000023.10:g.139812058_139812060dup, NC_000023.10:g.139812056_139812060dup, NC_000023.10:g.139812055_139812060dup, NC_000023.10:g.139812054_139812060dup, NC_000023.10:g.139812053_139812060dup, NC_000023.10:g.139812052_139812060dup, NC_000023.10:g.139812051_139812060dup, NC_000023.10:g.139812049_139812060dup, NC_000023.10:g.139812048_139812060dup

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