SNP Links for Gene (Select 219429) - SNP

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Select item 14907717851.

rs1490771785 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:55605866 (GRCh38)
11:55373342 (GRCh37)
Canonical SPDI:: NC_000011.10:55605865:T:A,NC_000011.10:55605865:T:C
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.000008/1 (GnomAD)
A=0.000119/2 (TOMMO)
HGVS:: NC_000011.10:g.55605866T>A, NC_000011.10:g.55605866T>C, NC_000011.9:g.55373342T>A, NC_000011.9:g.55373342T>C

Select item 14902388742.

rs1490238874 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:55603423 (GRCh38)
11:55370899 (GRCh37)
Canonical SPDI:: NC_000011.10:55603422:T:A,NC_000011.10:55603422:T:C
Gene:: OR4C11 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55603423T>A, NC_000011.10:g.55603423T>C, NC_000011.9:g.55370899T>A, NC_000011.9:g.55370899T>C, NM_001004700.3:c.*18A>T, NM_001004700.3:c.*18A>G, NM_001004700.2:c.*18A>T, NM_001004700.2:c.*18A>G

Select item 14889970383.

rs1488997038 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55604609 (GRCh38)
11:55372085 (GRCh37)
Canonical SPDI:: NC_000011.10:55604608:C:T
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.55604609C>T, NC_000011.9:g.55372085C>T

Select item 14889724674.

rs1488972467 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55605450 (GRCh38)
11:55372926 (GRCh37)
Canonical SPDI:: NC_000011.10:55605449:G:A
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55605450G>A, NC_000011.9:g.55372926G>A

Select item 14888401345.

rs1488840134 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:55602880 (GRCh38)
11:55370356 (GRCh37)
Canonical SPDI:: NC_000011.10:55602879:C:A,NC_000011.10:55602879:C:T
Gene:: OR4C11 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55602880C>A, NC_000011.10:g.55602880C>T, NC_000011.9:g.55370356C>A, NC_000011.9:g.55370356C>T, NM_001004700.3:c.*561G>T, NM_001004700.3:c.*561G>A

Select item 14886436796.

rs1488643679 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:55605851 (GRCh38)
11:55373327 (GRCh37)
Canonical SPDI:: NC_000011.10:55605850:A:G
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000016/2 (GnomAD)
HGVS:: NC_000011.10:g.55605851A>G, NC_000011.9:g.55373327A>G

Select item 14879929257.

rs1487992925 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:55605132 (GRCh38)
11:55372608 (GRCh37)
Canonical SPDI:: NC_000011.10:55605131:A:T
Gene:: OR4C11 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.55605132A>T, NC_000011.9:g.55372608A>T, NM_001004700.3:c.-51T>A

Select item 14857330138.

rs1485733013 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:55603866 (GRCh38)
11:55371342 (GRCh37)
Canonical SPDI:: NC_000011.10:55603865:A:T
Gene:: OR4C11 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.55603866A>T, NC_000011.9:g.55371342A>T, NM_001004700.3:c.508T>A, NM_001004700.2:c.508T>A, NP_001004700.2:p.Tyr170Asn

Select item 14857019429.

rs1485701942 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:55604710 (GRCh38)
11:55372186 (GRCh37)
Canonical SPDI:: NC_000011.10:55604708:ACA:A
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.00051/6 (ALFA)
HGVS:: NC_000011.10:g.55604710_55604711del, NC_000011.9:g.55372186_55372187del

Select item 148314345310.

rs1483143453 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55604719 (GRCh38)
11:55372195 (GRCh37)
Canonical SPDI:: NC_000011.10:55604718:C:T
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
T=0.000024/3 (GnomAD)
HGVS:: NC_000011.10:g.55604719C>T, NC_000011.9:g.55372195C>T

Select item 148217834911.

rs1482178349 [Homo sapiens]

Variant type:: DEL
Alleles:: CC>- [Show Flanks]
Chromosome:: 11:55603962 (GRCh38)
11:55371438 (GRCh37)
Canonical SPDI:: NC_000011.10:55603961:CC:
Gene:: OR4C11 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000023/3 (GnomAD)
HGVS:: NC_000011.10:g.55603962_55603963del, NC_000011.9:g.55371438_55371439del, NM_001004700.3:c.411_412del, NM_001004700.2:c.411_412del, NP_001004700.2:p.Gln137fs

Select item 148204741712.

rs1482047417 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:55605529 (GRCh38)
11:55373005 (GRCh37)
Canonical SPDI:: NC_000011.10:55605528:G:A,NC_000011.10:55605528:G:C
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/1 (GnomAD)
A=0.000236/1 (Estonian)
HGVS:: NC_000011.10:g.55605529G>A, NC_000011.10:g.55605529G>C, NC_000011.9:g.55373005G>A, NC_000011.9:g.55373005G>C

Select item 148197603213.

rs1481976032 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:55603883 (GRCh38)
11:55371359 (GRCh37)
Canonical SPDI:: NC_000011.10:55603882:A:G
Gene:: OR4C11 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55603883A>G, NC_000011.9:g.55371359A>G, NM_001004700.3:c.491T>C, NM_001004700.2:c.491T>C, NP_001004700.2:p.Leu164Ser

Select item 148133604714.

rs1481336047 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCT>- [Show Flanks]
Chromosome:: 11:55605748 (GRCh38)
11:55373224 (GRCh37)
Canonical SPDI:: NC_000011.10:55605745:CTCCT:CT
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CT=0./0 (ALFA)
-=0.000039/5 (GnomAD)
-=0.000064/17 (TOPMED)
-=0.000277/4 (TOMMO)
-=0.003181/5 (Korea1K)
HGVS:: NC_000011.10:g.55605748_55605750del, NC_000011.9:g.55373224_55373226del

Select item 148089113915.

rs1480891139 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:55605679 (GRCh38)
11:55373155 (GRCh37)
Canonical SPDI:: NC_000011.10:55605678:G:A,NC_000011.10:55605678:G:T
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000047/6 (GnomAD)
HGVS:: NC_000011.10:g.55605679G>A, NC_000011.10:g.55605679G>T, NC_000011.9:g.55373155G>A, NC_000011.9:g.55373155G>T

Select item 147919753116.

rs1479197531 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:55605009 (GRCh38)
11:55372485 (GRCh37)
Canonical SPDI:: NC_000011.10:55605008:G:A,NC_000011.10:55605008:G:C
Gene:: OR4C11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.55605009G>A, NC_000011.10:g.55605009G>C, NC_000011.9:g.55372485G>A, NC_000011.9:g.55372485G>C

Select item 147857240617.

rs1478572406 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:55605219 (GRCh38)
11:55372695 (GRCh37)
Canonical SPDI:: NC_000011.10:55605218:T:C,NC_000011.10:55605218:T:G
Gene:: OR4C11 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
C=0.000023/3 (GnomAD)
HGVS:: NC_000011.10:g.55605219T>C, NC_000011.10:g.55605219T>G, NC_000011.9:g.55372695T>C, NC_000011.9:g.55372695T>G, NM_001004700.3:c.-138A>G, NM_001004700.3:c.-138A>C

Select item 147835729018.

rs1478357290 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55603376 (GRCh38)
11:55370852 (GRCh37)
Canonical SPDI:: NC_000011.10:55603375:G:A
Gene:: OR4C11 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00007/9 (GnomAD)
HGVS:: NC_000011.10:g.55603376G>A, NC_000011.9:g.55370852G>A, NM_001004700.3:c.*65C>T, NM_001004700.2:c.*65C>T

Select item 147774080719.

rs1477740807 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:55604340 (GRCh38)
11:55371816 (GRCh37)
Canonical SPDI:: NC_000011.10:55604339:G:A,NC_000011.10:55604339:G:T
Gene:: OR4C11 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55604340G>A, NC_000011.10:g.55604340G>T, NC_000011.9:g.55371816G>A, NC_000011.9:g.55371816G>T, NM_001004700.3:c.34C>T, NM_001004700.3:c.34C>A, NM_001004700.2:c.34C>T, NM_001004700.2:c.34C>A, NP_001004700.2:p.Leu12Met

Select item 147755631320.

rs1477556313 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:55605206 (GRCh38)
11:55372682 (GRCh37)
Canonical SPDI:: NC_000011.10:55605205:G:T
Gene:: OR4C11 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/1 (GnomAD)
HGVS:: NC_000011.10:g.55605206G>T, NC_000011.9:g.55372682G>T, NM_001004700.3:c.-125C>A

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