SNP Links for Gene (Select 223) - SNP

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Select item 14915577781.

rs1491557778 has merged into rs56088658 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:165674329 (GRCh38)
1:165643566 (GRCh37)
Canonical SPDI:: NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165674315:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.165674329_165674341del, NC_000001.11:g.165674330_165674341del, NC_000001.11:g.165674331_165674341del, NC_000001.11:g.165674333_165674341del, NC_000001.11:g.165674334_165674341del, NC_000001.11:g.165674335_165674341del, NC_000001.11:g.165674337_165674341del, NC_000001.11:g.165674338_165674341del, NC_000001.11:g.165674339_165674341del, NC_000001.11:g.165674340_165674341del, NC_000001.11:g.165674341del, NC_000001.11:g.165674341dup, NC_000001.11:g.165674340_165674341dup, NC_000001.11:g.165674339_165674341dup, NC_000001.11:g.165674338_165674341dup, NC_000001.11:g.165674334_165674341dup, NC_000001.11:g.165674332_165674341dup, NC_000001.10:g.165643566_165643578del, NC_000001.10:g.165643567_165643578del, NC_000001.10:g.165643568_165643578del, NC_000001.10:g.165643570_165643578del, NC_000001.10:g.165643571_165643578del, NC_000001.10:g.165643572_165643578del, NC_000001.10:g.165643574_165643578del, NC_000001.10:g.165643575_165643578del, NC_000001.10:g.165643576_165643578del, NC_000001.10:g.165643577_165643578del, NC_000001.10:g.165643578del, NC_000001.10:g.165643578dup, NC_000001.10:g.165643577_165643578dup, NC_000001.10:g.165643576_165643578dup, NC_000001.10:g.165643575_165643578dup, NC_000001.10:g.165643571_165643578dup, NC_000001.10:g.165643569_165643578dup, NG_012256.1:g.29336_29348del, NG_012256.1:g.29337_29348del, NG_012256.1:g.29338_29348del, NG_012256.1:g.29340_29348del, NG_012256.1:g.29341_29348del, NG_012256.1:g.29342_29348del, NG_012256.1:g.29344_29348del, NG_012256.1:g.29345_29348del, NG_012256.1:g.29346_29348del, NG_012256.1:g.29347_29348del, NG_012256.1:g.29348del, NG_012256.1:g.29348dup, NG_012256.1:g.29347_29348dup, NG_012256.1:g.29346_29348dup, NG_012256.1:g.29345_29348dup, NG_012256.1:g.29341_29348dup, NG_012256.1:g.29339_29348dup

Select item 14915279502.

rs1491527950 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:165686508 (GRCh38)
1:165655746 (GRCh37)
Canonical SPDI:: NC_000001.11:165686508::A
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.165686508_165686509insA, NC_000001.10:g.165655745_165655746insA, NG_012256.1:g.17155_17156insT

Select item 14915256733.

rs1491525673 [Homo sapiens]

Variant type:: DEL
Alleles:: CG>- [Show Flanks]
Chromosome:: 1:165673014 (GRCh38)
1:165642251 (GRCh37)
Canonical SPDI:: NC_000001.11:165673013:CG:
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.165673014_165673015del, NC_000001.10:g.165642251_165642252del, NG_012256.1:g.30649_30650del

Select item 14914503074.

rs1491450307 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:165677857 (GRCh38)
1:165647094 (GRCh37)
Canonical SPDI:: NC_000001.11:165677856:CA:
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00953/113 (ALFA)
-=0.00007/2 (TOMMO)
-=0.00075/47 (GnomAD)
HGVS:: NC_000001.11:g.165677857_165677858del, NC_000001.10:g.165647094_165647095del, NG_012256.1:g.25806_25807del

Select item 14913502775.

rs1491350277 has merged into rs35531113 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:165677865 (GRCh38)
1:165647102 (GRCh37)
Canonical SPDI:: NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:165677857:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
AAAAAAAAAAAAAAA=0./0 (GENOME_DK)
HGVS:: NC_000001.11:g.165677865_165677879del, NC_000001.11:g.165677871_165677879del, NC_000001.11:g.165677872_165677879del, NC_000001.11:g.165677873_165677879del, NC_000001.11:g.165677874_165677879del, NC_000001.11:g.165677875_165677879del, NC_000001.11:g.165677876_165677879del, NC_000001.11:g.165677877_165677879del, NC_000001.11:g.165677878_165677879del, NC_000001.11:g.165677879del, NC_000001.11:g.165677879dup, NC_000001.11:g.165677878_165677879dup, NC_000001.11:g.165677877_165677879dup, NC_000001.10:g.165647102_165647116del, NC_000001.10:g.165647108_165647116del, NC_000001.10:g.165647109_165647116del, NC_000001.10:g.165647110_165647116del, NC_000001.10:g.165647111_165647116del, NC_000001.10:g.165647112_165647116del, NC_000001.10:g.165647113_165647116del, NC_000001.10:g.165647114_165647116del, NC_000001.10:g.165647115_165647116del, NC_000001.10:g.165647116del, NC_000001.10:g.165647116dup, NC_000001.10:g.165647115_165647116dup, NC_000001.10:g.165647114_165647116dup, NG_012256.1:g.25792_25806del, NG_012256.1:g.25798_25806del, NG_012256.1:g.25799_25806del, NG_012256.1:g.25800_25806del, NG_012256.1:g.25801_25806del, NG_012256.1:g.25802_25806del, NG_012256.1:g.25803_25806del, NG_012256.1:g.25804_25806del, NG_012256.1:g.25805_25806del, NG_012256.1:g.25806del, NG_012256.1:g.25806dup, NG_012256.1:g.25805_25806dup, NG_012256.1:g.25804_25806dup

Select item 14913378186.

rs1491337818 has merged into rs748997343 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT [Show Flanks]
Chromosome:: 1:165686515 (GRCh38)
1:165655752 (GRCh37)
Canonical SPDI:: NC_000001.11:165686507:TTTTTTTTTTT:TTTTTTT,NC_000001.11:165686507:TTTTTTTTTTT:TTTTTTTT,NC_000001.11:165686507:TTTTTTTTTTT:TTTTTTTTT,NC_000001.11:165686507:TTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:165686507:TTTTTTTTTTT:TTTTTTTTTTTT
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000001.11:g.165686515_165686518del, NC_000001.11:g.165686516_165686518del, NC_000001.11:g.165686517_165686518del, NC_000001.11:g.165686518del, NC_000001.11:g.165686518dup, NC_000001.10:g.165655752_165655755del, NC_000001.10:g.165655753_165655755del, NC_000001.10:g.165655754_165655755del, NC_000001.10:g.165655755del, NC_000001.10:g.165655755dup, NG_012256.1:g.17153_17156del, NG_012256.1:g.17154_17156del, NG_012256.1:g.17155_17156del, NG_012256.1:g.17156del, NG_012256.1:g.17156dup

Select item 14912158617.

rs1491215861 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 1:165674315 (GRCh38)
1:165643552 (GRCh37)
Canonical SPDI:: NC_000001.11:165674314:TA:
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00236/28 (ALFA)
-=0.00004/1 (TOMMO)
HGVS:: NC_000001.11:g.165674315_165674316del, NC_000001.10:g.165643552_165643553del, NG_012256.1:g.29348_29349del

Select item 14908926118.

rs1490892611 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:165684310 (GRCh38)
1:165653547 (GRCh37)
Canonical SPDI:: NC_000001.11:165684309:A:C
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.165684310A>C, NC_000001.10:g.165653547A>C, NG_012256.1:g.19354T>G

Select item 14908615709.

rs1490861570 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:165668743 (GRCh38)
1:165637980 (GRCh37)
Canonical SPDI:: NC_000001.11:165668742:A:G
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.165668743A>G, NC_000001.10:g.165637980A>G, NG_012256.1:g.34921T>C

Select item 149082962510.

rs1490829625 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:165686079 (GRCh38)
1:165655316 (GRCh37)
Canonical SPDI:: NC_000001.11:165686078:T:C,NC_000001.11:165686078:T:G
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.165686079T>C, NC_000001.11:g.165686079T>G, NC_000001.10:g.165655316T>C, NC_000001.10:g.165655316T>G, NG_012256.1:g.17585A>G, NG_012256.1:g.17585A>C

Select item 149079963911.

rs1490799639 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GAA,GAAAAGAA [Show Flanks]
Chromosome:: 1:165688023 (GRCh38)
1:165657261 (GRCh37)
Canonical SPDI:: NC_000001.11:165688023:A:AGAA,NC_000001.11:165688023:A:AGAAAAGAA
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: AGA=0.00012/2 (TOMMO)
HGVS:: NC_000001.11:g.165688024_165688025insGAA, NC_000001.11:g.165688024_165688025insGAAAAGAA, NC_000001.10:g.165657261_165657262insGAA, NC_000001.10:g.165657261_165657262insGAAAAGAA, NG_012256.1:g.15640_15641insTCT, NG_012256.1:g.15640_15641insTCTTTTCT

Select item 149069276912.

rs1490692769 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCTC>- [Show Flanks]
Chromosome:: 1:165676596 (GRCh38)
1:165645833 (GRCh37)
Canonical SPDI:: NC_000001.11:165676594:CGCTC:C
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.165676596_165676599del, NC_000001.10:g.165645833_165645836del, NG_012256.1:g.27066_27069del, NG_010535.1:g.425_428del

Select item 149064358413.

rs1490643584 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:165677560 (GRCh38)
1:165646797 (GRCh37)
Canonical SPDI:: NC_000001.11:165677559:A:G
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.165677560A>G, NC_000001.10:g.165646797A>G, NG_012256.1:g.26104T>C

Select item 149061879214.

rs1490618792 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:165692046 (GRCh38)
1:165661283 (GRCh37)
Canonical SPDI:: NC_000001.11:165692045:C:T
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.165692046C>T, NC_000001.10:g.165661283C>T, NG_012256.1:g.11618G>A

Select item 149038914115.

rs1490389141 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:165686052 (GRCh38)
1:165655289 (GRCh37)
Canonical SPDI:: NC_000001.11:165686051:G:A
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.165686052G>A, NC_000001.10:g.165655289G>A, NG_012256.1:g.17612C>T

Select item 149037127716.

rs1490371277 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:165667667 (GRCh38)
1:165636904 (GRCh37)
Canonical SPDI:: NC_000001.11:165667666:T:A,NC_000001.11:165667666:T:C
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.165667667T>A, NC_000001.11:g.165667667T>C, NC_000001.10:g.165636904T>A, NC_000001.10:g.165636904T>C, NG_012256.1:g.35997A>T, NG_012256.1:g.35997A>G

Select item 149036174017.

rs1490361740 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:165699413 (GRCh38)
1:165668650 (GRCh37)
Canonical SPDI:: NC_000001.11:165699412:T:G
Gene:: ALDH9A1 (Varview), LOC440700 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.165699413T>G, NC_000001.10:g.165668650T>G, NG_012256.1:g.4251A>C

Select item 149033487818.

rs1490334878 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:165690438 (GRCh38)
1:165659675 (GRCh37)
Canonical SPDI:: NC_000001.11:165690437:T:A
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.165690438T>A, NC_000001.10:g.165659675T>A, NG_012256.1:g.13226A>T

Select item 149016976919.

rs1490169769 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:165667153 (GRCh38)
1:165636390 (GRCh37)
Canonical SPDI:: NC_000001.11:165667152:G:
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.165667153del, NC_000001.10:g.165636390del, NG_012256.1:g.36511del

Select item 149013135420.

rs1490131354 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:165668889 (GRCh38)
1:165638126 (GRCh37)
Canonical SPDI:: NC_000001.11:165668888:T:G
Gene:: ALDH9A1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.165668889T>G, NC_000001.10:g.165638126T>G, NG_012256.1:g.34775A>C

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