SNP Links for Gene (Select 151484) - SNP

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Links from Gene

Items: 1 to 20 of 4615

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Select item 14908350141.

rs1490835014 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:230889241 (GRCh38)
2:231753956 (GRCh37)
Canonical SPDI:: NC_000002.12:230889240:A:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.230889241A>G, NC_000002.11:g.231753956A>G

Select item 14908178962.

rs1490817896 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:230890206 (GRCh38)
2:231754921 (GRCh37)
Canonical SPDI:: NC_000002.12:230890205:C:T
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000002.12:g.230890206C>T, NC_000002.11:g.231754921C>T

Select item 14906826433.

rs1490682643 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:230904591 (GRCh38)
2:231769306 (GRCh37)
Canonical SPDI:: NC_000002.12:230904590:C:T
Gene:: GCSIR (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.230904591C>T, NC_000002.11:g.231769306C>T

Select item 14905674194.

rs1490567419 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 2:230900751 (GRCh38)
2:231765466 (GRCh37)
Canonical SPDI:: NC_000002.12:230900750:G:A,NC_000002.12:230900750:G:T
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.230900751G>A, NC_000002.12:g.230900751G>T, NC_000002.11:g.231765466G>A, NC_000002.11:g.231765466G>T

Select item 14904513035.

rs1490451303 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:230897352 (GRCh38)
2:231762067 (GRCh37)
Canonical SPDI:: NC_000002.12:230897351:G:A
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.230897352G>A, NC_000002.11:g.231762067G>A

Select item 14898888916.

rs1489888891 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:230903233 (GRCh38)
2:231767948 (GRCh37)
Canonical SPDI:: NC_000002.12:230903232:A:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.00003/8 (TOPMED)
HGVS:: NC_000002.12:g.230903233A>G, NC_000002.11:g.231767948A>G

Select item 14898632557.

rs1489863255 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:230904155 (GRCh38)
2:231768870 (GRCh37)
Canonical SPDI:: NC_000002.12:230904154:T:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.230904155T>G, NC_000002.11:g.231768870T>G

Select item 14897848888.

rs1489784888 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:230897920 (GRCh38)
2:231762635 (GRCh37)
Canonical SPDI:: NC_000002.12:230897919:A:T
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.230897920A>T, NC_000002.11:g.231762635A>T

Select item 14897320289.

rs1489732028 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:230898892 (GRCh38)
2:231763607 (GRCh37)
Canonical SPDI:: NC_000002.12:230898891:A:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.230898892A>G, NC_000002.11:g.231763607A>G

Select item 148959503710.

rs1489595037 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:230901452 (GRCh38)
2:231766167 (GRCh37)
Canonical SPDI:: NC_000002.12:230901451:T:C
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.230901452T>C, NC_000002.11:g.231766167T>C

Select item 148933293911.

rs1489332939 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 2:230902433 (GRCh38)
2:231767149 (GRCh37)
Canonical SPDI:: NC_000002.12:230902433:A:AA
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.230902434dup, NC_000002.11:g.231767149dup

Select item 148864308012.

rs1488643080 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:230900216 (GRCh38)
2:231764931 (GRCh37)
Canonical SPDI:: NC_000002.12:230900215:C:A
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.230900216C>A, NC_000002.11:g.231764931C>A

Select item 148844901513.

rs1488449015 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:230893889 (GRCh38)
2:231758604 (GRCh37)
Canonical SPDI:: NC_000002.12:230893888:G:A
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.230893889G>A, NC_000002.11:g.231758604G>A

Select item 148829630614.

rs1488296306 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:230903790 (GRCh38)
2:231768505 (GRCh37)
Canonical SPDI:: NC_000002.12:230903789:A:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.230903790A>G, NC_000002.11:g.231768505A>G

Select item 148806990415.

rs1488069904 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:230898935 (GRCh38)
2:231763650 (GRCh37)
Canonical SPDI:: NC_000002.12:230898934:T:C
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000546/1 (Korea1K)
HGVS:: NC_000002.12:g.230898935T>C, NC_000002.11:g.231763650T>C

Select item 148803597116.

rs1488035971 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:230896580 (GRCh38)
2:231761295 (GRCh37)
Canonical SPDI:: NC_000002.12:230896579:G:A
Gene:: GCSIR (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.230896580G>A, NC_000002.11:g.231761295G>A, NR_038238.1:n.1254G>A

Select item 148772578017.

rs1487725780 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 2:230885726 (GRCh38)
2:231750441 (GRCh37)
Canonical SPDI:: NC_000002.12:230885725:T:C,NC_000002.12:230885725:T:G
Gene:: GCSIR (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.230885726T>C, NC_000002.12:g.230885726T>G, NC_000002.11:g.231750441T>C, NC_000002.11:g.231750441T>G

Select item 148732100118.

rs1487321001 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:230893893 (GRCh38)
2:231758608 (GRCh37)
Canonical SPDI:: NC_000002.12:230893892:C:G
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.230893893C>G, NC_000002.11:g.231758608C>G

Select item 148666952119.

rs1486669521 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:230893192 (GRCh38)
2:231757907 (GRCh37)
Canonical SPDI:: NC_000002.12:230893191:C:T
Gene:: GCSIR (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.230893192C>T, NC_000002.11:g.231757907C>T

Select item 148649367920.

rs1486493679 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:230896980 (GRCh38)
2:231761695 (GRCh37)
Canonical SPDI:: NC_000002.12:230896979:T:C
Gene:: GCSIR (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.230896980T>C, NC_000002.11:g.231761695T>C, NR_038238.1:n.1654T>C