SNP Links for Gene (Select 159125) - SNP

Links from Gene

Items: 1 to 20 of 102

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Select item 13977132421.

rs1397713242 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21401839 (GRCh38)
Y:23563725 (GRCh37)
Canonical SPDI:: NC_000024.10:21401838:G:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21401839G>A, NC_000024.9:g.23563725G>A, NG_004832.1:g.91179G>A

Select item 13798607722.

rs1379860772 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:21401836 (GRCh38)
Y:23563722 (GRCh37)
Canonical SPDI:: NC_000024.10:21401835:C:G
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21401836C>G, NC_000024.9:g.23563722C>G, NG_004832.1:g.91176C>G

Select item 13252937113.

rs1325293711 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: Y:21402646 (GRCh38)
Y:23564533 (GRCh37)
Canonical SPDI:: NC_000024.10:21402646:AAAAAA:AAAAAAA
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21402652dup, NC_000024.9:g.23564538dup, NG_004832.1:g.91992dup

Select item 13120271144.

rs1312027114 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: Y:21401807 (GRCh38)
Y:23563693 (GRCh37)
Canonical SPDI:: NC_000024.10:21401806:G:C
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21401807G>C, NC_000024.9:g.23563693G>C, NG_004832.1:g.91147G>C

Select item 12929003595.

rs1292900359 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21401840 (GRCh38)
Y:23563726 (GRCh37)
Canonical SPDI:: NC_000024.10:21401839:G:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21401840G>A, NC_000024.9:g.23563726G>A, NG_004832.1:g.91180G>A

Select item 12762874996.

rs1276287499 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21403278 (GRCh38)
Y:23565164 (GRCh37)
Canonical SPDI:: NC_000024.10:21403277:G:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21403278G>A, NC_000024.9:g.23565164G>A, NG_004832.1:g.92618G>A

Select item 12286888187.

rs1228688818 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:21403245 (GRCh38)
Y:23565131 (GRCh37)
Canonical SPDI:: NC_000024.10:21403244:T:C
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21403245T>C, NC_000024.9:g.23565131T>C, NG_004832.1:g.92585T>C

Select item 11670542248.

rs1167054224 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: Y:21394949 (GRCh38)
Y:23556835 (GRCh37)
Canonical SPDI:: NC_000024.10:21394948:A:G
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
HGVS:: NC_000024.10:g.21394949A>G, NC_000024.9:g.23556835A>G, NG_004832.1:g.84289A>G

Select item 10465327169.

rs1046532716 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: Y:21396371 (GRCh38)
Y:23558257 (GRCh37)
Canonical SPDI:: NC_000024.10:21396370:C:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.5/1 (Siberian)
HGVS:: NC_000024.10:g.21396371C>A, NC_000024.9:g.23558257C>A, NG_004832.1:g.85711C>A

Select item 99010538910.

rs990105389 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: Y:21395529 (GRCh38)
Y:23557415 (GRCh37)
Canonical SPDI:: NC_000024.10:21395528:G:T
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.5/1 (Siberian)
HGVS:: NC_000024.10:g.21395529G>T, NC_000024.9:g.23557415G>T, NG_004832.1:g.84869G>T

Select item 94802764711.

rs948027647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: Y:21396175 (GRCh38)
Y:23558061 (GRCh37)
Canonical SPDI:: NC_000024.10:21396174:C:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.5/1 (Siberian)
HGVS:: NC_000024.10:g.21396175C>A, NC_000024.9:g.23558061C>A, NG_004832.1:g.85515C>A

Select item 91658976912.

rs916589769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: Y:21395957 (GRCh38)
Y:23557843 (GRCh37)
Canonical SPDI:: NC_000024.10:21395956:G:T
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: G=0.5/1 (Siberian)
HGVS:: NC_000024.10:g.21395957G>T, NC_000024.9:g.23557843G>T, NG_004832.1:g.85297G>T, NR_001574.2:n.215C>A

Select item 87909998513.

rs879099985 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21401454 (GRCh38)
Y:23563340 (GRCh37)
Canonical SPDI:: NC_000024.10:21401453:G:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21401454G>A, NC_000024.9:g.23563340G>A, NG_004832.1:g.90794G>A

Select item 87904405914.

rs879044059 has merged into rs748142060 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: Y:21395797 (GRCh38)
Y:23557683 (GRCh37)
Canonical SPDI:: NC_000024.10:21395796:AAAAAAAAAA:AAAAAAAAA,NC_000024.10:21395796:AAAAAAAAAA:AAAAAAAAAAA
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.0032/4 (1000Genomes)
HGVS:: NC_000024.10:g.21395806del, NC_000024.10:g.21395806dup, NC_000024.9:g.23557692del, NC_000024.9:g.23557692dup, NG_004832.1:g.85146del, NG_004832.1:g.85146dup

Select item 87897176315.

rs878971763 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21401471 (GRCh38)
Y:23563357 (GRCh37)
Canonical SPDI:: NC_000024.10:21401470:G:A
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21401471G>A, NC_000024.9:g.23563357G>A, NG_004832.1:g.90811G>A

Select item 87891753816.

rs878917538 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: Y:21401428 (GRCh38)
Y:23563314 (GRCh37)
Canonical SPDI:: NC_000024.10:21401427:A:G
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21401428A>G, NC_000024.9:g.23563314A>G, NG_004832.1:g.90768A>G

Select item 87886287117.

rs878862871 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:21401500 (GRCh38)
Y:23563386 (GRCh37)
Canonical SPDI:: NC_000024.10:21401499:T:C
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000024.10:g.21401500T>C, NC_000024.9:g.23563386T>C, NG_004832.1:g.90840T>C, NR_001574.2:n.63A>G

Select item 86927971218.

rs869279712 [Homo sapiens]

Variant type:: DELINS
Alleles:: GATA>- [Show Flanks]
Chromosome:: Y:21395417 (GRCh38)
Y:23557303 (GRCh37)
Canonical SPDI:: NC_000024.10:21395412:GATAGATA:GATA
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21395413GATA[1], NC_000024.9:g.23557299GATA[1], NG_004832.1:g.84753GATA[1]

Select item 86835725719.

rs868357257 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:21401461 (GRCh38)
Y:23563347 (GRCh37)
Canonical SPDI:: NC_000024.10:21401460:C:T
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.02/1 (Qatari)
HGVS:: NC_000024.10:g.21401461C>T, NC_000024.9:g.23563347C>T, NG_004832.1:g.90801C>T

Select item 78074695520.

rs780746955 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: Y:21397821 (GRCh38)
Y:23559707 (GRCh37)
Canonical SPDI:: NC_000024.10:21397820:A:C
Gene:: RBMY2EP (Varview), PRORY (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.0013/2 (1000Genomes)
HGVS:: NC_000024.10:g.21397821A>C, NC_000024.9:g.23559707A>C, NG_004832.1:g.87161A>C

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