Links from Gene
Items: 1 to 20 of 1697
1.
rs1491504433 has merged into rs11285388 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 6:7990799
(GRCh38)
6:7991032
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:7990789:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.339058/1698
(1000Genomes)
TTTTTTTTTT=0.395693/1525
(ALSPAC)
-=0.45/18
(GENOME_DK)
- HGVS:
NC_000006.12:g.7990799_7990811del, NC_000006.12:g.7990800_7990811del, NC_000006.12:g.7990801_7990811del, NC_000006.12:g.7990802_7990811del, NC_000006.12:g.7990803_7990811del, NC_000006.12:g.7990804_7990811del, NC_000006.12:g.7990805_7990811del, NC_000006.12:g.7990807_7990811del, NC_000006.12:g.7990808_7990811del, NC_000006.12:g.7990809_7990811del, NC_000006.12:g.7990810_7990811del, NC_000006.12:g.7990811del, NC_000006.12:g.7990811dup, NC_000006.12:g.7990810_7990811dup, NC_000006.12:g.7990809_7990811dup, NC_000006.12:g.7990808_7990811dup, NC_000006.12:g.7990807_7990811dup, NC_000006.12:g.7990806_7990811dup, NC_000006.12:g.7990805_7990811dup, NC_000006.12:g.7990804_7990811dup, NC_000006.12:g.7990803_7990811dup, NC_000006.12:g.7990802_7990811dup, NC_000006.12:g.7990799_7990811dup, NC_000006.12:g.7990811_7990812insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.7990811_7990812insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.7990811_7990812insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.7991032_7991044del, NC_000006.11:g.7991033_7991044del, NC_000006.11:g.7991034_7991044del, NC_000006.11:g.7991035_7991044del, NC_000006.11:g.7991036_7991044del, NC_000006.11:g.7991037_7991044del, NC_000006.11:g.7991038_7991044del, NC_000006.11:g.7991040_7991044del, NC_000006.11:g.7991041_7991044del, NC_000006.11:g.7991042_7991044del, NC_000006.11:g.7991043_7991044del, NC_000006.11:g.7991044del, NC_000006.11:g.7991044dup, NC_000006.11:g.7991043_7991044dup, NC_000006.11:g.7991042_7991044dup, NC_000006.11:g.7991041_7991044dup, NC_000006.11:g.7991040_7991044dup, NC_000006.11:g.7991039_7991044dup, NC_000006.11:g.7991038_7991044dup, NC_000006.11:g.7991037_7991044dup, NC_000006.11:g.7991036_7991044dup, NC_000006.11:g.7991035_7991044dup, NC_000006.11:g.7991032_7991044dup, NC_000006.11:g.7991044_7991045insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.7991044_7991045insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.7991044_7991045insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
3.
rs1491145208 has merged into rs11295581 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAA>-,A,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 6:7986065
(GRCh38)
6:7986298
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000006.12:7986059:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAA=0./0
(
ALFA)
-=0.000064/17
(TOPMED)
A=0.224641/1125
(1000Genomes)
- HGVS:
NC_000006.12:g.7986065_7986072del, NC_000006.12:g.7986066_7986072del, NC_000006.12:g.7986070_7986072del, NC_000006.12:g.7986071_7986072del, NC_000006.12:g.7986072del, NC_000006.12:g.7986072dup, NC_000006.12:g.7986071_7986072dup, NC_000006.12:g.7986070_7986072dup, NC_000006.12:g.7986065_7986072dup, NC_000006.12:g.7986060_7986072dup, NC_000006.11:g.7986298_7986305del, NC_000006.11:g.7986299_7986305del, NC_000006.11:g.7986303_7986305del, NC_000006.11:g.7986304_7986305del, NC_000006.11:g.7986305del, NC_000006.11:g.7986305dup, NC_000006.11:g.7986304_7986305dup, NC_000006.11:g.7986303_7986305dup, NC_000006.11:g.7986298_7986305dup, NC_000006.11:g.7986293_7986305dup
4.
rs1491061904 has merged into rs35367492 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA,AAAAA
[Show Flanks]
- Chromosome:
- 6:7985729
(GRCh38)
6:7985962
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7985715:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:7985715:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:7985715:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:7985715:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:7985715:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
A=0.2969/1487
(1000Genomes)
- HGVS:
6.
rs1490455386 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 6:7986297
(GRCh38)
6:7986530
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7986296:G:A,NC_000006.12:7986296:G:C
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
7.
rs1490177540 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAT>-
[Show Flanks]
- Chromosome:
- 6:7984612
(GRCh38)
6:7984845
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7984606:ATAATAAT:ATAAT
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATAAT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS:
8.
rs1490129434 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 6:7985678
(GRCh38)
6:7985911
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7985677:C:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
9.
rs1488559584 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 6:7988010
(GRCh38)
6:7988243
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7988009:G:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
10.
rs1487684873 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AGCC
[Show Flanks]
- Chromosome:
- 6:7986744
(GRCh38)
6:7986978
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7986744:CAGCC:CAGCCAGCC
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CAGCCAGCC=0./0
(
ALFA)
CAGC=0.000004/1
(TOPMED)
CAGC=0.000007/1
(GnomAD)
- HGVS:
11.
rs1487431269 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 6:7990497
(GRCh38)
6:7990730
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7990496:C:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- downstream_transcript_variant,intron_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000156/1
(1000Genomes)
- HGVS:
13.
rs1486892672 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 6:7986583
(GRCh38)
6:7986816
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7986582:C:T
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency
- MAF:
T=0.000004/1
(GnomAD_exomes)
- HGVS:
14.
rs1486795806 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 6:7989398
(GRCh38)
6:7989631
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7989397:G:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
15.
rs1486724699 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 6:7990625
(GRCh38)
6:7990858
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7990624:G:C
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- downstream_transcript_variant,intron_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
16.
rs1486095872 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 6:7989865
(GRCh38)
6:7990098
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7989864:A:G
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000015/4
(TOPMED)
- HGVS:
17.
rs1485515993 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 6:7987814
(GRCh38)
6:7988047
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7987813:T:C
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
18.
rs1485444583 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 6:7988855
(GRCh38)
6:7989088
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7988854:G:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
19.
rs1485253766 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 6:7986888
(GRCh38)
6:7987121
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7986887:G:A
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(GnomAD_exomes)
A=0.000014/2
(GnomAD)
- HGVS:
20.
rs1484532256 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 6:7988997
(GRCh38)
6:7989230
(GRCh37)
- Canonical SPDI:
- NC_000006.12:7988996:G:C
- Gene:
- PIP5K1P1 (Varview), BLOC1S5-TXNDC5 (Varview)
- Functional Consequence:
- intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000071/1
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000015/4
(TOPMED)
- HGVS: