SNP Links for Gene (Select 283189) - SNP

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Select item 14904622181.

rs1490462218 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:56744758 (GRCh38)
11:56512234 (GRCh37)
Canonical SPDI:: NC_000011.10:56744757:G:A,NC_000011.10:56744757:G:C
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.56744758G>A, NC_000011.10:g.56744758G>C, NC_000011.9:g.56512234G>A, NC_000011.9:g.56512234G>C, NW_003871074.1:g.62600G>A, NW_003871074.1:g.62600G>C

Select item 14901262952.

rs1490126295 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56745555 (GRCh38)
11:56513031 (GRCh37)
Canonical SPDI:: NC_000011.10:56745554:G:A
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56745555G>A, NC_000011.9:g.56513031G>A, NW_003871074.1:g.63397G>A

Select item 14900794093.

rs1490079409 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:56744625 (GRCh38)
11:56512101 (GRCh37)
Canonical SPDI:: NC_000011.10:56744624:T:A
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56744625T>A, NC_000011.9:g.56512101T>A, NW_003871074.1:g.62467T>A

Select item 14899715874.

rs1489971587 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:56745129 (GRCh38)
11:56512605 (GRCh37)
Canonical SPDI:: NC_000011.10:56745128:G:C
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56745129G>C, NC_000011.9:g.56512605G>C, NW_003871074.1:g.62971G>C

Select item 14887881725.

rs1488788172 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:56745096 (GRCh38)
11:56512572 (GRCh37)
Canonical SPDI:: NC_000011.10:56745095:A:T
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000011.10:g.56745096A>T, NC_000011.9:g.56512572A>T, NW_003871074.1:g.62938A>T

Select item 14881841886.

rs1488184188 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:56744305 (GRCh38)
11:56511781 (GRCh37)
Canonical SPDI:: NC_000011.10:56744304:C:T
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56744305C>T, NC_000011.9:g.56511781C>T, NW_003871074.1:g.62147C>T

Select item 14868306307.

rs1486830630 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56744848 (GRCh38)
11:56512324 (GRCh37)
Canonical SPDI:: NC_000011.10:56744847:A:G
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56744848A>G, NC_000011.9:g.56512324A>G, NW_003871074.1:g.62690A>G

Select item 14867387588.

rs1486738758 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 11:56743904 (GRCh38)
11:56511380 (GRCh37)
Canonical SPDI:: NC_000011.10:56743903:C:A,NC_000011.10:56743903:C:G
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
G=0.000212/4 (TOMMO)
HGVS:: NC_000011.10:g.56743904C>A, NC_000011.10:g.56743904C>G, NC_000011.9:g.56511380C>A, NC_000011.9:g.56511380C>G, NW_003871074.1:g.61746C>A, NW_003871074.1:g.61746C>G, NR_106743.1:n.32C>A, NR_106743.1:n.32C>G

Select item 14858226749.

rs1485822674 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:56745147 (GRCh38)
11:56512623 (GRCh37)
Canonical SPDI:: NC_000011.10:56745146:C:G
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56745147C>G, NC_000011.9:g.56512623C>G, NW_003871074.1:g.62989C>G

Select item 148463102310.

rs1484631023 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56742353 (GRCh38)
11:56509829 (GRCh37)
Canonical SPDI:: NC_000011.10:56742352:T:C
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56742353T>C, NC_000011.9:g.56509829T>C, NW_003871074.1:g.60195T>C, NM_001005284.2:c.*475A>G, NM_001390832.1:c.*475A>G

Select item 148139755111.

rs1481397551 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56743714 (GRCh38)
11:56511190 (GRCh37)
Canonical SPDI:: NC_000011.10:56743713:G:A
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: upstream_transcript_variant,missense_variant,coding_sequence_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56743714G>A, NC_000011.9:g.56511190G>A, NW_003871074.1:g.61556G>A, NM_001005284.2:c.53C>T, NM_001005284.1:c.98C>T, NM_001390832.1:c.53C>T, NP_001005284.2:p.Ser18Leu, NP_001377761.1:p.Ser18Leu

Select item 148052916212.

rs1480529162 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56744838 (GRCh38)
11:56512314 (GRCh37)
Canonical SPDI:: NC_000011.10:56744837:G:A
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.56744838G>A, NC_000011.9:g.56512314G>A, NW_003871074.1:g.62680G>A

Select item 147960093813.

rs1479600938 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:56744298 (GRCh38)
11:56511774 (GRCh37)
Canonical SPDI:: NC_000011.10:56744297:C:T
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56744298C>T, NC_000011.9:g.56511774C>T, NW_003871074.1:g.62140C>T

Select item 147956980414.

rs1479569804 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:56745220 (GRCh38)
11:56512696 (GRCh37)
Canonical SPDI:: NC_000011.10:56745219:G:A,NC_000011.10:56745219:G:T
Gene:: OR9G4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.56745220G>A, NC_000011.10:g.56745220G>T, NC_000011.9:g.56512696G>A, NC_000011.9:g.56512696G>T, NW_003871074.1:g.63062G>A, NW_003871074.1:g.63062G>T

Select item 147900177215.

rs1479001772 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56742383 (GRCh38)
11:56509859 (GRCh37)
Canonical SPDI:: NC_000011.10:56742382:T:C
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
C=0.000106/2 (TOMMO)
C=0.000342/1 (KOREAN)
HGVS:: NC_000011.10:g.56742383T>C, NC_000011.9:g.56509859T>C, NW_003871074.1:g.60225T>C, NM_001005284.2:c.*445A>G, NM_001390832.1:c.*445A>G

Select item 147863706216.

rs1478637062 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:56743059 (GRCh38)
11:56510535 (GRCh37)
Canonical SPDI:: NC_000011.10:56743058:C:G
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: upstream_transcript_variant,missense_variant,coding_sequence_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.56743059C>G, NC_000011.9:g.56510535C>G, NW_003871074.1:g.60901C>G, NM_001005284.2:c.708G>C, NM_001005284.1:c.753G>C, NM_001390832.1:c.708G>C, NP_001005284.2:p.Lys236Asn, NP_001377761.1:p.Lys236Asn

Select item 147830255317.

rs1478302553 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:56742537 (GRCh38)
11:56510013 (GRCh37)
Canonical SPDI:: NC_000011.10:56742536:C:A
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56742537C>A, NC_000011.9:g.56510013C>A, NW_003871074.1:g.60379C>A, NM_001005284.2:c.*291G>T, NM_001390832.1:c.*291G>T

Select item 147805595218.

rs1478055952 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56742955 (GRCh38)
11:56510431 (GRCh37)
Canonical SPDI:: NC_000011.10:56742954:T:C
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: upstream_transcript_variant,missense_variant,coding_sequence_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56742955T>C, NC_000011.9:g.56510431T>C, NW_003871074.1:g.60797T>C, NM_001005284.2:c.812A>G, NM_001005284.1:c.857A>G, NM_001390832.1:c.812A>G, NP_001005284.2:p.Asp271Gly, NP_001377761.1:p.Asp271Gly

Select item 147517363519.

rs1475173635 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:56744374 (GRCh38)
11:56511850 (GRCh37)
Canonical SPDI:: NC_000011.10:56744373:A:C,NC_000011.10:56744373:A:G
Gene:: OR9G4 (Varview), MIR6128 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.56744374A>C, NC_000011.10:g.56744374A>G, NC_000011.9:g.56511850A>C, NC_000011.9:g.56511850A>G, NW_003871074.1:g.62216A>C, NW_003871074.1:g.62216A>G

Select item 147501457920.

rs1475014579 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTT
Chromosome:: no mapping
Canonical SPDI:

dbSNP

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