Links from Gene
Items: 1 to 20 of 2994
1.
rs1491582328 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 19:40848940
(GRCh38)
19:41354845
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848939:TA:
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00051/6
(
ALFA)
-=0.00002/1
(GnomAD)
- HGVS:
2.
rs1491511682 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G,GAG,GAGAG,GAGAGAG,GAGAGG,GAGG,GG,GGG
[Show Flanks]
- Chromosome:
- 19:40848977
(GRCh38)
19:41354883
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848977::G,NC_000019.10:40848977::GAG,NC_000019.10:40848977::GAGAG,NC_000019.10:40848977::GAGAGAG,NC_000019.10:40848977::GAGAGG,NC_000019.10:40848977::GAGG,NC_000019.10:40848977::GG,NC_000019.10:40848977::GGG
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAG=0./0
(
ALFA)
GAGAGG=0.00006/1
(TOMMO)
- HGVS:
NC_000019.10:g.40848977_40848978insG, NC_000019.10:g.40848977_40848978insGAG, NC_000019.10:g.40848977_40848978insGAGAG, NC_000019.10:g.40848977_40848978insGAGAGAG, NC_000019.10:g.40848977_40848978insGAGAGG, NC_000019.10:g.40848977_40848978insGAGG, NC_000019.10:g.40848977_40848978insGG, NC_000019.10:g.40848977_40848978insGGG, NC_000019.9:g.41354882_41354883insG, NC_000019.9:g.41354882_41354883insGAG, NC_000019.9:g.41354882_41354883insGAGAG, NC_000019.9:g.41354882_41354883insGAGAGAG, NC_000019.9:g.41354882_41354883insGAGAGG, NC_000019.9:g.41354882_41354883insGAGG, NC_000019.9:g.41354882_41354883insGG, NC_000019.9:g.41354882_41354883insGGG, NG_008377.1:g.6470_6471insC, NG_008377.1:g.6470_6471insCTC, NG_008377.1:g.6470_6471insCTCTC, NG_008377.1:g.6470_6471insCTCTCTC, NG_008377.1:g.6470_6471insCCTCTC, NG_008377.1:g.6470_6471insCCTC, NG_008377.1:g.6470_6471insCC, NG_008377.1:g.6470_6471insCCC
3.
rs1491372166 has merged into rs67032351 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAGAGAGAGAGAGAGAGAGA>-,GA,GAGA,GAGAGA,GAGAGAGA,GAGAGAGAGA,GAGAGAGAGAGA,GAGAGAGAGAGAGA,GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
[Show Flanks]
- Chromosome:
- 19:40848958
(GRCh38)
19:41354863
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40848940:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGAGAGAGAGAGAGA=0./0
(
ALFA)
AGAG=0.3263/1634
(1000Genomes)
- HGVS:
NC_000019.10:g.40848942GA[8], NC_000019.10:g.40848942GA[9], NC_000019.10:g.40848942GA[10], NC_000019.10:g.40848942GA[11], NC_000019.10:g.40848942GA[12], NC_000019.10:g.40848942GA[13], NC_000019.10:g.40848942GA[14], NC_000019.10:g.40848942GA[15], NC_000019.10:g.40848942GA[16], NC_000019.10:g.40848942GA[17], NC_000019.10:g.40848942GA[19], NC_000019.10:g.40848942GA[20], NC_000019.10:g.40848942GA[21], NC_000019.10:g.40848942GA[22], NC_000019.10:g.40848942GA[23], NC_000019.10:g.40848942GA[24], NC_000019.10:g.40848942GA[25], NC_000019.10:g.40848942GA[26], NC_000019.10:g.40848942GA[27], NC_000019.9:g.41354847GA[8], NC_000019.9:g.41354847GA[9], NC_000019.9:g.41354847GA[10], NC_000019.9:g.41354847GA[11], NC_000019.9:g.41354847GA[12], NC_000019.9:g.41354847GA[13], NC_000019.9:g.41354847GA[14], NC_000019.9:g.41354847GA[15], NC_000019.9:g.41354847GA[16], NC_000019.9:g.41354847GA[17], NC_000019.9:g.41354847GA[19], NC_000019.9:g.41354847GA[20], NC_000019.9:g.41354847GA[21], NC_000019.9:g.41354847GA[22], NC_000019.9:g.41354847GA[23], NC_000019.9:g.41354847GA[24], NC_000019.9:g.41354847GA[25], NC_000019.9:g.41354847GA[26], NC_000019.9:g.41354847GA[27], NG_008377.1:g.6472CT[8], NG_008377.1:g.6472CT[9], NG_008377.1:g.6472CT[10], NG_008377.1:g.6472CT[11], NG_008377.1:g.6472CT[12], NG_008377.1:g.6472CT[13], NG_008377.1:g.6472CT[14], NG_008377.1:g.6472CT[15], NG_008377.1:g.6472CT[16], NG_008377.1:g.6472CT[17], NG_008377.1:g.6472CT[19], NG_008377.1:g.6472CT[20], NG_008377.1:g.6472CT[21], NG_008377.1:g.6472CT[22], NG_008377.1:g.6472CT[23], NG_008377.1:g.6472CT[24], NG_008377.1:g.6472CT[25], NG_008377.1:g.6472CT[26], NG_008377.1:g.6472CT[27]
4.
rs1491295586 has merged into rs1440289322 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AGAG>-,AG
[Show Flanks]
- Chromosome:
- 19:40849018
(GRCh38)
19:41354923
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40849011:AGAGAGAGAG:AGAGAG,NC_000019.10:40849011:AGAGAGAGAG:AGAGAGAG
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGAG=0./0
(
ALFA)
-=0.00002/1
(GnomAD)
- HGVS:
5.
rs1491284996 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GAGAGAGAG
[Show Flanks]
- Chromosome:
- 19:40849012
(GRCh38)
19:41354918
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40849012:GAGAGAGAGGAGAGAGAG:GAGAGAGAGGAGAGAGAGGAGAGAGAG
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
GAGAGAGAGGAGAGAGAGGAGAGAGAG=0.00008/1
(
ALFA)
- HGVS:
6.
rs1491120306 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 19:40848977
(GRCh38)
19:41354882
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848976:AA:
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.00172/143
(GnomAD)
- HGVS:
7.
rs1490857650 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 19:40846973
(GRCh38)
19:41352878
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40846972:C:T
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- missense_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
8.
rs1490614116 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,T
[Show Flanks]
- Chromosome:
- 19:40852295
(GRCh38)
19:41358200
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40852294:A:C,NC_000019.10:40852294:A:T
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
9.
rs1489667679 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 19:40843411
(GRCh38)
19:41349316
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40843410:C:A,NC_000019.10:40843410:C:T
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.000014/2
(GnomAD)
A=0.000019/5
(TOPMED)
- HGVS:
10.
rs1489525313 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 19:40852427
(GRCh38)
19:41358332
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40852426:C:T
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000169/2
(
ALFA)
T=0.000114/16
(GnomAD)
T=0.000781/5
(1000Genomes)
- HGVS:
11.
rs1489506736 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 19:40845490
(GRCh38)
19:41351395
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40845489:G:C
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(GnomAD_exomes)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
12.
rs1489433424 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 19:40851683
(GRCh38)
19:41357588
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40851682:G:A
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000011/3
(TOPMED)
- HGVS:
13.
rs1489178779 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 19:40848987
(GRCh38)
19:41354892
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848986:G:A,NC_000019.10:40848986:G:C
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.00481/57
(
ALFA)
A=0.00079/16
(TOMMO)
A=0.00368/309
(GnomAD)
A=0.00499/14
(KOREAN)
G=0.5/1
(SGDP_PRJ)
- HGVS:
14.
rs1489139994 has merged into rs1164660108 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA>-,GAGA,GAGAGA,GAGAGAGAGAGAGA,GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
[Show Flanks]
- Chromosome:
- 19:40849058
(GRCh38)
19:41354963
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000019.10:40849045:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAGAGAGAGAGAGAGAGAGAGAGAGA=0./0
(
ALFA)
- HGVS:
NC_000019.10:g.40849046GA[6], NC_000019.10:g.40849046GA[8], NC_000019.10:g.40849046GA[9], NC_000019.10:g.40849046GA[13], NC_000019.10:g.40849046GA[14], NC_000019.10:g.40849046GA[15], NC_000019.10:g.40849046GA[16], NC_000019.10:g.40849046GA[17], NC_000019.10:g.40849046GA[18], NC_000019.10:g.40849046GA[19], NC_000019.10:g.40849046GA[20], NC_000019.10:g.40849046GA[21], NC_000019.10:g.40849046GA[23], NC_000019.10:g.40849046GA[24], NC_000019.10:g.40849046GA[25], NC_000019.10:g.40849046GA[26], NC_000019.10:g.40849046GA[27], NC_000019.10:g.40849046GA[30], NC_000019.10:g.40849046GA[31], NC_000019.10:g.40849046GA[32], NC_000019.9:g.41354951GA[6], NC_000019.9:g.41354951GA[8], NC_000019.9:g.41354951GA[9], NC_000019.9:g.41354951GA[13], NC_000019.9:g.41354951GA[14], NC_000019.9:g.41354951GA[15], NC_000019.9:g.41354951GA[16], NC_000019.9:g.41354951GA[17], NC_000019.9:g.41354951GA[18], NC_000019.9:g.41354951GA[19], NC_000019.9:g.41354951GA[20], NC_000019.9:g.41354951GA[21], NC_000019.9:g.41354951GA[23], NC_000019.9:g.41354951GA[24], NC_000019.9:g.41354951GA[25], NC_000019.9:g.41354951GA[26], NC_000019.9:g.41354951GA[27], NC_000019.9:g.41354951GA[30], NC_000019.9:g.41354951GA[31], NC_000019.9:g.41354951GA[32], NG_008377.1:g.6359TC[6], NG_008377.1:g.6359TC[8], NG_008377.1:g.6359TC[9], NG_008377.1:g.6359TC[13], NG_008377.1:g.6359TC[14], NG_008377.1:g.6359TC[15], NG_008377.1:g.6359TC[16], NG_008377.1:g.6359TC[17], NG_008377.1:g.6359TC[18], NG_008377.1:g.6359TC[19], NG_008377.1:g.6359TC[20], NG_008377.1:g.6359TC[21], NG_008377.1:g.6359TC[23], NG_008377.1:g.6359TC[24], NG_008377.1:g.6359TC[25], NG_008377.1:g.6359TC[26], NG_008377.1:g.6359TC[27], NG_008377.1:g.6359TC[30], NG_008377.1:g.6359TC[31], NG_008377.1:g.6359TC[32]
15.
rs1488959980 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 19:40845314
(GRCh38)
19:41351219
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40845313:G:A
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- missense_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(GnomAD_exomes)
A=0.000011/3
(TOPMED)
- HGVS:
16.
rs1488808758 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 19:40848980
(GRCh38)
19:41354885
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848979:A:G
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.005817/69
(
ALFA)
G=0.003057/321
(GnomAD)
- HGVS:
18.
rs1487898412 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 19:40846001
(GRCh38)
19:41351906
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40846000:G:A
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- synonymous_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
19.
rs1487835183 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 19:40848422
(GRCh38)
19:41354327
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40848421:T:C
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
C=0.000029/4
(GnomAD)
- HGVS:
20.
rs1487624047 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 19:40847006
(GRCh38)
19:41352911
(GRCh37)
- Canonical SPDI:
- NC_000019.10:40847005:G:C
- Gene:
- CYP2A6 (Varview)
- Functional Consequence:
- missense_variant,coding_sequence_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS: