SNP Links for Gene (Select 246182) - SNP

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Select item 14896812401.

rs1489681240 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:112924042 (GRCh38)
1:113466664 (GRCh37)
Canonical SPDI:: NC_000001.11:112924041:T:C
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.112924042T>C, NC_000001.10:g.113466664T>C, NG_015880.2:g.36887A>G, NW_009646196.1:g.14621T>C, NR_002796.2:n.693T>C

Select item 14895658442.

rs1489565844 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:112925006 (GRCh38)
1:113467628 (GRCh37)
Canonical SPDI:: NC_000001.11:112925005:C:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.112925006C>T, NC_000001.10:g.113467628C>T, NG_015880.2:g.35923G>A, NW_009646196.1:g.15585C>T

Select item 14887567723.

rs1488756772 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:112922813 (GRCh38)
1:113465435 (GRCh37)
Canonical SPDI:: NC_000001.11:112922812:A:G
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000057/15 (TOPMED)
HGVS:: NC_000001.11:g.112922813A>G, NC_000001.10:g.113465435A>G, NG_015880.2:g.38116T>C, NW_009646196.1:g.13392A>G

Select item 14859180124.

rs1485918012 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:112921422 (GRCh38)
1:113464044 (GRCh37)
Canonical SPDI:: NC_000001.11:112921421:A:G
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.112921422A>G, NC_000001.10:g.113464044A>G, NG_015880.2:g.39507T>C, NW_009646196.1:g.12001A>G

Select item 14857627925.

rs1485762792 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:112922512 (GRCh38)
1:113465134 (GRCh37)
Canonical SPDI:: NC_000001.11:112922511:G:A,NC_000001.11:112922511:G:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.112922512G>A, NC_000001.11:g.112922512G>T, NC_000001.10:g.113465134G>A, NC_000001.10:g.113465134G>T, NG_015880.2:g.38417C>T, NG_015880.2:g.38417C>A, NW_009646196.1:g.13091G>A, NW_009646196.1:g.13091G>T

Select item 14847284296.

rs1484728429 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:112923804 (GRCh38)
1:113466426 (GRCh37)
Canonical SPDI:: NC_000001.11:112923803:G:C
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.112923804G>C, NC_000001.10:g.113466426G>C, NG_015880.2:g.37125C>G, NW_009646196.1:g.14383G>C, NR_002796.2:n.455G>C

Select item 14846163627.

rs1484616362 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:112924827 (GRCh38)
1:113467449 (GRCh37)
Canonical SPDI:: NC_000001.11:112924826:A:C
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.112924827A>C, NC_000001.10:g.113467449A>C, NG_015880.2:g.36102T>G, NW_009646196.1:g.15406A>C

Select item 14837046358.

rs1483704635 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:112923938 (GRCh38)
1:113466560 (GRCh37)
Canonical SPDI:: NC_000001.11:112923937:T:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.112923938T>A, NC_000001.10:g.113466560T>A, NG_015880.2:g.36991A>T, NW_009646196.1:g.14517T>A, NR_002796.2:n.589T>A

Select item 14836849409.

rs1483684940 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:112924130 (GRCh38)
1:113466752 (GRCh37)
Canonical SPDI:: NC_000001.11:112924129:C:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.112924130C>A, NC_000001.10:g.113466752C>A, NG_015880.2:g.36799G>T, NW_009646196.1:g.14709C>A, NR_002796.2:n.781C>A

Select item 148272564210.

rs1482725642 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:112923479 (GRCh38)
1:113466101 (GRCh37)
Canonical SPDI:: NC_000001.11:112923478:G:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.112923479G>A, NC_000001.10:g.113466101G>A, NG_015880.2:g.37450C>T, NW_009646196.1:g.14058G>A, NR_002796.2:n.130G>A

Select item 148265575411.

rs1482655754 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:112923901 (GRCh38)
1:113466523 (GRCh37)
Canonical SPDI:: NC_000001.11:112923900:C:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.112923901C>T, NC_000001.10:g.113466523C>T, NG_015880.2:g.37028G>A, NW_009646196.1:g.14480C>T, NR_002796.2:n.552C>T

Select item 148260576712.

rs1482605767 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:112922997 (GRCh38)
1:113465619 (GRCh37)
Canonical SPDI:: NC_000001.11:112922996:G:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.00006/1 (TOMMO)
HGVS:: NC_000001.11:g.112922997G>A, NC_000001.10:g.113465619G>A, NG_015880.2:g.37932C>T, NW_009646196.1:g.13576G>A

Select item 148109984213.

rs1481099842 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:112922482 (GRCh38)
1:113465104 (GRCh37)
Canonical SPDI:: NC_000001.11:112922481:T:C,NC_000001.11:112922481:T:G
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
C=0.000071/1 (TOMMO)
HGVS:: NC_000001.11:g.112922482T>C, NC_000001.11:g.112922482T>G, NC_000001.10:g.113465104T>C, NC_000001.10:g.113465104T>G, NG_015880.2:g.38447A>G, NG_015880.2:g.38447A>C, NW_009646196.1:g.13061T>C, NW_009646196.1:g.13061T>G

Select item 148079045314.

rs1480790453 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATGA>- [Show Flanks]
Chromosome:: 1:112922209 (GRCh38)
1:113464831 (GRCh37)
Canonical SPDI:: NC_000001.11:112922203:AATGAATGA:AATGA
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AATGA=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.112922205ATGA[1], NC_000001.10:g.113464827ATGA[1], NG_015880.2:g.38718CATT[1], NW_009646196.1:g.12784ATGA[1]

Select item 148026375015.

rs1480263750 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:112921835 (GRCh38)
1:113464457 (GRCh37)
Canonical SPDI:: NC_000001.11:112921834:T:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.112921835T>A, NC_000001.10:g.113464457T>A, NG_015880.2:g.39094A>T, NW_009646196.1:g.12414T>A

Select item 147929085516.

rs1479290855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:112923575 (GRCh38)
1:113466197 (GRCh37)
Canonical SPDI:: NC_000001.11:112923574:C:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000061/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.112923575C>T, NC_000001.10:g.113466197C>T, NG_015880.2:g.37354G>A, NW_009646196.1:g.14154C>T, NR_002796.2:n.226C>T

Select item 147718121217.

rs1477181212 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:112921473 (GRCh38)
1:113464095 (GRCh37)
Canonical SPDI:: NC_000001.11:112921472:A:G,NC_000001.11:112921472:A:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000177/3 (TOMMO)
HGVS:: NC_000001.11:g.112921473A>G, NC_000001.11:g.112921473A>T, NC_000001.10:g.113464095A>G, NC_000001.10:g.113464095A>T, NG_015880.2:g.39456T>C, NG_015880.2:g.39456T>A, NW_009646196.1:g.12052A>G, NW_009646196.1:g.12052A>T

Select item 147514720718.

rs1475147207 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:112924934 (GRCh38)
1:113467556 (GRCh37)
Canonical SPDI:: NC_000001.11:112924933:C:T
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.112924934C>T, NC_000001.10:g.113467556C>T, NG_015880.2:g.35995G>A, NW_009646196.1:g.15513C>T

Select item 147485120119.

rs1474851201 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:112921488 (GRCh38)
1:113464110 (GRCh37)
Canonical SPDI:: NC_000001.11:112921487:G:A
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.112921488G>A, NC_000001.10:g.113464110G>A, NG_015880.2:g.39441C>T, NW_009646196.1:g.12067G>A

Select item 147416936420.

rs1474169364 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:112924465 (GRCh38)
1:113467087 (GRCh37)
Canonical SPDI:: NC_000001.11:112924464:A:G
Gene:: SLC16A1 (Varview), AKR7A2P1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.112924465A>G, NC_000001.10:g.113467087A>G, NG_015880.2:g.36464T>C, NW_009646196.1:g.15044A>G, NR_002796.2:n.1116A>G

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