SNP Links for Gene (Select 170626) - SNP

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Links from Gene

Items: 1 to 20 of 1170

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Select item 14908940251.

rs1490894025 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:52869859 (GRCh38)
X:52898890 (GRCh37)
Canonical SPDI:: NC_000023.11:52869858:G:C
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52869859G>C, NW_004070877.1:g.2582974G>C, NC_000023.10:g.52898890G>C

Select item 14908463522.

rs1490846352 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:52868481 (GRCh38)
X:52897512 (GRCh37)
Canonical SPDI:: NC_000023.11:52868480:C:T
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.52868481C>T, NW_004070877.1:g.2581596C>T, NC_000023.10:g.52897512C>T

Select item 14903251253.

rs1490325125 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:52866915 (GRCh38)
X:52895946 (GRCh37)
Canonical SPDI:: NC_000023.11:52866914:A:G
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000038/10 (TOPMED)
G=0.000057/6 (GnomAD)
HGVS:: NC_000023.11:g.52866915A>G, NW_004070877.1:g.2580030A>G, NC_000023.10:g.52895946A>G

Select item 14900744624.

rs1490074462 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:52869210 (GRCh38)
X:52898241 (GRCh37)
Canonical SPDI:: NC_000023.11:52869209:A:T
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.52869210A>T, NW_004070877.1:g.2582325A>T, NC_000023.10:g.52898241A>T

Select item 14900309295.

rs1490030929 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:52868107 (GRCh38)
X:52897138 (GRCh37)
Canonical SPDI:: NC_000023.11:52868106:G:A
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.52868107G>A, NW_004070877.1:g.2581222G>A, NC_000023.10:g.52897138G>A

Select item 14898665476.

rs1489866547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:52867591 (GRCh38)
X:52896622 (GRCh37)
Canonical SPDI:: NC_000023.11:52867590:C:A
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000057/15 (TOPMED)
A=0.000097/10 (GnomAD)
HGVS:: NC_000023.11:g.52867591C>A, NW_004070877.1:g.2580706C>A, NC_000023.10:g.52896622C>A

Select item 14892233357.

rs1489223335 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:52866191 (GRCh38)
X:52895220 (GRCh37)
Canonical SPDI:: NC_000023.11:52866190:A:G
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52866191A>G, NW_004070877.1:g.2579306A>G, NC_000023.10:g.52895220A>G

Select item 14888685168.

rs1488868516 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: X:52865106 (GRCh38)
X:52894136 (GRCh37)
Canonical SPDI:: NC_000023.11:52865106:A:AA
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0.000071/1 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000034/9 (TOPMED)
HGVS:: NC_000023.11:g.52865107dup, NW_004070877.1:g.2578222dup, NC_000023.10:g.52894136dup

Select item 14883811439.

rs1488381143 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:52864909 (GRCh38)
X:52893938 (GRCh37)
Canonical SPDI:: NC_000023.11:52864908:T:C
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.52864909T>C, NW_004070877.1:g.2578024T>C, NC_000023.10:g.52893938T>C

Select item 148835764810.

rs1488357648 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:52866945 (GRCh38)
X:52895976 (GRCh37)
Canonical SPDI:: NC_000023.11:52866944:T:C
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52866945T>C, NW_004070877.1:g.2580060T>C, NC_000023.10:g.52895976T>C

Select item 148723573811.

rs1487235738 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:52864206 (GRCh38)
X:52893235 (GRCh37)
Canonical SPDI:: NC_000023.11:52864205:G:T
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.52864206G>T, NW_004070877.1:g.2577321G>T, NC_000023.10:g.52893235G>T

Select item 148688950112.

rs1486889501 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: X:52862355 (GRCh38)
X:52891385 (GRCh37)
Canonical SPDI:: NC_000023.11:52862355:GGGGG:GGGGGG
Gene:: XAGE3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGGGGG=0./0 (ALFA)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52862360dup, NW_004070877.1:g.2575475dup, NC_000023.10:g.52891389dup

Select item 148643498413.

rs1486434984 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:52863224 (GRCh38)
X:52892253 (GRCh37)
Canonical SPDI:: NC_000023.11:52863223:G:A
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000026/7 (TOPMED)
HGVS:: NC_000023.11:g.52863224G>A, NW_004070877.1:g.2576339G>A, NC_000023.10:g.52892253G>A

Select item 148639618614.

rs1486396186 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:52865143 (GRCh38)
X:52894172 (GRCh37)
Canonical SPDI:: NC_000023.11:52865142:G:A
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52865143G>A, NW_004070877.1:g.2578258G>A, NC_000023.10:g.52894172G>A

Select item 148599998915.

rs1485999989 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:52869390 (GRCh38)
X:52898421 (GRCh37)
Canonical SPDI:: NC_000023.11:52869389:G:A
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000034/9 (TOPMED)
A=0.000038/4 (GnomAD)
HGVS:: NC_000023.11:g.52869390G>A, NW_004070877.1:g.2582505G>A, NC_000023.10:g.52898421G>A

Select item 148598637316.

rs1485986373 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:52868177 (GRCh38)
X:52897208 (GRCh37)
Canonical SPDI:: NC_000023.11:52868176:C:T
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.52868177C>T, NW_004070877.1:g.2581292C>T, NC_000023.10:g.52897208C>T

Select item 148526455317.

rs1485264553 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:52862833 (GRCh38)
X:52891862 (GRCh37)
Canonical SPDI:: NC_000023.11:52862832:T:C
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.52862833T>C, NW_004070877.1:g.2575948T>C, NC_000023.10:g.52891862T>C

Select item 148402075818.

rs1484020758 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:52867065 (GRCh38)
X:52896096 (GRCh37)
Canonical SPDI:: NC_000023.11:52867064:A:G
Gene:: XAGE3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.52867065A>G, NW_004070877.1:g.2580180A>G, NC_000023.10:g.52896096A>G, XM_011530769.3:c.69T>C, XM_011530769.2:c.69T>C, XM_011530769.1:c.69T>C, XM_011530768.3:c.69T>C, XM_011530768.2:c.69T>C, XM_011530768.1:c.69T>C, NM_133179.3:c.69T>C, NM_133179.2:c.69T>C, XM_011530770.2:c.69T>C, XM_011530770.1:c.69T>C, NM_130776.2:c.69T>C, NM_130776.1:c.69T>C

Select item 148289645919.

rs1482896459 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:52864392 (GRCh38)
X:52893421 (GRCh37)
Canonical SPDI:: NC_000023.11:52864391:C:T
Gene:: XAGE3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.52864392C>T, NW_004070877.1:g.2577507C>T, NC_000023.10:g.52893421C>T

Select item 148226780720.

rs1482267807 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:52869534 (GRCh38)
X:52898565 (GRCh37)
Canonical SPDI:: NC_000023.11:52869533:A:G
Gene:: XAGE3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.52869534A>G, NW_004070877.1:g.2582649A>G, NC_000023.10:g.52898565A>G

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