SNP Links for Gene (Select 254028) - SNP

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Select item 14914437671.

rs1491443767 has merged into rs200096207 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 14:20593528 (GRCh38)
14:21061687 (GRCh37)
Canonical SPDI:: NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000014.9:20593517:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0.000088/1 (ALFA)
-=0.191484/50684 (TOPMED)
HGVS:: NC_000014.9:g.20593528_20593534del, NC_000014.9:g.20593531_20593534del, NC_000014.9:g.20593532_20593534del, NC_000014.9:g.20593533_20593534del, NC_000014.9:g.20593534del, NC_000014.9:g.20593534dup, NC_000014.9:g.20593533_20593534dup, NC_000014.8:g.21061687_21061693del, NC_000014.8:g.21061690_21061693del, NC_000014.8:g.21061691_21061693del, NC_000014.8:g.21061692_21061693del, NC_000014.8:g.21061693del, NC_000014.8:g.21061693dup, NC_000014.8:g.21061692_21061693dup

Select item 14911010142.

rs1491101014 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 14:20593517 (GRCh38)
14:21061676 (GRCh37)
Canonical SPDI:: NC_000014.9:20593516:CA:
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000014.9:g.20593517_20593518del, NC_000014.8:g.21061676_21061677del

Select item 14907398223.

rs1490739822 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20595421 (GRCh38)
14:21063580 (GRCh37)
Canonical SPDI:: NC_000014.9:20595420:A:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000014.9:g.20595421A>G, NC_000014.8:g.21063580A>G

Select item 14906031974.

rs1490603197 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20588824 (GRCh38)
14:21056983 (GRCh37)
Canonical SPDI:: NC_000014.9:20588823:T:C
Gene:: RNASE11 (Varview), RNASE11-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20588824T>C, NC_000014.8:g.21056983T>C

Select item 14905370615.

rs1490537061 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20596630 (GRCh38)
14:21064789 (GRCh37)
Canonical SPDI:: NC_000014.9:20596629:T:C
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20596630T>C, NC_000014.8:g.21064789T>C

Select item 14904809056.

rs1490480905 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:20598667 (GRCh38)
14:21066826 (GRCh37)
Canonical SPDI:: NC_000014.9:20598666:A:C
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20598667A>C, NC_000014.8:g.21066826A>C

Select item 14901713107.

rs1490171310 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 14:20597709 (GRCh38)
14:21065868 (GRCh37)
Canonical SPDI:: NC_000014.9:20597708:G:A,NC_000014.9:20597708:G:C,NC_000014.9:20597708:G:T
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20597709G>A, NC_000014.9:g.20597709G>C, NC_000014.9:g.20597709G>T, NC_000014.8:g.21065868G>A, NC_000014.8:g.21065868G>C, NC_000014.8:g.21065868G>T

Select item 14898753798.

rs1489875379 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20596806 (GRCh38)
14:21064965 (GRCh37)
Canonical SPDI:: NC_000014.9:20596805:A:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20596806A>G, NC_000014.8:g.21064965A>G, NR_122043.1:n.518A>G

Select item 14897805599.

rs1489780559 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:20589173 (GRCh38)
14:21057332 (GRCh37)
Canonical SPDI:: NC_000014.9:20589172:A:C
Gene:: RNASE11 (Varview), RNASE11-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20589173A>C, NC_000014.8:g.21057332A>C

Select item 148976235610.

rs1489762356 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20597238 (GRCh38)
14:21065397 (GRCh37)
Canonical SPDI:: NC_000014.9:20597237:G:A
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20597238G>A, NC_000014.8:g.21065397G>A

Select item 148966989311.

rs1489669893 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20598189 (GRCh38)
14:21066348 (GRCh37)
Canonical SPDI:: NC_000014.9:20598188:T:C
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20598189T>C, NC_000014.8:g.21066348T>C

Select item 148942654012.

rs1489426540 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>G
Chromosome:: no mapping
Canonical SPDI:

Select item 148935791013.

rs1489357910 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20593651 (GRCh38)
14:21061810 (GRCh37)
Canonical SPDI:: NC_000014.9:20593650:A:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000684/2 (KOREAN)
HGVS:: NC_000014.9:g.20593651A>G, NC_000014.8:g.21061810A>G

Select item 148933969114.

rs1489339691 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20597586 (GRCh38)
14:21065745 (GRCh37)
Canonical SPDI:: NC_000014.9:20597585:A:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.20597586A>G, NC_000014.8:g.21065745A>G

Select item 148932339015.

rs1489323390 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20594783 (GRCh38)
14:21062942 (GRCh37)
Canonical SPDI:: NC_000014.9:20594782:A:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20594783A>G, NC_000014.8:g.21062942A>G

Select item 148895939716.

rs1488959397 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 14:20605438 (GRCh38)
14:21073597 (GRCh37)
Canonical SPDI:: NC_000014.9:20605437:T:A,NC_000014.9:20605437:T:C
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20605438T>A, NC_000014.9:g.20605438T>C, NC_000014.8:g.21073597T>A, NC_000014.8:g.21073597T>C

Select item 148891850617.

rs1488918506 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:20598123 (GRCh38)
14:21066282 (GRCh37)
Canonical SPDI:: NC_000014.9:20598122:C:G
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20598123C>G, NC_000014.8:g.21066282C>G

Select item 148841699418.

rs1488416994 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20597772 (GRCh38)
14:21065931 (GRCh37)
Canonical SPDI:: NC_000014.9:20597771:G:A
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000014.9:g.20597772G>A, NC_000014.8:g.21065931G>A

Select item 148819077919.

rs1488190779 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 14:20607239 (GRCh38)
14:21075398 (GRCh37)
Canonical SPDI:: NC_000014.9:20607238:G:T
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20607239G>T, NC_000014.8:g.21075398G>T

Select item 148813435820.

rs1488134358 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20599927 (GRCh38)
14:21068086 (GRCh37)
Canonical SPDI:: NC_000014.9:20599926:C:T
Gene:: RNASE11-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.20599927C>T, NC_000014.8:g.21068086C>T

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