SNP Links for Gene (Select 2308) - SNP

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Select item 14915816701.

rs1491581670 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AC [Show Flanks]
Chromosome:: 13:40585335 (GRCh38)
13:41159473 (GRCh37)
Canonical SPDI:: NC_000013.11:40585335:C:CAC
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: CAC=0./0 (ALFA)
CA=0.00002/2 (GnomAD)
HGVS:: NC_000013.11:g.40585336_40585337insAC, NC_000013.10:g.41159473_41159474insAC, NG_023244.1:g.86262_86263insTG, XM_011535010.3:c.-22729_-22728insTG

Select item 14913601032.

rs1491360103 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 13:40623938 (GRCh38)
13:41198075 (GRCh37)
Canonical SPDI:: NC_000013.11:40623937:AT:
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/1 (GnomAD)
HGVS:: NC_000013.11:g.40623938_40623939del, NC_000013.10:g.41198075_41198076del, NG_023244.1:g.47659_47660del, XM_011535008.3:c.-9703_-9702del

Select item 14913577173.

rs1491357717 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 13:40662170 (GRCh38)
13:41236307 (GRCh37)
Canonical SPDI:: NC_000013.11:40662169:CA:
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000013.11:g.40662170_40662171del, NC_000013.10:g.41236307_41236308del, NG_023244.1:g.9427_9428del

Select item 14913308244.

rs1491330824 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT [Show Flanks]
Chromosome:: 13:40640798 (GRCh38)
13:41214936 (GRCh37)
Canonical SPDI:: NC_000013.11:40640798:T:TGT
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: TG=0.00011/6 (GnomAD)
HGVS:: NC_000013.11:g.40640799_40640800insGT, NC_000013.10:g.41214936_41214937insGT, NG_023244.1:g.30799_30800insCA

Select item 14912993855.

rs1491299385 has merged into rs57350461 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:40662182 (GRCh38)
13:41236319 (GRCh37)
Canonical SPDI:: NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40662170:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FOXO1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.001107/293 (TOPMED)
-=0.318291/1594 (1000Genomes)
HGVS:: NC_000013.11:g.40662182_40662196del, NC_000013.11:g.40662183_40662196del, NC_000013.11:g.40662184_40662196del, NC_000013.11:g.40662185_40662196del, NC_000013.11:g.40662186_40662196del, NC_000013.11:g.40662187_40662196del, NC_000013.11:g.40662188_40662196del, NC_000013.11:g.40662189_40662196del, NC_000013.11:g.40662190_40662196del, NC_000013.11:g.40662191_40662196del, NC_000013.11:g.40662192_40662196del, NC_000013.11:g.40662193_40662196del, NC_000013.11:g.40662194_40662196del, NC_000013.11:g.40662195_40662196del, NC_000013.11:g.40662196del, NC_000013.11:g.40662196dup, NC_000013.11:g.40662195_40662196dup, NC_000013.11:g.40662194_40662196dup, NC_000013.11:g.40662193_40662196dup, NC_000013.10:g.41236319_41236333del, NC_000013.10:g.41236320_41236333del, NC_000013.10:g.41236321_41236333del, NC_000013.10:g.41236322_41236333del, NC_000013.10:g.41236323_41236333del, NC_000013.10:g.41236324_41236333del, NC_000013.10:g.41236325_41236333del, NC_000013.10:g.41236326_41236333del, NC_000013.10:g.41236327_41236333del, NC_000013.10:g.41236328_41236333del, NC_000013.10:g.41236329_41236333del, NC_000013.10:g.41236330_41236333del, NC_000013.10:g.41236331_41236333del, NC_000013.10:g.41236332_41236333del, NC_000013.10:g.41236333del, NC_000013.10:g.41236333dup, NC_000013.10:g.41236332_41236333dup, NC_000013.10:g.41236331_41236333dup, NC_000013.10:g.41236330_41236333dup, NG_023244.1:g.9413_9427del, NG_023244.1:g.9414_9427del, NG_023244.1:g.9415_9427del, NG_023244.1:g.9416_9427del, NG_023244.1:g.9417_9427del, NG_023244.1:g.9418_9427del, NG_023244.1:g.9419_9427del, NG_023244.1:g.9420_9427del, NG_023244.1:g.9421_9427del, NG_023244.1:g.9422_9427del, NG_023244.1:g.9423_9427del, NG_023244.1:g.9424_9427del, NG_023244.1:g.9425_9427del, NG_023244.1:g.9426_9427del, NG_023244.1:g.9427del, NG_023244.1:g.9427dup, NG_023244.1:g.9426_9427dup, NG_023244.1:g.9425_9427dup, NG_023244.1:g.9424_9427dup

Select item 14912850796.

rs1491285079 has merged into rs60741629 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:40603362 (GRCh38)
13:41177499 (GRCh37)
Canonical SPDI:: NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40603353:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FOXO1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.3684/14 (GENOME_DK)
HGVS:: NC_000013.11:g.40603362_40603374del, NC_000013.11:g.40603363_40603374del, NC_000013.11:g.40603364_40603374del, NC_000013.11:g.40603365_40603374del, NC_000013.11:g.40603366_40603374del, NC_000013.11:g.40603367_40603374del, NC_000013.11:g.40603368_40603374del, NC_000013.11:g.40603369_40603374del, NC_000013.11:g.40603370_40603374del, NC_000013.11:g.40603371_40603374del, NC_000013.11:g.40603372_40603374del, NC_000013.11:g.40603373_40603374del, NC_000013.11:g.40603374del, NC_000013.11:g.40603374dup, NC_000013.11:g.40603373_40603374dup, NC_000013.11:g.40603372_40603374dup, NC_000013.11:g.40603371_40603374dup, NC_000013.11:g.40603370_40603374dup, NC_000013.11:g.40603369_40603374dup, NC_000013.11:g.40603368_40603374dup, NC_000013.11:g.40603365_40603374dup, NC_000013.11:g.40603363_40603374dup, NC_000013.11:g.40603355_40603374dup, NC_000013.10:g.41177499_41177511del, NC_000013.10:g.41177500_41177511del, NC_000013.10:g.41177501_41177511del, NC_000013.10:g.41177502_41177511del, NC_000013.10:g.41177503_41177511del, NC_000013.10:g.41177504_41177511del, NC_000013.10:g.41177505_41177511del, NC_000013.10:g.41177506_41177511del, NC_000013.10:g.41177507_41177511del, NC_000013.10:g.41177508_41177511del, NC_000013.10:g.41177509_41177511del, NC_000013.10:g.41177510_41177511del, NC_000013.10:g.41177511del, NC_000013.10:g.41177511dup, NC_000013.10:g.41177510_41177511dup, NC_000013.10:g.41177509_41177511dup, NC_000013.10:g.41177508_41177511dup, NC_000013.10:g.41177507_41177511dup, NC_000013.10:g.41177506_41177511dup, NC_000013.10:g.41177505_41177511dup, NC_000013.10:g.41177502_41177511dup, NC_000013.10:g.41177500_41177511dup, NC_000013.10:g.41177492_41177511dup, NG_023244.1:g.68232_68244del, NG_023244.1:g.68233_68244del, NG_023244.1:g.68234_68244del, NG_023244.1:g.68235_68244del, NG_023244.1:g.68236_68244del, NG_023244.1:g.68237_68244del, NG_023244.1:g.68238_68244del, NG_023244.1:g.68239_68244del, NG_023244.1:g.68240_68244del, NG_023244.1:g.68241_68244del, NG_023244.1:g.68242_68244del, NG_023244.1:g.68243_68244del, NG_023244.1:g.68244del, NG_023244.1:g.68244dup, NG_023244.1:g.68243_68244dup, NG_023244.1:g.68242_68244dup, NG_023244.1:g.68241_68244dup, NG_023244.1:g.68240_68244dup, NG_023244.1:g.68239_68244dup, NG_023244.1:g.68238_68244dup, NG_023244.1:g.68235_68244dup, NG_023244.1:g.68233_68244dup, NG_023244.1:g.68225_68244dup

Select item 14912811167.

rs1491281116 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>-,GTGT [Show Flanks]
Chromosome:: 13:40603472 (GRCh38)
13:41177609 (GRCh37)
Canonical SPDI:: NC_000013.11:40603462:TGTGTGTGTGT:TGTGTGTGT,NC_000013.11:40603462:TGTGTGTGTGT:TGTGTGTGTGTGT
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGT=0.000071/1 (ALFA)
TG=0.000036/5 (GnomAD)
TG=0.000057/15 (TOPMED)
TG=0.000546/1 (Korea1K)
TG=0.001062/18 (TOMMO)
HGVS:: NC_000013.11:g.40603464GT[4], NC_000013.11:g.40603464GT[6], NC_000013.10:g.41177601GT[4], NC_000013.10:g.41177601GT[6], NG_023244.1:g.68126CA[4], NG_023244.1:g.68126CA[6]

Select item 14912678378.

rs1491267837 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: 13:40620798 (GRCh38)
13:41194935 (GRCh37)
Canonical SPDI:: NC_000013.11:40620797:GC:
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000368/6 (ALFA)
-=0.000779/13 (TOMMO)
-=0.004586/570 (GnomAD)
-=0.005778/37 (1000Genomes)
HGVS:: NC_000013.11:g.40620798_40620799del, NC_000013.10:g.41194935_41194936del, NG_028876.2:g.2261_2262del, NG_023244.1:g.50799_50800del, XM_011535008.3:c.-6563_-6562del

Select item 14911935749.

rs1491193574 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 13:40603353 (GRCh38)
13:41177490 (GRCh37)
Canonical SPDI:: NC_000013.11:40603352:CA:
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000013.11:g.40603353_40603354del, NC_000013.10:g.41177490_41177491del, NG_023244.1:g.68244_68245del

Select item 149115135710.

rs1491151357 has merged into rs34314244 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACACACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACAC [Show Flanks]
Chromosome:: 13:40628371 (GRCh38)
13:41202508 (GRCh37)
Canonical SPDI:: NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000013.11:40628356:ACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACAC=0./0 (ALFA)
HGVS:: NC_000013.11:g.40628357AC[7], NC_000013.11:g.40628357AC[8], NC_000013.11:g.40628357AC[9], NC_000013.11:g.40628357AC[10], NC_000013.11:g.40628357AC[11], NC_000013.11:g.40628357AC[12], NC_000013.11:g.40628357AC[13], NC_000013.11:g.40628357AC[14], NC_000013.11:g.40628357AC[15], NC_000013.11:g.40628357AC[16], NC_000013.11:g.40628357AC[18], NC_000013.11:g.40628357AC[19], NC_000013.11:g.40628357AC[20], NC_000013.11:g.40628357AC[21], NC_000013.11:g.40628357AC[22], NC_000013.11:g.40628357AC[23], NC_000013.11:g.40628357AC[24], NC_000013.11:g.40628357AC[25], NC_000013.11:g.40628357AC[26], NC_000013.11:g.40628357AC[27], NC_000013.11:g.40628357AC[28], NC_000013.11:g.40628357AC[29], NC_000013.11:g.40628357AC[30], NC_000013.10:g.41202494AC[7], NC_000013.10:g.41202494AC[8], NC_000013.10:g.41202494AC[9], NC_000013.10:g.41202494AC[10], NC_000013.10:g.41202494AC[11], NC_000013.10:g.41202494AC[12], NC_000013.10:g.41202494AC[13], NC_000013.10:g.41202494AC[14], NC_000013.10:g.41202494AC[15], NC_000013.10:g.41202494AC[16], NC_000013.10:g.41202494AC[18], NC_000013.10:g.41202494AC[19], NC_000013.10:g.41202494AC[20], NC_000013.10:g.41202494AC[21], NC_000013.10:g.41202494AC[22], NC_000013.10:g.41202494AC[23], NC_000013.10:g.41202494AC[24], NC_000013.10:g.41202494AC[25], NC_000013.10:g.41202494AC[26], NC_000013.10:g.41202494AC[27], NC_000013.10:g.41202494AC[28], NC_000013.10:g.41202494AC[29], NC_000013.10:g.41202494AC[30], NG_023244.1:g.43208GT[7], NG_023244.1:g.43208GT[8], NG_023244.1:g.43208GT[9], NG_023244.1:g.43208GT[10], NG_023244.1:g.43208GT[11], NG_023244.1:g.43208GT[12], NG_023244.1:g.43208GT[13], NG_023244.1:g.43208GT[14], NG_023244.1:g.43208GT[15], NG_023244.1:g.43208GT[16], NG_023244.1:g.43208GT[18], NG_023244.1:g.43208GT[19], NG_023244.1:g.43208GT[20], NG_023244.1:g.43208GT[21], NG_023244.1:g.43208GT[22], NG_023244.1:g.43208GT[23], NG_023244.1:g.43208GT[24], NG_023244.1:g.43208GT[25], NG_023244.1:g.43208GT[26], NG_023244.1:g.43208GT[27], NG_023244.1:g.43208GT[28], NG_023244.1:g.43208GT[29], NG_023244.1:g.43208GT[30]

Select item 149109367111.

rs1491093671 has merged into rs201623798 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>-,GCGC,GCGCGC,GCGCGCGC,GCGCGCGCGC [Show Flanks]
Chromosome:: 13:40585343 (GRCh38)
13:41159480 (GRCh37)
Canonical SPDI:: NC_000013.11:40585334:GCGCGCGCGC:GCGCGCGC,NC_000013.11:40585334:GCGCGCGCGC:GCGCGCGCGCGC,NC_000013.11:40585334:GCGCGCGCGC:GCGCGCGCGCGCGC,NC_000013.11:40585334:GCGCGCGCGC:GCGCGCGCGCGCGCGC,NC_000013.11:40585334:GCGCGCGCGC:GCGCGCGCGCGCGCGCGC
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCGCGCGCGCGCGC=0./0 (ALFA)
-=0.00046/8 (TOMMO)
-=0.00246/11 (Estonian)
-=0.00531/34 (1000Genomes)
HGVS:: NC_000013.11:g.40585335GC[4], NC_000013.11:g.40585335GC[6], NC_000013.11:g.40585335GC[7], NC_000013.11:g.40585335GC[8], NC_000013.11:g.40585335GC[9], NC_000013.10:g.41159472GC[4], NC_000013.10:g.41159472GC[6], NC_000013.10:g.41159472GC[7], NC_000013.10:g.41159472GC[8], NC_000013.10:g.41159472GC[9], NG_023244.1:g.86254GC[4], NG_023244.1:g.86254GC[6], NG_023244.1:g.86254GC[7], NG_023244.1:g.86254GC[8], NG_023244.1:g.86254GC[9], XM_011535010.3:c.-22737GC[4], XM_011535010.3:c.-22737GC[6], XM_011535010.3:c.-22737GC[7], XM_011535010.3:c.-22737GC[8], XM_011535010.3:c.-22737GC[9]

Select item 149107385012.

rs1491073850 has merged into rs61652588 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 13:40632924 (GRCh38)
13:41207061 (GRCh37)
Canonical SPDI:: NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:40632911:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: FOXO1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.049224/241 (1000Genomes)
HGVS:: NC_000013.11:g.40632924_40632926del, NC_000013.11:g.40632925_40632926del, NC_000013.11:g.40632926del, NC_000013.11:g.40632926dup, NC_000013.11:g.40632925_40632926dup, NC_000013.11:g.40632924_40632926dup, NC_000013.10:g.41207061_41207063del, NC_000013.10:g.41207062_41207063del, NC_000013.10:g.41207063del, NC_000013.10:g.41207063dup, NC_000013.10:g.41207062_41207063dup, NC_000013.10:g.41207061_41207063dup, NG_023244.1:g.38684_38686del, NG_023244.1:g.38685_38686del, NG_023244.1:g.38686del, NG_023244.1:g.38686dup, NG_023244.1:g.38685_38686dup, NG_023244.1:g.38684_38686dup

Select item 149105922213.

rs1491059222 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 13:40612464 (GRCh38)
13:41186601 (GRCh37)
Canonical SPDI:: NC_000013.11:40612463:TT:
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.40612464_40612465del, NC_000013.10:g.41186601_41186602del, NG_023244.1:g.59133_59134del

Select item 149105599314.

rs1491055993 has merged into rs34831498 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAGGGAGGGGGTAGGGGGGGAAAGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAGAGGGAGAGGGAAGGGGGGAGCAGGAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:40587279 (GRCh38)
13:41161416 (GRCh37)
Canonical SPDI:: NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAGGGAGGGGGTAGGGGGGGAAAGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40587266:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAGAGGGAGAGGGAAGGGGGGAGCAGGAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.375/15 (GENOME_DK)
HGVS:: NC_000013.11:g.40587279_40587285del, NC_000013.11:g.40587284_40587285del, NC_000013.11:g.40587285del, NC_000013.11:g.40587285dup, NC_000013.11:g.40587284_40587285dup, NC_000013.11:g.40587283_40587285dup, NC_000013.11:g.40587282_40587285dup, NC_000013.11:g.40587278_40587285dup, NC_000013.11:g.40587275_40587285dup, NC_000013.11:g.40587267_40587285A[21]GGGAGGGGGTAGGGGGGGAAAGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000013.11:g.40587267_40587285A[20]GAGGGA[2]AGGGGGGAGCAGGAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA[1], NC_000013.10:g.41161416_41161422del, NC_000013.10:g.41161421_41161422del, NC_000013.10:g.41161422del, NC_000013.10:g.41161422dup, NC_000013.10:g.41161421_41161422dup, NC_000013.10:g.41161420_41161422dup, NC_000013.10:g.41161419_41161422dup, NC_000013.10:g.41161415_41161422dup, NC_000013.10:g.41161412_41161422dup, NC_000013.10:g.41161404_41161422A[21]GGGAGGGGGTAGGGGGGGAAAGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000013.10:g.41161404_41161422A[20]GAGGGA[2]AGGGGGGAGCAGGAGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA[1], NG_023244.1:g.84325_84331del, NG_023244.1:g.84330_84331del, NG_023244.1:g.84331del, NG_023244.1:g.84331dup, NG_023244.1:g.84330_84331dup, NG_023244.1:g.84329_84331dup, NG_023244.1:g.84328_84331dup, NG_023244.1:g.84324_84331dup, NG_023244.1:g.84321_84331dup, NG_023244.1:g.84313_84331T[32]CTCCTTTCCCCCCCTACCCCCTCCCTTTTTTTTTTTTTTTTTTTTT[1], NG_023244.1:g.84313_84331T[20]CTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCTCCTGCTCCCCCCTTCCCTCTCCCTCTTTTTTTTTTTTTTTTTTTT[1], XM_011535010.3:c.-24666_-24660del, XM_011535010.3:c.-24661_-24660del, XM_011535010.3:c.-24660del, XM_011535010.3:c.-24660dup, XM_011535010.3:c.-24661_-24660dup, XM_011535010.3:c.-24662_-24660dup, XM_011535010.3:c.-24663_-24660dup, XM_011535010.3:c.-24667_-24660dup, XM_011535010.3:c.-24670_-24660dup, XM_011535010.3:c.-24678_-24660T[32]CTCCTTTCCCCCCCTACCCCCTCCCTTTTTTTTTTTTTTTTTTTTT[1], XM_011535010.3:c.-24678_-24660T[20]CTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCTCCTGCTCCCCCCTTCCCTCTCCCTCTTTTTTTTTTTTTTTTTTTT[1]

Select item 149102468415.

rs1491024684 has merged into rs71727126 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,A,AA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 13:40643356 (GRCh38)
13:41217493 (GRCh37)
Canonical SPDI:: NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000013.11:40643347:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FOXO1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000013.11:g.40643356_40643363del, NC_000013.11:g.40643357_40643363del, NC_000013.11:g.40643358_40643363del, NC_000013.11:g.40643362_40643363del, NC_000013.11:g.40643363del, NC_000013.11:g.40643363dup, NC_000013.11:g.40643362_40643363dup, NC_000013.11:g.40643361_40643363dup, NC_000013.11:g.40643359_40643363dup, NC_000013.11:g.40643358_40643363dup, NC_000013.11:g.40643357_40643363dup, NC_000013.11:g.40643356_40643363dup, NC_000013.11:g.40643355_40643363dup, NC_000013.11:g.40643354_40643363dup, NC_000013.11:g.40643363_40643364insAAAAAAAAAAAAAAAAAAAAAA, NC_000013.11:g.40643363_40643364insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000013.10:g.41217493_41217500del, NC_000013.10:g.41217494_41217500del, NC_000013.10:g.41217495_41217500del, NC_000013.10:g.41217499_41217500del, NC_000013.10:g.41217500del, NC_000013.10:g.41217500dup, NC_000013.10:g.41217499_41217500dup, NC_000013.10:g.41217498_41217500dup, NC_000013.10:g.41217496_41217500dup, NC_000013.10:g.41217495_41217500dup, NC_000013.10:g.41217494_41217500dup, NC_000013.10:g.41217493_41217500dup, NC_000013.10:g.41217492_41217500dup, NC_000013.10:g.41217491_41217500dup, NC_000013.10:g.41217500_41217501insAAAAAAAAAAAAAAAAAAAAAA, NC_000013.10:g.41217500_41217501insAAAAAAAAAAAAAAAAAAAAAAAAAA, NG_023244.1:g.28243_28250del, NG_023244.1:g.28244_28250del, NG_023244.1:g.28245_28250del, NG_023244.1:g.28249_28250del, NG_023244.1:g.28250del, NG_023244.1:g.28250dup, NG_023244.1:g.28249_28250dup, NG_023244.1:g.28248_28250dup, NG_023244.1:g.28246_28250dup, NG_023244.1:g.28245_28250dup, NG_023244.1:g.28244_28250dup, NG_023244.1:g.28243_28250dup, NG_023244.1:g.28242_28250dup, NG_023244.1:g.28241_28250dup, NG_023244.1:g.28250_28251insTTTTTTTTTTTTTTTTTTTTTT, NG_023244.1:g.28250_28251insTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149095577916.

rs1490955779 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 13:40567466 (GRCh38)
13:41141603 (GRCh37)
Canonical SPDI:: NC_000013.11:40567465:T:A
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.40567466T>A, NC_000013.10:g.41141603T>A, NG_023244.1:g.104132A>T, XM_011535010.3:c.-4859A>T

Select item 149091441417.

rs1490914414 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:40582315 (GRCh38)
13:41156452 (GRCh37)
Canonical SPDI:: NC_000013.11:40582314:G:A
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.40582315G>A, NC_000013.10:g.41156452G>A, NG_023244.1:g.89283C>T, XM_011535010.3:c.-19708C>T

Select item 149090873218.

rs1490908732 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 13:40638381 (GRCh38)
13:41212518 (GRCh37)
Canonical SPDI:: NC_000013.11:40638380:T:A
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.40638381T>A, NC_000013.10:g.41212518T>A, NG_023244.1:g.33217A>T

Select item 149088042819.

rs1490880428 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:40657318 (GRCh38)
13:41231455 (GRCh37)
Canonical SPDI:: NC_000013.11:40657317:T:C
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/1 (GnomAD)
HGVS:: NC_000013.11:g.40657318T>C, NC_000013.10:g.41231455T>C, NG_023244.1:g.14280A>G

Select item 149083661520.

rs1490836615 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:40655691 (GRCh38)
13:41229828 (GRCh37)
Canonical SPDI:: NC_000013.11:40655690:G:A
Gene:: FOXO1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000032/4 (GnomAD)
HGVS:: NC_000013.11:g.40655691G>A, NC_000013.10:g.41229828G>A, NG_023244.1:g.15907C>T

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