SNP Links for Gene (Select 2353) - SNP

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Select item 14898163121.

rs1489816312 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:75281538 (GRCh38)
14:75748241 (GRCh37)
Canonical SPDI:: NC_000014.9:75281537:C:A,NC_000014.9:75281537:C:T
Gene:: FOS (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.75281538C>A, NC_000014.9:g.75281538C>T, NC_000014.8:g.75748241C>A, NC_000014.8:g.75748241C>T, NG_029673.1:g.7761C>A, NG_029673.1:g.7761C>T, NM_005252.4:c.*114C>A, NM_005252.4:c.*114C>T, NM_005252.3:c.*114C>A, NM_005252.3:c.*114C>T

Select item 14886661582.

rs1488666158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:75277171 (GRCh38)
14:75743874 (GRCh37)
Canonical SPDI:: NC_000014.9:75277170:C:A
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.75277171C>A, NC_000014.8:g.75743874C>A, NG_029673.1:g.3394C>A

Select item 14882357283.

rs1488235728 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:75280579 (GRCh38)
14:75747282 (GRCh37)
Canonical SPDI:: NC_000014.9:75280578:A:C
Gene:: FOS (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000087/2 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000012/3 (GnomAD_exomes)
C=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.75280579A>C, NC_000014.8:g.75747282A>C, NG_029673.1:g.6802A>C, NM_005252.4:c.413A>C, NM_005252.3:c.413A>C, NP_005243.1:p.Glu138Ala

Select item 14876891204.

rs1487689120 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 14:75280293 (GRCh38)
14:75746996 (GRCh37)
Canonical SPDI:: NC_000014.9:75280292:T:A,NC_000014.9:75280292:T:C
Gene:: FOS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/1 (GnomAD_exomes)
C=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.75280293T>A, NC_000014.9:g.75280293T>C, NC_000014.8:g.75746996T>A, NC_000014.8:g.75746996T>C, NG_029673.1:g.6516T>A, NG_029673.1:g.6516T>C

Select item 14874350245.

rs1487435024 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:75279045 (GRCh38)
14:75745748 (GRCh37)
Canonical SPDI:: NC_000014.9:75279044:C:T
Gene:: FOS (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.75279045C>T, NC_000014.8:g.75745748C>T, NG_029673.1:g.5268C>T, NM_005252.4:c.63C>T, NM_005252.3:c.63C>T

Select item 14874271696.

rs1487427169 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:75282564 (GRCh38)
14:75749267 (GRCh37)
Canonical SPDI:: NC_000014.9:75282563:G:A
Gene:: FOS (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.75282564G>A, NC_000014.8:g.75749267G>A, NG_029673.1:g.8787G>A

Select item 14864478717.

rs1486447871 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:75278449 (GRCh38)
14:75745152 (GRCh37)
Canonical SPDI:: NC_000014.9:75278448:A:C
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.0077/22 (KOREAN)
HGVS:: NC_000014.9:g.75278449A>C, NC_000014.8:g.75745152A>C, NG_029673.1:g.4672A>C

Select item 14863790758.

rs1486379075 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:75278493 (GRCh38)
14:75745196 (GRCh37)
Canonical SPDI:: NC_000014.9:75278492:C:T
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000042/11 (TOPMED)
HGVS:: NC_000014.9:g.75278493C>T, NC_000014.8:g.75745196C>T, NG_029673.1:g.4716C>T

Select item 14863629729.

rs1486362972 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:75277184 (GRCh38)
14:75743887 (GRCh37)
Canonical SPDI:: NC_000014.9:75277183:G:A
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.75277184G>A, NC_000014.8:g.75743887G>A, NG_029673.1:g.3407G>A

Select item 148617259810.

rs1486172598 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 14:75282547 (GRCh38)
14:75749250 (GRCh37)
Canonical SPDI:: NC_000014.9:75282546:G:
Gene:: FOS (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.75282547del, NC_000014.8:g.75749250del, NG_029673.1:g.8770del

Select item 148612059711.

rs1486120597 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:75281304 (GRCh38)
14:75748007 (GRCh37)
Canonical SPDI:: NC_000014.9:75281303:C:T
Gene:: FOS (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.75281304C>T, NC_000014.8:g.75748007C>T, NG_029673.1:g.7527C>T, NM_005252.4:c.1023C>T, NM_005252.3:c.1023C>T

Select item 148593674312.

rs1485936743 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:75277524 (GRCh38)
14:75744227 (GRCh37)
Canonical SPDI:: NC_000014.9:75277523:G:A,NC_000014.9:75277523:G:T
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000014.9:g.75277524G>A, NC_000014.9:g.75277524G>T, NC_000014.8:g.75744227G>A, NC_000014.8:g.75744227G>T, NG_029673.1:g.3747G>A, NG_029673.1:g.3747G>T

Select item 148422387913.

rs1484223879 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 14:75279619 (GRCh38)
14:75746322 (GRCh37)
Canonical SPDI:: NC_000014.9:75279618:T:A
Gene:: FOS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.75279619T>A, NC_000014.8:g.75746322T>A, NG_029673.1:g.5842T>A

Select item 148312931414.

rs1483129314 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:75278854 (GRCh38)
14:75745557 (GRCh37)
Canonical SPDI:: NC_000014.9:75278853:A:G
Gene:: FOS (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000026/7 (TOPMED)
HGVS:: NC_000014.9:g.75278854A>G, NC_000014.8:g.75745557A>G, NG_029673.1:g.5077A>G, NM_005252.4:c.-129A>G, NM_005252.3:c.-129A>G

Select item 148266360315.

rs1482663603 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCCCCCAGCCGCGGCCCCCGCCTCCCC>- [Show Flanks]
Chromosome:: 14:75278413 (GRCh38)
14:75745116 (GRCh37)
Canonical SPDI:: NC_000014.9:75278401:CCCGCCTCCCCTCCCCCAGCCGCGGCCCCCGCCTCCCC:CCCGCCTCCCC
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: CCCGCCTCCCC=0./0 (ALFA)
-=0.000023/6 (TOPMED)
HGVS:: NC_000014.9:g.75278413_75278439del, NC_000014.8:g.75745116_75745142del, NG_029673.1:g.4636_4662del

Select item 148233738616.

rs1482337386 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:75277916 (GRCh38)
14:75744619 (GRCh37)
Canonical SPDI:: NC_000014.9:75277915:T:C
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.75277916T>C, NC_000014.8:g.75744619T>C, NG_029673.1:g.4139T>C

Select item 148226470817.

rs1482264708 [Homo sapiens]

Variant type:: DELINS
Alleles:: TC>- [Show Flanks]
Chromosome:: 14:75278776 (GRCh38)
14:75745479 (GRCh37)
Canonical SPDI:: NC_000014.9:75278774:CTC:C
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.75278776_75278777del, NC_000014.8:g.75745479_75745480del, NG_029673.1:g.4999_5000del

Select item 148165240418.

rs1481652404 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 14:75277905 (GRCh38)
14:75744608 (GRCh37)
Canonical SPDI:: NC_000014.9:75277904:T:G
Gene:: FOS (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.75277905T>G, NC_000014.8:g.75744608T>G, NG_029673.1:g.4128T>G

Select item 147879737919.

rs1478797379 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 14:75279964 (GRCh38)
14:75746668 (GRCh37)
Canonical SPDI:: NC_000014.9:75279964:T:TT
Gene:: FOS (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.75279965dup, NC_000014.8:g.75746668dup, NG_029673.1:g.6188dup, NM_005252.4:c.230dup, NM_005252.3:c.230dup, NP_005243.1:p.Gln78fs

Select item 147879235620.

rs1478792356 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:75278996 (GRCh38)
14:75745699 (GRCh37)
Canonical SPDI:: NC_000014.9:75278995:G:A
Gene:: FOS (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000014.9:g.75278996G>A, NC_000014.8:g.75745699G>A, NG_029673.1:g.5219G>A, NM_005252.4:c.14G>A, NM_005252.3:c.14G>A, NP_005243.1:p.Gly5Asp

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