SNP Links for Gene (Select 284933) - SNP

Links from Gene

Items: 1 to 20 of 3050

<< First< Prev

Page of 153

Next >Last >>

Select item 14915841861.

rs1491584186 [Homo sapiens]

Variant type:: SNV:
Alleles:: GT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14915574762.

rs1491557476 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGGGGTGTGTGTGTG,TGGTGTGTGTGTG,TGTGGTGTGTGTGTG,TGTGTGGTGTGTGTGTG [Show Flanks]
Chromosome:: 22:48542138 (GRCh38)
22:48937951 (GRCh37)
Canonical SPDI:: NC_000022.11:48542138:GTGTGTGTGTG:GTGTGTGTGTGTGGGGTGTGTGTGTG,NC_000022.11:48542138:GTGTGTGTGTG:GTGTGTGTGTGTGGTGTGTGTGTG,NC_000022.11:48542138:GTGTGTGTGTG:GTGTGTGTGTGTGTGGTGTGTGTGTG,NC_000022.11:48542138:GTGTGTGTGTG:GTGTGTGTGTGTGTGTGGTGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGTGTGTGTGGTGTGTGTGTG=0./0 (ALFA)
GTGTGTGTGTGTGTG=0.00005/1 (TOMMO)
HGVS:: NC_000022.11:g.48542139_48542149GT[6]G[4]TG[5], NC_000022.11:g.48542139_48542149GT[6]GGTGTGTGTGTG[1], NC_000022.11:g.48542139_48542149GT[7]GGTGTGTGTGTG[1], NC_000022.11:g.48542139_48542149GT[8]GGTGTGTGTGTG[1], NC_000022.10:g.48937951_48937961GT[6]G[4]TG[5], NC_000022.10:g.48937951_48937961GT[6]GGTGTGTGTGTG[1], NC_000022.10:g.48937951_48937961GT[7]GGTGTGTGTGTG[1], NC_000022.10:g.48937951_48937961GT[8]GGTGTGTGTGTG[1]

Select item 14915185233.

rs1491518523 has merged into rs1343061011 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTGTG>-,TG,TGTG,TGTGTGTG,TGTGTGTGGTGTGTGTGTGTG [Show Flanks]
Chromosome:: 22:48542144 (GRCh38)
22:48937956 (GRCh37)
Canonical SPDI:: NC_000022.11:48542137:TGTGTGTGTGTG:TGTGTG,NC_000022.11:48542137:TGTGTGTGTGTG:TGTGTGTG,NC_000022.11:48542137:TGTGTGTGTGTG:TGTGTGTGTG,NC_000022.11:48542137:TGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000022.11:48542137:TGTGTGTGTGTG:TGTGTGTGTGTGTGGTGTGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.48542138TG[3], NC_000022.11:g.48542138TG[4], NC_000022.11:g.48542138TG[5], NC_000022.11:g.48542138TG[7], NC_000022.11:g.48542138_48542149TG[7]GT[6]G[1], NC_000022.10:g.48937950TG[3], NC_000022.10:g.48937950TG[4], NC_000022.10:g.48937950TG[5], NC_000022.10:g.48937950TG[7], NC_000022.10:g.48937950_48937961TG[7]GT[6]G[1]

Select item 14915153064.

rs1491515306 has merged into rs199651526 [Homo sapiens]

Variant type:: DELINS
Alleles:: GG>-,G,GGG [Show Flanks]
Chromosome:: 22:48542279 (GRCh38)
22:48938091 (GRCh37)
Canonical SPDI:: NC_000022.11:48542274:GGGGGG:GGGG,NC_000022.11:48542274:GGGGGG:GGGGG,NC_000022.11:48542274:GGGGGG:GGGGGGG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGGGG=0./0 (ALFA)
-=0.005/3 (NorthernSweden)
-=0.09813/489 (1000Genomes)
-=0.23352/425 (Korea1K)
HGVS:: NC_000022.11:g.48542279_48542280del, NC_000022.11:g.48542280del, NC_000022.11:g.48542280dup, NC_000022.10:g.48938091_48938092del, NC_000022.10:g.48938092del, NC_000022.10:g.48938092dup

Select item 14912706615.

rs1491270661 has merged into rs1555886629 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTG>-,TG,TGTGTG,TGTGTGGTGTGTGTGTGTG,TGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTG,TGTGTGTG [Show Flanks]
Chromosome:: 22:48542647 (GRCh38)
22:48938459 (GRCh37)
Canonical SPDI:: NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTG,NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTGTG,NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTGTGTGTGGTGTGTGTGTGTG,NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTG,NC_000022.11:48542638:TGTGTGTGTGTG:TGTGTGTGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTG=0./0 (ALFA)
-=0.00042/6 (TOMMO)
HGVS:: NC_000022.11:g.48542639TG[4], NC_000022.11:g.48542639TG[5], NC_000022.11:g.48542639TG[7], NC_000022.11:g.48542639_48542650TG[7]GT[6]G[1], NC_000022.11:g.48542639_48542650TG[7]GTGTGTGTGTGTG[2], NC_000022.11:g.48542639TG[8], NC_000022.10:g.48938451TG[4], NC_000022.10:g.48938451TG[5], NC_000022.10:g.48938451TG[7], NC_000022.10:g.48938451_48938462TG[7]GT[6]G[1], NC_000022.10:g.48938451_48938462TG[7]GTGTGTGTGTGTG[2], NC_000022.10:g.48938451TG[8]

Select item 14912490106.

rs1491249010 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 22:48542096 (GRCh38)
22:48937908 (GRCh37)
Canonical SPDI:: NC_000022.11:48542095:AT:
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000017/2 (GnomAD)
HGVS:: NC_000022.11:g.48542096_48542097del, NC_000022.10:g.48937908_48937909del

Select item 14912025127.

rs1491202512 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GGGTGTGTGTG,GTGTGTGTG [Show Flanks]
Chromosome:: 22:48542639 (GRCh38)
22:48938452 (GRCh37)
Canonical SPDI:: NC_000022.11:48542639:GTGTGTGTG:GTGTGTGTGGGGTGTGTGTG,NC_000022.11:48542639:GTGTGTGTG:GTGTGTGTGGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGGTGTGTGTG=0./0 (ALFA)
GTGTGTGTG=0.000004/1 (TOPMED)
GTGTGTGTG=0.00004/1 (GnomAD)
HGVS:: NC_000022.11:g.48542640_48542648GT[4]G[4]TG[4], NC_000022.11:g.48542640_48542648dup, NC_000022.10:g.48938452_48938460GT[4]G[4]TG[4], NC_000022.10:g.48938452_48938460dup

Select item 14911997958.

rs1491199795 has merged into rs147056871 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGGTGTGTGTGTGTGTGGTGTGTGTG>-,TGGTGTGTGTG,TGGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTG [Show Flanks]
Chromosome:: 22:48542105 (GRCh38)
22:48937917 (GRCh37)
Canonical SPDI:: NC_000022.11:48542096:TGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTG:TGTGTGTG,NC_000022.11:48542096:TGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTG:TGTGTGTGTGGTGTGTGTG,NC_000022.11:48542096:TGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTG:TGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTG=0.00014/1 (ALFA)
TGTGTGTGTGGTGTG=0.1/4 (GENOME_DK)
TGTGTGGTGTGTGTG=0.31553/1170 (TWINSUK)
-=0.32821/5470 (TOMMO)
TGTGTGTGTGGTGTG=0.33667/202 (NorthernSweden)
HGVS:: NC_000022.11:g.48542105_48542130del, NC_000022.11:g.48542101TGTGTGGTGTGTGTG[1], NC_000022.11:g.48542101TGTGTGGTGTGTGTG[3], NC_000022.10:g.48937917_48937942del, NC_000022.10:g.48937913TGTGTGGTGTGTGTG[1], NC_000022.10:g.48937913TGTGTGGTGTGTGTG[3]

Select item 14910301499.

rs1491030149 has merged into rs151287754 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTG>-,TG,TGTGTG,TGTGTGTG [Show Flanks]
Chromosome:: 22:48542570 (GRCh38)
22:48938382 (GRCh37)
Canonical SPDI:: NC_000022.11:48542564:GTGTGTGTG:GTGTG,NC_000022.11:48542564:GTGTGTGTG:GTGTGTG,NC_000022.11:48542564:GTGTGTGTG:GTGTGTGTGTG,NC_000022.11:48542564:GTGTGTGTG:GTGTGTGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTG=0./0 (ALFA)
-=0.19708/987 (1000Genomes)
-=0.25775/449 (Korea1K)
-=0.27255/272 (GoNL)
-=0.3293/4335 (TOMMO)
-=0.4/16 (GENOME_DK)
HGVS:: NC_000022.11:g.48542566TG[2], NC_000022.11:g.48542566TG[3], NC_000022.11:g.48542566TG[5], NC_000022.11:g.48542566TG[6], NC_000022.10:g.48938378TG[2], NC_000022.10:g.48938378TG[3], NC_000022.10:g.48938378TG[5], NC_000022.10:g.48938378TG[6]

Select item 149100683910.

rs1491006839 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 22:48542287 (GRCh38)
22:48938099 (GRCh37)
Canonical SPDI:: NC_000022.11:48542279:GTGTGTGTG:GTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTG=0.000169/2 (ALFA)
-=0.00009/11 (GnomAD)
-=0.000098/2 (TOMMO)
HGVS:: NC_000022.11:g.48542281TG[3], NC_000022.10:g.48938093TG[3]

Select item 149096309911.

rs1490963099 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 22:48542663 (GRCh38)
22:48938476 (GRCh37)
Canonical SPDI:: NC_000022.11:48542663:G:GG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000022.11:g.48542664dup, NC_000022.10:g.48938476dup

Select item 149072933612.

rs1490729336 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:48549160 (GRCh38)
22:48944972 (GRCh37)
Canonical SPDI:: NC_000022.11:48549159:C:T
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000043/6 (GnomAD)
T=0.000049/13 (TOPMED)
HGVS:: NC_000022.11:g.48549160C>T, NC_000022.10:g.48944972C>T

Select item 149072816013.

rs1490728160 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:48548884 (GRCh38)
22:48944696 (GRCh37)
Canonical SPDI:: NC_000022.11:48548883:C:T
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.48548884C>T, NC_000022.10:g.48944696C>T

Select item 149062098914.

rs1490620989 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 22:48548228 (GRCh38)
22:48944040 (GRCh37)
Canonical SPDI:: NC_000022.11:48548225:CTCT:CT
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.48548226CT[1], NC_000022.10:g.48944038CT[1]

Select item 149047179915.

rs1490471799 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 22:48542528 (GRCh38)
22:48938340 (GRCh37)
Canonical SPDI:: NC_000022.11:48542523:TGTGTG:TGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TGTG=0./0 (ALFA)
HGVS:: NC_000022.11:g.48542524TG[2], NC_000022.10:g.48938336TG[2]

Select item 149037740716.

rs1490377407 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:48544831 (GRCh38)
22:48940643 (GRCh37)
Canonical SPDI:: NC_000022.11:48544830:A:G
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.48544831A>G, NC_000022.10:g.48940643A>G, NR_038917.1:n.700T>C

Select item 149036011917.

rs1490360119 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGGTGTGTGTG>- [Show Flanks]
Chromosome:: 22:48542265 (GRCh38)
22:48938077 (GRCh37)
Canonical SPDI:: NC_000022.11:48542256:TGTGTGTGTGGTGTGTGTG:TGTGTGTG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TGTGTGTG=0./0 (ALFA)
HGVS:: NC_000022.11:g.48542265_48542275del, NC_000022.10:g.48938077_48938087del

Select item 149023541918.

rs1490235419 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:48547972 (GRCh38)
22:48943784 (GRCh37)
Canonical SPDI:: NC_000022.11:48547971:T:C
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.48547972T>C, NC_000022.10:g.48943784T>C

Select item 148998122419.

rs1489981224 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:48542388 (GRCh38)
22:48938200 (GRCh37)
Canonical SPDI:: NC_000022.11:48542387:G:A
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000022.11:g.48542388G>A, NC_000022.10:g.48938200G>A

Select item 148949575420.

rs1489495754 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGGGGAAG>- [Show Flanks]
Chromosome:: 22:48547421 (GRCh38)
22:48943233 (GRCh37)
Canonical SPDI:: NC_000022.11:48547418:AGAAGGGGAAG:AG
Gene:: TAFA5 (Varview), LOC284933 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.48547421_48547429del, NC_000022.10:g.48943233_48943241del

<< First< Prev

Page of 153

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 3050

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity