SNP Links for Gene (Select 1846) - SNP

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Items: 1 to 20 of 4944

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Select item 14908364651.

rs1490836465 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:29347420 (GRCh38)
8:29204937 (GRCh37)
Canonical SPDI:: NC_000008.11:29347419:A:T
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.29347420A>T, NC_000008.10:g.29204937A>T

Select item 14908083052.

rs1490808305 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:29333621 (GRCh38)
8:29191138 (GRCh37)
Canonical SPDI:: NC_000008.11:29333620:C:T
Gene:: DUSP4 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.29333621C>T, NC_000008.10:g.29191138C>T, NM_001394.7:c.*3405G>A, NM_001394.6:c.*3405G>A, NM_057158.4:c.*3405G>A, NM_057158.3:c.*3405G>A

Select item 14906209103.

rs1490620910 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:29348616 (GRCh38)
8:29206133 (GRCh37)
Canonical SPDI:: NC_000008.11:29348615:G:A,NC_000008.11:29348615:G:C
Gene:: DUSP4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000008.11:g.29348616G>A, NC_000008.11:g.29348616G>C, NC_000008.10:g.29206133G>A, NC_000008.10:g.29206133G>C, NM_057158.4:c.-1371C>T, NM_057158.4:c.-1371C>G, NM_057158.3:c.-1371C>T, NM_057158.3:c.-1371C>G

Select item 14905362984.

rs1490536298 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:29334239 (GRCh38)
8:29191756 (GRCh37)
Canonical SPDI:: NC_000008.11:29334238:C:G,NC_000008.11:29334238:C:T
Gene:: DUSP4 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000008.11:g.29334239C>G, NC_000008.11:g.29334239C>T, NC_000008.10:g.29191756C>G, NC_000008.10:g.29191756C>T, NM_001394.7:c.*2787G>C, NM_001394.7:c.*2787G>A, NM_001394.6:c.*2787G>C, NM_001394.6:c.*2787G>A, NM_057158.4:c.*2787G>C, NM_057158.4:c.*2787G>A, NM_057158.3:c.*2787G>C, NM_057158.3:c.*2787G>A

Select item 14903391525.

rs1490339152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:29351156 (GRCh38)
8:29208673 (GRCh37)
Canonical SPDI:: NC_000008.11:29351155:G:A
Gene:: DUSP4 (Varview), LOC124901924 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000306/5 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000008.11:g.29351156G>A, NC_000008.10:g.29208673G>A, XR_007060876.1:n.183G>A

Select item 14900451476.

rs1490045147 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14898674367.

rs1489867436 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:29340445 (GRCh38)
8:29197962 (GRCh37)
Canonical SPDI:: NC_000008.11:29340444:T:C
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.29340445T>C, NC_000008.10:g.29197962T>C, NG_074321.1:g.334T>C

Select item 14897657348.

rs1489765734 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:29338804 (GRCh38)
8:29196321 (GRCh37)
Canonical SPDI:: NC_000008.11:29338803:T:C
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000008.11:g.29338804T>C, NC_000008.10:g.29196321T>C

Select item 14895848699.

rs1489584869 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:29348608 (GRCh38)
8:29206125 (GRCh37)
Canonical SPDI:: NC_000008.11:29348607:G:A,NC_000008.11:29348607:G:C
Gene:: DUSP4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.29348608G>A, NC_000008.11:g.29348608G>C, NC_000008.10:g.29206125G>A, NC_000008.10:g.29206125G>C, NM_057158.4:c.-1363C>T, NM_057158.4:c.-1363C>G, NM_057158.3:c.-1363C>T, NM_057158.3:c.-1363C>G

Select item 148952777410.

rs1489527774 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:29334934 (GRCh38)
8:29192451 (GRCh37)
Canonical SPDI:: NC_000008.11:29334933:C:T
Gene:: DUSP4 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.29334934C>T, NC_000008.10:g.29192451C>T, NM_001394.7:c.*2092G>A, NM_001394.6:c.*2092G>A, NM_057158.4:c.*2092G>A, NM_057158.3:c.*2092G>A

Select item 148948415311.

rs1489484153 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CC [Show Flanks]
Chromosome:: 8:29343936 (GRCh38)
8:29201454 (GRCh37)
Canonical SPDI:: NC_000008.11:29343936:CC:CCCC
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: CC=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.29343937_29343938dup, NC_000008.10:g.29201454_29201455dup

Select item 148946569212.

rs1489465692 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 8:29335625 (GRCh38)
8:29193142 (GRCh37)
Canonical SPDI:: NC_000008.11:29335624:C:A
Gene:: DUSP4 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.000035/1 (TOMMO)
A=0.001638/3 (Korea1K)
HGVS:: NC_000008.11:g.29335625C>A, NC_000008.10:g.29193142C>A, NM_001394.7:c.*1401G>T, NM_001394.6:c.*1401G>T, NM_057158.4:c.*1401G>T, NM_057158.3:c.*1401G>T

Select item 148942997913.

rs1489429979 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:29334585 (GRCh38)
8:29192102 (GRCh37)
Canonical SPDI:: NC_000008.11:29334584:A:G
Gene:: DUSP4 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.29334585A>G, NC_000008.10:g.29192102A>G, NM_001394.7:c.*2441T>C, NM_001394.6:c.*2441T>C, NM_057158.4:c.*2441T>C, NM_057158.3:c.*2441T>C

Select item 148934865014.

rs1489348650 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:29337084 (GRCh38)
8:29194601 (GRCh37)
Canonical SPDI:: NC_000008.11:29337083:G:A
Gene:: DUSP4 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.29337084G>A, NC_000008.10:g.29194601G>A, NM_001394.7:c.1127C>T, NM_001394.6:c.1127C>T, NM_057158.4:c.854C>T, NM_057158.3:c.854C>T, NP_001385.1:p.Ser376Leu, NP_476499.1:p.Ser285Leu

Select item 148840831415.

rs1488408314 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:29339329 (GRCh38)
8:29196846 (GRCh37)
Canonical SPDI:: NC_000008.11:29339328:G:A,NC_000008.11:29339328:G:C
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.29339329G>A, NC_000008.11:g.29339329G>C, NC_000008.10:g.29196846G>A, NC_000008.10:g.29196846G>C

Select item 148834808516.

rs1488348085 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:29349304 (GRCh38)
8:29206821 (GRCh37)
Canonical SPDI:: NC_000008.11:29349303:T:A
Gene:: DUSP4 (Varview), LOC124901924 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.29349304T>A, NC_000008.10:g.29206821T>A

Select item 148823679317.

rs1488236793 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:29340113 (GRCh38)
8:29197630 (GRCh37)
Canonical SPDI:: NC_000008.11:29340112:G:A
Gene:: DUSP4 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.29340113G>A, NC_000008.10:g.29197630G>A, NG_074321.1:g.2G>A, NM_001394.7:c.564C>T, NM_001394.6:c.564C>T, NM_057158.4:c.291C>T, NM_057158.3:c.291C>T

Select item 148808713618.

rs1488087136 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:29332699 (GRCh38)
8:29190216 (GRCh37)
Canonical SPDI:: NC_000008.11:29332698:C:T
Gene:: DUSP4 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000034/9 (TOPMED)
T=0.000036/5 (GnomAD)
T=0.001667/1 (NorthernSweden)
HGVS:: NC_000008.11:g.29332699C>T, NC_000008.10:g.29190216C>T

Select item 148807862919.

rs1488078629 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:29340363 (GRCh38)
8:29197880 (GRCh37)
Canonical SPDI:: NC_000008.11:29340362:A:G
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000008.11:g.29340363A>G, NC_000008.10:g.29197880A>G, NG_074321.1:g.252A>G

Select item 148772417420.

rs1487724174 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:29339570 (GRCh38)
8:29197087 (GRCh37)
Canonical SPDI:: NC_000008.11:29339569:T:C
Gene:: DUSP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000029/4 (GnomAD)
C=0.000034/9 (TOPMED)
HGVS:: NC_000008.11:g.29339570T>C, NC_000008.10:g.29197087T>C

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