SNP Links for Gene (Select 25799) - SNP

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Select item 14914430321.

rs1491443032 has merged into rs1047639171 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: 19:58465443 (GRCh38)
19:58976810 (GRCh37)
Canonical SPDI:: NC_000019.10:58465442:CCCCC:CCCC,NC_000019.10:58465442:CCCCC:CCCCCC
Gene:: ZNF324 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCC=0./0 (ALFA)
HGVS:: NC_000019.10:g.58465447del, NC_000019.10:g.58465447dup, NC_000019.9:g.58976814del, NC_000019.9:g.58976814dup

Select item 14906274482.

rs1490627448 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:58468281 (GRCh38)
19:58979648 (GRCh37)
Canonical SPDI:: NC_000019.10:58468280:G:C
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58468281G>C, NC_000019.9:g.58979648G>C

Select item 14902514083.

rs1490251408 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:58468667 (GRCh38)
19:58980034 (GRCh37)
Canonical SPDI:: NC_000019.10:58468666:C:T
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58468667C>T, NC_000019.9:g.58980034C>T

Select item 14898825084.

rs1489882508 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:58472538 (GRCh38)
19:58983905 (GRCh37)
Canonical SPDI:: NC_000019.10:58472537:A:G
Gene:: ZNF324 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58472538A>G, NC_000019.9:g.58983905A>G, XM_005258713.5:c.*384A>G, XM_005258713.4:c.*384A>G, XM_005258713.3:c.*384A>G, XM_005258713.2:c.*384A>G, XM_005258713.1:c.*384A>G, NM_014347.3:c.*384A>G, NM_014347.2:c.*384A>G

Select item 14896239275.

rs1489623927 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:58470698 (GRCh38)
19:58982065 (GRCh37)
Canonical SPDI:: NC_000019.10:58470697:T:C
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58470698T>C, NC_000019.9:g.58982065T>C

Select item 14895062866.

rs1489506286 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:58473196 (GRCh38)
19:58984563 (GRCh37)
Canonical SPDI:: NC_000019.10:58473195:C:G,NC_000019.10:58473195:C:T
Gene:: ZNF324 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.58473196C>G, NC_000019.10:g.58473196C>T, NC_000019.9:g.58984563C>G, NC_000019.9:g.58984563C>T, XM_005258713.5:c.*1042C>G, XM_005258713.5:c.*1042C>T, XM_005258713.4:c.*1042C>G, XM_005258713.4:c.*1042C>T, XM_005258713.3:c.*1042C>G, XM_005258713.3:c.*1042C>T, XM_005258713.2:c.*1042C>G, XM_005258713.2:c.*1042C>T, XM_005258713.1:c.*1042C>G, XM_005258713.1:c.*1042C>T, NM_014347.3:c.*1042C>G, NM_014347.3:c.*1042C>T, NM_014347.2:c.*1042C>G, NM_014347.2:c.*1042C>T

Select item 14894758137.

rs1489475813 [Homo sapiens]

Variant type:: DEL
Alleles:: ATGACAGTGGATGCTAAG>- [Show Flanks]
Chromosome:: 19:58472475 (GRCh38)
19:58983842 (GRCh37)
Canonical SPDI:: NC_000019.10:58472474:ATGACAGTGGATGCTAAG:
Gene:: ZNF324 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
-=0.000106/2 (TOMMO)
HGVS:: NC_000019.10:g.58472475_58472492del, NC_000019.9:g.58983842_58983859del, XM_005258713.5:c.*321_*338del, XM_005258713.4:c.*321_*338del, XM_005258713.3:c.*321_*338del, XM_005258713.2:c.*321_*338del, XM_005258713.1:c.*321_*338del, NM_014347.3:c.*321_*338del, NM_014347.2:c.*321_*338del

Select item 14889878468.

rs1488987846 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:58467489 (GRCh38)
19:58978856 (GRCh37)
Canonical SPDI:: NC_000019.10:58467488:G:C
Gene:: ZNF324 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000057/8 (GnomAD)
HGVS:: NC_000019.10:g.58467489G>C, NC_000019.9:g.58978856G>C, XM_005258713.5:c.-690G>C, XM_005258713.4:c.-690G>C

Select item 14889346919.

rs1488934691 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:58469962 (GRCh38)
19:58981329 (GRCh37)
Canonical SPDI:: NC_000019.10:58469961:C:G
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.00007/1 (ALFA)
HGVS:: NC_000019.10:g.58469962C>G, NC_000019.9:g.58981329C>G

Select item 148827900110.

rs1488279001 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCCA>- [Show Flanks]
Chromosome:: 19:58472616 (GRCh38)
19:58983983 (GRCh37)
Canonical SPDI:: NC_000019.10:58472613:CATCCA:CA
Gene:: ZNF324 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: CA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.58472616_58472619del, NC_000019.9:g.58983983_58983986del, XM_005258713.5:c.*462_*465del, XM_005258713.4:c.*462_*465del, XM_005258713.3:c.*462_*465del, XM_005258713.2:c.*462_*465del, XM_005258713.1:c.*462_*465del, NM_014347.3:c.*462_*465del, NM_014347.2:c.*462_*465del

Select item 148823235111.

rs1488232351 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:58469810 (GRCh38)
19:58981177 (GRCh37)
Canonical SPDI:: NC_000019.10:58469809:C:T
Gene:: ZNF324 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58469810C>T, NC_000019.9:g.58981177C>T, XM_005258713.5:c.219C>T, XM_005258713.4:c.219C>T, XM_005258713.3:c.219C>T, XM_005258713.2:c.219C>T, XM_005258713.1:c.219C>T, NM_014347.3:c.204C>T, NM_014347.2:c.204C>T

Select item 148799079912.

rs1487990799 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATTTTATGT>- [Show Flanks]
Chromosome:: 19:58469070 (GRCh38)
19:58980437 (GRCh37)
Canonical SPDI:: NC_000019.10:58469065:ATGTATTTTATGT:ATGT
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATGT=0./0 (ALFA)
-=0.000036/5 (GnomAD)
-=0.000042/11 (TOPMED)
HGVS:: NC_000019.10:g.58469070_58469078del, NC_000019.9:g.58980437_58980445del

Select item 148752388813.

rs1487523888 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:58467082 (GRCh38)
19:58978449 (GRCh37)
Canonical SPDI:: NC_000019.10:58467081:T:G
Gene:: ZNF324 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.58467082T>G, NC_000019.9:g.58978449T>G, XM_005258713.5:c.-1097T>G, NM_014347.3:c.-108T>G, NM_014347.2:c.-108T>G

Select item 148751209714.

rs1487512097 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 19:58466256 (GRCh38)
19:58977624 (GRCh37)
Canonical SPDI:: NC_000019.10:58466256:G:GG
Gene:: ZNF324 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.58466257dup, NC_000019.9:g.58977624dup

Select item 148729801515.

rs1487298015 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:58472330 (GRCh38)
19:58983697 (GRCh37)
Canonical SPDI:: NC_000019.10:58472329:A:C
Gene:: ZNF324 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.58472330A>C, NC_000019.9:g.58983697A>C, XM_005258713.5:c.*176A>C, XM_005258713.4:c.*176A>C, XM_005258713.3:c.*176A>C, XM_005258713.2:c.*176A>C, XM_005258713.1:c.*176A>C, NM_014347.3:c.*176A>C, NM_014347.2:c.*176A>C

Select item 148688231816.

rs1486882318 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:58465293 (GRCh38)
19:58976660 (GRCh37)
Canonical SPDI:: NC_000019.10:58465292:A:C
Gene:: ZNF324 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.58465293A>C, NC_000019.9:g.58976660A>C

Select item 148665809017.

rs1486658090 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:58471710 (GRCh38)
19:58983077 (GRCh37)
Canonical SPDI:: NC_000019.10:58471709:C:T
Gene:: ZNF324 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.58471710C>T, NC_000019.9:g.58983077C>T, XM_005258713.5:c.1233C>T, XM_005258713.4:c.1233C>T, XM_005258713.3:c.1233C>T, XM_005258713.2:c.1233C>T, XM_005258713.1:c.1233C>T, NM_014347.3:c.1218C>T, NM_014347.2:c.1218C>T

Select item 148651366618.

rs1486513666 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:58469758 (GRCh38)
19:58981125 (GRCh37)
Canonical SPDI:: NC_000019.10:58469757:T:A
Gene:: ZNF324 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000019.10:g.58469758T>A, NC_000019.9:g.58981125T>A, XM_005258713.5:c.167T>A, XM_005258713.4:c.167T>A, XM_005258713.3:c.167T>A, XM_005258713.2:c.167T>A, XM_005258713.1:c.167T>A, NM_014347.3:c.152T>A, NM_014347.2:c.152T>A, XP_005258770.1:p.Ile56Asn, NP_055162.1:p.Ile51Asn

Select item 148638544719.

rs1486385447 has merged into rs10590748 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:58465104 (GRCh38)
19:58976471 (GRCh37)
Canonical SPDI:: NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:58465093:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: ZNF324 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000019.10:g.58465104_58465115del, NC_000019.10:g.58465105_58465115del, NC_000019.10:g.58465106_58465115del, NC_000019.10:g.58465107_58465115del, NC_000019.10:g.58465108_58465115del, NC_000019.10:g.58465109_58465115del, NC_000019.10:g.58465110_58465115del, NC_000019.10:g.58465111_58465115del, NC_000019.10:g.58465112_58465115del, NC_000019.10:g.58465113_58465115del, NC_000019.10:g.58465114_58465115del, NC_000019.10:g.58465115del, NC_000019.10:g.58465115dup, NC_000019.10:g.58465114_58465115dup, NC_000019.10:g.58465113_58465115dup, NC_000019.10:g.58465112_58465115dup, NC_000019.9:g.58976471_58976482del, NC_000019.9:g.58976472_58976482del, NC_000019.9:g.58976473_58976482del, NC_000019.9:g.58976474_58976482del, NC_000019.9:g.58976475_58976482del, NC_000019.9:g.58976476_58976482del, NC_000019.9:g.58976477_58976482del, NC_000019.9:g.58976478_58976482del, NC_000019.9:g.58976479_58976482del, NC_000019.9:g.58976480_58976482del, NC_000019.9:g.58976481_58976482del, NC_000019.9:g.58976482del, NC_000019.9:g.58976482dup, NC_000019.9:g.58976481_58976482dup, NC_000019.9:g.58976480_58976482dup, NC_000019.9:g.58976479_58976482dup

Select item 148627401820.

rs1486274018 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:58468741 (GRCh38)
19:58980108 (GRCh37)
Canonical SPDI:: NC_000019.10:58468740:C:T
Gene:: ZNF324 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.58468741C>T, NC_000019.9:g.58980108C>T

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