SNP Links for Gene (Select 23770) - SNP

Links from Gene

Items: 1 to 20 of 4023

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Select item 14909133401.

rs1490913340 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:18533279 (GRCh38)
19:18644089 (GRCh37)
Canonical SPDI:: NC_000019.10:18533278:A:C
Gene:: FKBP8 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.18533279A>C, NC_000019.9:g.18644089A>C, NM_012181.5:c.1014T>G, NM_012181.4:c.1014T>G, NM_012181.3:c.1014T>G, NM_001308373.2:c.1011T>G, NM_001308373.1:c.1011T>G

Select item 14906866092.

rs1490686609 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:18537935 (GRCh38)
19:18648745 (GRCh37)
Canonical SPDI:: NC_000019.10:18537934:T:C
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.18537935T>C, NC_000019.9:g.18648745T>C

Select item 14906440673.

rs1490644067 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:18531625 (GRCh38)
19:18642435 (GRCh37)
Canonical SPDI:: NC_000019.10:18531624:G:A
Gene:: FKBP8 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.18531625G>A, NC_000019.9:g.18642435G>A

Select item 14905789034.

rs1490578903 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:18537389 (GRCh38)
19:18648199 (GRCh37)
Canonical SPDI:: NC_000019.10:18537388:G:A
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.18537389G>A, NC_000019.9:g.18648199G>A

Select item 14904727865.

rs1490472786 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:18541635 (GRCh38)
19:18652445 (GRCh37)
Canonical SPDI:: NC_000019.10:18541634:G:A,NC_000019.10:18541634:G:C
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.18541635G>A, NC_000019.10:g.18541635G>C, NC_000019.9:g.18652445G>A, NC_000019.9:g.18652445G>C

Select item 14904555786.

rs1490455578 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:18543792 (GRCh38)
19:18654602 (GRCh37)
Canonical SPDI:: NC_000019.10:18543791:G:A
Gene:: FKBP8 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.18543792G>A, NC_000019.9:g.18654602G>A

Select item 14904331677.

rs1490433167 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:18531674 (GRCh38)
19:18642484 (GRCh37)
Canonical SPDI:: NC_000019.10:18531673:A:T
Gene:: FKBP8 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.18531674A>T, NC_000019.9:g.18642484A>T

Select item 14904295318.

rs1490429531 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:18544443 (GRCh38)
19:18655253 (GRCh37)
Canonical SPDI:: NC_000019.10:18544442:C:T
Gene:: FKBP8 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.18544443C>T, NC_000019.9:g.18655253C>T

Select item 14903997999.

rs1490399799 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:18544717 (GRCh38)
19:18655527 (GRCh37)
Canonical SPDI:: NC_000019.10:18544716:C:T
Gene:: FKBP8 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18544717C>T, NC_000019.9:g.18655527C>T

Select item 149007926810.

rs1490079268 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:18531265 (GRCh38)
19:18642075 (GRCh37)
Canonical SPDI:: NC_000019.10:18531264:A:G
Gene:: FKBP8 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.18531265A>G, NC_000019.9:g.18642075A>G

Select item 148990415211.

rs1489904152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:18545570 (GRCh38)
19:18656380 (GRCh37)
Canonical SPDI:: NC_000019.10:18545569:G:T
Gene:: FKBP8 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18545570G>T, NC_000019.9:g.18656380G>T

Select item 148933629712.

rs1489336297 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:18539056 (GRCh38)
19:18649866 (GRCh37)
Canonical SPDI:: NC_000019.10:18539055:C:T
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18539056C>T, NC_000019.9:g.18649866C>T

Select item 148931972913.

rs1489319729 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:18535194 (GRCh38)
19:18646004 (GRCh37)
Canonical SPDI:: NC_000019.10:18535193:A:G
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18535194A>G, NC_000019.9:g.18646004A>G

Select item 148931729714.

rs1489317297 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:18541873 (GRCh38)
19:18652683 (GRCh37)
Canonical SPDI:: NC_000019.10:18541872:G:A,NC_000019.10:18541872:G:C
Gene:: FKBP8 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000224/1 (ALFA)
A=0.000008/2 (GnomAD_exomes)
C=0.000014/2 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000019.10:g.18541873G>A, NC_000019.10:g.18541873G>C, NC_000019.9:g.18652683G>A, NC_000019.9:g.18652683G>C, NM_012181.5:c.98C>T, NM_012181.5:c.98C>G, NM_012181.4:c.98C>T, NM_012181.4:c.98C>G, NM_012181.3:c.98C>T, NM_012181.3:c.98C>G, NM_001308373.2:c.98C>T, NM_001308373.2:c.98C>G, NM_001308373.1:c.98C>T, NM_001308373.1:c.98C>G, NP_036313.3:p.Ala33Val, NP_036313.3:p.Ala33Gly, NP_001295302.1:p.Ala33Val, NP_001295302.1:p.Ala33Gly

Select item 148893815815.

rs1488938158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:18541655 (GRCh38)
19:18652465 (GRCh37)
Canonical SPDI:: NC_000019.10:18541654:C:T
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.18541655C>T, NC_000019.9:g.18652465C>T

Select item 148890267716.

rs1488902677 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:18533763 (GRCh38)
19:18644573 (GRCh37)
Canonical SPDI:: NC_000019.10:18533762:T:C
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18533763T>C, NC_000019.9:g.18644573T>C

Select item 148869984717.

rs1488699847 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:18545860 (GRCh38)
19:18656670 (GRCh37)
Canonical SPDI:: NC_000019.10:18545859:C:A
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.18545860C>A, NC_000019.9:g.18656670C>A

Select item 148851168218.

rs1488511682 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:18542450 (GRCh38)
19:18653260 (GRCh37)
Canonical SPDI:: NC_000019.10:18542449:G:A
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.18542450G>A, NC_000019.9:g.18653260G>A

Select item 148841598219.

rs1488415982 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:18543556 (GRCh38)
19:18654366 (GRCh37)
Canonical SPDI:: NC_000019.10:18543555:C:A,NC_000019.10:18543555:C:G,NC_000019.10:18543555:C:T
Gene:: FKBP8 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.18543556C>A, NC_000019.10:g.18543556C>G, NC_000019.10:g.18543556C>T, NC_000019.9:g.18654366C>A, NC_000019.9:g.18654366C>G, NC_000019.9:g.18654366C>T, NM_012181.5:c.-96G>T, NM_012181.5:c.-96G>C, NM_012181.5:c.-96G>A, NM_012181.4:c.-96G>T, NM_012181.4:c.-96G>C, NM_012181.4:c.-96G>A, NM_012181.3:c.-96G>T, NM_012181.3:c.-96G>C, NM_012181.3:c.-96G>A, NM_001308373.2:c.-96G>T, NM_001308373.2:c.-96G>C, NM_001308373.2:c.-96G>A, NM_001308373.1:c.-96G>T, NM_001308373.1:c.-96G>C, NM_001308373.1:c.-96G>A

Select item 148822561620.

rs1488225616 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 19:18533836 (GRCh38)
19:18644646 (GRCh37)
Canonical SPDI:: NC_000019.10:18533835:A:C,NC_000019.10:18533835:A:T
Gene:: FKBP8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000212/4 (TOMMO)
HGVS:: NC_000019.10:g.18533836A>C, NC_000019.10:g.18533836A>T, NC_000019.9:g.18644646A>C, NC_000019.9:g.18644646A>T

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