SNP Links for Gene (Select 23237) - SNP

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Select item 14908558171.

rs1490855817 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:142615053 (GRCh38)
8:143696414 (GRCh37)
Canonical SPDI:: NC_000008.11:142615052:C:T
Gene:: ARC (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.142615053C>T, NC_000008.10:g.143696414C>T

Select item 14904112462.

rs1490411246 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:142611571 (GRCh38)
8:143692932 (GRCh37)
Canonical SPDI:: NC_000008.11:142611570:C:T
Gene:: ARC (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.142611571C>T, NC_000008.10:g.143692932C>T, NM_015193.5:c.*1029G>A, NM_015193.4:c.*1029G>A, XM_047421612.1:c.*1279G>A

Select item 14894267203.

rs1489426720 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:142613550 (GRCh38)
8:143694911 (GRCh37)
Canonical SPDI:: NC_000008.11:142613549:T:C
Gene:: ARC (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000063/2 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/2 (GnomAD_exomes)
C=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.142613550T>C, NC_000008.10:g.143694911T>C, NM_015193.5:c.722A>G, NM_015193.4:c.722A>G, XM_047421612.1:c.722A>G, NP_056008.1:p.Gln241Arg, XP_047277568.1:p.Gln241Arg

Select item 14889602394.

rs1488960239 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 8:142613160 (GRCh38)
8:143694521 (GRCh37)
Canonical SPDI:: NC_000008.11:142613159:G:A,NC_000008.11:142613159:G:T
Gene:: ARC (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000009/2 (GnomAD_exomes)
HGVS:: NC_000008.11:g.142613160G>A, NC_000008.11:g.142613160G>T, NC_000008.10:g.143694521G>A, NC_000008.10:g.143694521G>T, NM_015193.5:c.1112C>T, NM_015193.5:c.1112C>A, NM_015193.4:c.1112C>T, NM_015193.4:c.1112C>A, XM_047421612.1:c.1112C>T, XM_047421612.1:c.1112C>A, NP_056008.1:p.Pro371Leu, NP_056008.1:p.Pro371Gln, XP_047277568.1:p.Pro371Leu, XP_047277568.1:p.Pro371Gln

Select item 14888892595.

rs1488889259 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:142615844 (GRCh38)
8:143697205 (GRCh37)
Canonical SPDI:: NC_000008.11:142615843:C:A,NC_000008.11:142615843:C:T
Gene:: ARC (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.142615844C>A, NC_000008.11:g.142615844C>T, NC_000008.10:g.143697205C>A, NC_000008.10:g.143697205C>T

Select item 14883458026.

rs1488345802 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 8:142615941 (GRCh38)
8:143697302 (GRCh37)
Canonical SPDI:: NC_000008.11:142615940:CCCCCC:CCCCC
Gene:: ARC (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCC=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000016/1 (GnomAD)
HGVS:: NC_000008.11:g.142615946del, NC_000008.10:g.143697307del

Select item 14880772177.

rs1488077217 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:142611908 (GRCh38)
8:143693269 (GRCh37)
Canonical SPDI:: NC_000008.11:142611907:G:A
Gene:: ARC (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000008.11:g.142611908G>A, NC_000008.10:g.143693269G>A, XM_047421612.1:c.*942C>T

Select item 14876399818.

rs1487639981 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:142614293 (GRCh38)
8:143695654 (GRCh37)
Canonical SPDI:: NC_000008.11:142614292:G:T
Gene:: ARC (Varview)
Functional Consequence:: 5_prime_UTR_variant
HGVS:: NC_000008.11:g.142614293G>T, NC_000008.10:g.143695654G>T, NM_015193.5:c.-22C>A, NM_015193.4:c.-22C>A, XM_047421612.1:c.-22C>A

Select item 14868731499.

rs1486873149 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:142615101 (GRCh38)
8:143696462 (GRCh37)
Canonical SPDI:: NC_000008.11:142615100:G:A
Gene:: ARC (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.142615101G>A, NC_000008.10:g.143696462G>A

Select item 148684813810.

rs1486848138 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:142614744 (GRCh38)
8:143696105 (GRCh37)
Canonical SPDI:: NC_000008.11:142614743:G:T
Gene:: ARC (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.142614744G>T, NC_000008.10:g.143696105G>T

Select item 148684192311.

rs1486841923 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 8:142614366 (GRCh38)
8:143695727 (GRCh37)
Canonical SPDI:: NC_000008.11:142614365:T:G
Gene:: ARC (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.142614366T>G, NC_000008.10:g.143695727T>G, NM_015193.5:c.-95A>C, NM_015193.4:c.-95A>C, XM_047421612.1:c.-95A>C

Select item 148604880412.

rs1486048804 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 8:142614631 (GRCh38)
8:143695992 (GRCh37)
Canonical SPDI:: NC_000008.11:142614630:C:A,NC_000008.11:142614630:C:G,NC_000008.11:142614630:C:T
Gene:: ARC (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00004/1 (TOMMO)
HGVS:: NC_000008.11:g.142614631C>A, NC_000008.11:g.142614631C>G, NC_000008.11:g.142614631C>T, NC_000008.10:g.143695992C>A, NC_000008.10:g.143695992C>G, NC_000008.10:g.143695992C>T

Select item 148570400613.

rs1485704006 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 8:142616271 (GRCh38)
8:143697632 (GRCh37)
Canonical SPDI:: NC_000008.11:142616270:G:C
Gene:: ARC (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.142616271G>C, NC_000008.10:g.143697632G>C

Select item 148567124314.

rs1485671243 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:142613673 (GRCh38)
8:143695034 (GRCh37)
Canonical SPDI:: NC_000008.11:142613672:C:T
Gene:: ARC (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.142613673C>T, NC_000008.10:g.143695034C>T, NM_015193.5:c.599G>A, NM_015193.4:c.599G>A, XM_047421612.1:c.599G>A, NP_056008.1:p.Gly200Asp, XP_047277568.1:p.Gly200Asp

Select item 148487500915.

rs1484875009 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCCA>- [Show Flanks]
Chromosome:: 8:142611455 (GRCh38)
8:143692816 (GRCh37)
Canonical SPDI:: NC_000008.11:142611453:AGCCA:A
Gene:: ARC (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.142611455_142611458del, NC_000008.10:g.143692816_143692819del, NM_015193.5:c.*1143_*1146del, NM_015193.4:c.*1143_*1146del, XM_047421612.1:c.*1393_*1396del

Select item 148440849016.

rs1484408490 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:142612885 (GRCh38)
8:143694246 (GRCh37)
Canonical SPDI:: NC_000008.11:142612884:G:T
Gene:: ARC (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.142612885G>T, NC_000008.10:g.143694246G>T, NM_015193.5:c.*196C>A, NM_015193.4:c.*196C>A, XM_047421612.1:c.*196C>A

Select item 148308987117.

rs1483089871 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:142611790 (GRCh38)
8:143693151 (GRCh37)
Canonical SPDI:: NC_000008.11:142611789:G:A
Gene:: ARC (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.142611790G>A, NC_000008.10:g.143693151G>A, NM_015193.5:c.*810C>T, NM_015193.4:c.*810C>T, XM_047421612.1:c.*1060C>T

Select item 148226716118.

rs1482267161 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 8:142614952 (GRCh38)
8:143696313 (GRCh37)
Canonical SPDI:: NC_000008.11:142614951:G:A,NC_000008.11:142614951:G:C,NC_000008.11:142614951:G:T
Gene:: ARC (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000008.11:g.142614952G>A, NC_000008.11:g.142614952G>C, NC_000008.11:g.142614952G>T, NC_000008.10:g.143696313G>A, NC_000008.10:g.143696313G>C, NC_000008.10:g.143696313G>T

Select item 148216676619.

rs1482166766 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:142614676 (GRCh38)
8:143696037 (GRCh37)
Canonical SPDI:: NC_000008.11:142614675:G:A,NC_000008.11:142614675:G:C
Gene:: ARC (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.142614676G>A, NC_000008.11:g.142614676G>C, NC_000008.10:g.143696037G>A, NC_000008.10:g.143696037G>C

Select item 148210536520.

rs1482105365 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:142610824 (GRCh38)
8:143692185 (GRCh37)
Canonical SPDI:: NC_000008.11:142610823:C:T
Gene:: ARC (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.142610824C>T, NC_000008.10:g.143692185C>T

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