SNP Links for Gene (Select 146167) - SNP

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Select item 14914415151.

rs1491441515 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 16:84028045 (GRCh38)
16:84061650 (GRCh37)
Canonical SPDI:: NC_000016.10:84028044:AT:
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000016.10:g.84028045_84028046del, NC_000016.9:g.84061650_84061651del, NG_034136.1:g.19112_19113del

Select item 14913985492.

rs1491398549 has merged into rs1221293803 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 16:84013437 (GRCh38)
16:84047042 (GRCh37)
Canonical SPDI:: NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84013424:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000016.10:g.84013437_84013449del, NC_000016.10:g.84013438_84013449del, NC_000016.10:g.84013439_84013449del, NC_000016.10:g.84013440_84013449del, NC_000016.10:g.84013441_84013449del, NC_000016.10:g.84013443_84013449del, NC_000016.10:g.84013444_84013449del, NC_000016.10:g.84013445_84013449del, NC_000016.10:g.84013446_84013449del, NC_000016.10:g.84013447_84013449del, NC_000016.10:g.84013448_84013449del, NC_000016.10:g.84013449del, NC_000016.10:g.84013449dup, NC_000016.10:g.84013448_84013449dup, NC_000016.10:g.84013447_84013449dup, NC_000016.10:g.84013446_84013449dup, NC_000016.10:g.84013445_84013449dup, NC_000016.10:g.84013444_84013449dup, NC_000016.10:g.84013443_84013449dup, NC_000016.10:g.84013442_84013449dup, NC_000016.10:g.84013441_84013449dup, NC_000016.10:g.84013440_84013449dup, NC_000016.10:g.84013439_84013449dup, NC_000016.10:g.84013437_84013449dup, NC_000016.10:g.84013435_84013449dup, NC_000016.10:g.84013449_84013450insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.9:g.84047042_84047054del, NC_000016.9:g.84047043_84047054del, NC_000016.9:g.84047044_84047054del, NC_000016.9:g.84047045_84047054del, NC_000016.9:g.84047046_84047054del, NC_000016.9:g.84047048_84047054del, NC_000016.9:g.84047049_84047054del, NC_000016.9:g.84047050_84047054del, NC_000016.9:g.84047051_84047054del, NC_000016.9:g.84047052_84047054del, NC_000016.9:g.84047053_84047054del, NC_000016.9:g.84047054del, NC_000016.9:g.84047054dup, NC_000016.9:g.84047053_84047054dup, NC_000016.9:g.84047052_84047054dup, NC_000016.9:g.84047051_84047054dup, NC_000016.9:g.84047050_84047054dup, NC_000016.9:g.84047049_84047054dup, NC_000016.9:g.84047048_84047054dup, NC_000016.9:g.84047047_84047054dup, NC_000016.9:g.84047046_84047054dup, NC_000016.9:g.84047045_84047054dup, NC_000016.9:g.84047044_84047054dup, NC_000016.9:g.84047042_84047054dup, NC_000016.9:g.84047040_84047054dup, NC_000016.9:g.84047054_84047055insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_034136.1:g.33721_33733del, NG_034136.1:g.33722_33733del, NG_034136.1:g.33723_33733del, NG_034136.1:g.33724_33733del, NG_034136.1:g.33725_33733del, NG_034136.1:g.33727_33733del, NG_034136.1:g.33728_33733del, NG_034136.1:g.33729_33733del, NG_034136.1:g.33730_33733del, NG_034136.1:g.33731_33733del, NG_034136.1:g.33732_33733del, NG_034136.1:g.33733del, NG_034136.1:g.33733dup, NG_034136.1:g.33732_33733dup, NG_034136.1:g.33731_33733dup, NG_034136.1:g.33730_33733dup, NG_034136.1:g.33729_33733dup, NG_034136.1:g.33728_33733dup, NG_034136.1:g.33727_33733dup, NG_034136.1:g.33726_33733dup, NG_034136.1:g.33725_33733dup, NG_034136.1:g.33724_33733dup, NG_034136.1:g.33723_33733dup, NG_034136.1:g.33721_33733dup, NG_034136.1:g.33719_33733dup, NG_034136.1:g.33733_33734insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Select item 14912517623.

rs1491251762 has merged into rs1555556895 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGA,GAGAGA [Show Flanks]
Chromosome:: 16:84037775 (GRCh38)
16:84071380 (GRCh37)
Canonical SPDI:: NC_000016.10:84037771:AGAGA:AGA,NC_000016.10:84037771:AGAGA:AGAGAGA,NC_000016.10:84037771:AGAGA:AGAGAGAGA
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGAGA=0./0 (ALFA)
AG=0.00546/10 (Korea1K)
AG=0.01055/177 (TOMMO)
HGVS:: NC_000016.10:g.84037773GA[1], NC_000016.10:g.84037773GA[3], NC_000016.10:g.84037773GA[4], NC_000016.9:g.84071378GA[1], NC_000016.9:g.84071378GA[3], NC_000016.9:g.84071378GA[4], NG_034136.1:g.9383CT[1], NG_034136.1:g.9383CT[3], NG_034136.1:g.9383CT[4]

Select item 14912259604.

rs1491225960 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CG,GG,TG [Show Flanks]
Chromosome:: 16:84037772 (GRCh38)
16:84071378 (GRCh37)
Canonical SPDI:: NC_000016.10:84037772:G:GCG,NC_000016.10:84037772:G:GGG,NC_000016.10:84037772:G:GTG
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000016.10:g.84037773_84037774insCG, NC_000016.10:g.84037773_84037774insGG, NC_000016.10:g.84037773_84037774insTG, NC_000016.9:g.84071378_84071379insCG, NC_000016.9:g.84071378_84071379insGG, NC_000016.9:g.84071378_84071379insTG, NG_034136.1:g.9385_9386insGC, NG_034136.1:g.9385_9386insCC, NG_034136.1:g.9385_9386insAC

Select item 14912120715.

rs1491212071 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 16:84018250 (GRCh38)
16:84051855 (GRCh37)
Canonical SPDI:: NC_000016.10:84018249:TG:
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.001096/13 (ALFA)
-=0.000065/8 (GnomAD)
HGVS:: NC_000016.10:g.84018250_84018251del, NC_000016.9:g.84051855_84051856del, NG_034136.1:g.28907_28908del

Select item 14911028126.

rs1491102812 [Homo sapiens]

Variant type:: INS
Alleles:: ->G,GG,GTG [Show Flanks]
Chromosome:: 16:84013425 (GRCh38)
16:84047031 (GRCh37)
Canonical SPDI:: NC_000016.10:84013425::G,NC_000016.10:84013425::GG,NC_000016.10:84013425::GTG
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
G=0.00049/11 (TOMMO)
G=0.00143/55 (GnomAD)
HGVS:: NC_000016.10:g.84013425_84013426insG, NC_000016.10:g.84013425_84013426insGG, NC_000016.10:g.84013425_84013426insGTG, NC_000016.9:g.84047030_84047031insG, NC_000016.9:g.84047030_84047031insGG, NC_000016.9:g.84047030_84047031insGTG, NG_034136.1:g.33732_33733insC, NG_034136.1:g.33732_33733insCC, NG_034136.1:g.33732_33733insCAC

Select item 14910509587.

rs1491050958 has merged into rs376247461 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTT>-,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 16:84037817 (GRCh38)
16:84071422 (GRCh37)
Canonical SPDI:: NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:84037806:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.84037817_84037825del, NC_000016.10:g.84037819_84037825del, NC_000016.10:g.84037821_84037825del, NC_000016.10:g.84037822_84037825del, NC_000016.10:g.84037823_84037825del, NC_000016.10:g.84037824_84037825del, NC_000016.10:g.84037825del, NC_000016.10:g.84037825dup, NC_000016.10:g.84037824_84037825dup, NC_000016.10:g.84037823_84037825dup, NC_000016.10:g.84037822_84037825dup, NC_000016.10:g.84037821_84037825dup, NC_000016.10:g.84037820_84037825dup, NC_000016.10:g.84037819_84037825dup, NC_000016.10:g.84037818_84037825dup, NC_000016.10:g.84037817_84037825dup, NC_000016.10:g.84037816_84037825dup, NC_000016.10:g.84037815_84037825dup, NC_000016.10:g.84037814_84037825dup, NC_000016.10:g.84037813_84037825dup, NC_000016.10:g.84037809_84037825dup, NC_000016.9:g.84071422_84071430del, NC_000016.9:g.84071424_84071430del, NC_000016.9:g.84071426_84071430del, NC_000016.9:g.84071427_84071430del, NC_000016.9:g.84071428_84071430del, NC_000016.9:g.84071429_84071430del, NC_000016.9:g.84071430del, NC_000016.9:g.84071430dup, NC_000016.9:g.84071429_84071430dup, NC_000016.9:g.84071428_84071430dup, NC_000016.9:g.84071427_84071430dup, NC_000016.9:g.84071426_84071430dup, NC_000016.9:g.84071425_84071430dup, NC_000016.9:g.84071424_84071430dup, NC_000016.9:g.84071423_84071430dup, NC_000016.9:g.84071422_84071430dup, NC_000016.9:g.84071421_84071430dup, NC_000016.9:g.84071420_84071430dup, NC_000016.9:g.84071419_84071430dup, NC_000016.9:g.84071418_84071430dup, NC_000016.9:g.84071414_84071430dup, NG_034136.1:g.9343_9351del, NG_034136.1:g.9345_9351del, NG_034136.1:g.9347_9351del, NG_034136.1:g.9348_9351del, NG_034136.1:g.9349_9351del, NG_034136.1:g.9350_9351del, NG_034136.1:g.9351del, NG_034136.1:g.9351dup, NG_034136.1:g.9350_9351dup, NG_034136.1:g.9349_9351dup, NG_034136.1:g.9348_9351dup, NG_034136.1:g.9347_9351dup, NG_034136.1:g.9346_9351dup, NG_034136.1:g.9345_9351dup, NG_034136.1:g.9344_9351dup, NG_034136.1:g.9343_9351dup, NG_034136.1:g.9342_9351dup, NG_034136.1:g.9341_9351dup, NG_034136.1:g.9340_9351dup, NG_034136.1:g.9339_9351dup, NG_034136.1:g.9335_9351dup

Select item 14909571658.

rs1490957165 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 16:84012877 (GRCh38)
16:84046482 (GRCh37)
Canonical SPDI:: NC_000016.10:84012876:G:A,NC_000016.10:84012876:G:T
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84012877G>A, NC_000016.10:g.84012877G>T, NC_000016.9:g.84046482G>A, NC_000016.9:g.84046482G>T, NG_034136.1:g.34281C>T, NG_034136.1:g.34281C>A

Select item 14909166389.

rs1490916638 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:84017830 (GRCh38)
16:84051435 (GRCh37)
Canonical SPDI:: NC_000016.10:84017829:G:C
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84017830G>C, NC_000016.9:g.84051435G>C, NG_034136.1:g.29328C>G

Select item 149082054110.

rs1490820541 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 16:84032796 (GRCh38)
16:84066401 (GRCh37)
Canonical SPDI:: NC_000016.10:84032795:TT:T
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.84032797del, NC_000016.9:g.84066402del, NG_034136.1:g.14362del

Select item 149070985111.

rs1490709851 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:84042314 (GRCh38)
16:84075919 (GRCh37)
Canonical SPDI:: NC_000016.10:84042313:G:A
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000016.10:g.84042314G>A, NC_000016.9:g.84075919G>A, NG_034136.1:g.4844C>T

Select item 149069470612.

rs1490694706 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 16:84015945 (GRCh38)
16:84049550 (GRCh37)
Canonical SPDI:: NC_000016.10:84015944:C:G,NC_000016.10:84015944:C:T
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000026/7 (TOPMED)
HGVS:: NC_000016.10:g.84015945C>G, NC_000016.10:g.84015945C>T, NC_000016.9:g.84049550C>G, NC_000016.9:g.84049550C>T, NG_034136.1:g.31213G>C, NG_034136.1:g.31213G>A

Select item 149066431913.

rs1490664319 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:84025194 (GRCh38)
16:84058799 (GRCh37)
Canonical SPDI:: NC_000016.10:84025193:T:G
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84025194T>G, NC_000016.9:g.84058799T>G, NG_034136.1:g.21964A>C

Select item 149063489014.

rs1490634890 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 16:84039747 (GRCh38)
16:84073352 (GRCh37)
Canonical SPDI:: NC_000016.10:84039746:A:C
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.10875/1290 (ALFA)
C=0.01079/6 (NorthernSweden)
C=0.04661/136 (KOREAN)
C=0.26318/3582 (TOMMO)
A=0.5/10 (SGDP_PRJ)
HGVS:: NC_000016.10:g.84039747A>C, NC_000016.9:g.84073352A>C, NG_034136.1:g.7411T>G

Select item 149059297915.

rs1490592979 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 16:84017199 (GRCh38)
16:84050804 (GRCh37)
Canonical SPDI:: NC_000016.10:84017198:G:A,NC_000016.10:84017198:G:C
Gene:: SLC38A8 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000054/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000016.10:g.84017199G>A, NC_000016.10:g.84017199G>C, NC_000016.9:g.84050804G>A, NC_000016.9:g.84050804G>C, NG_034136.1:g.29959C>T, NG_034136.1:g.29959C>G, NM_001080442.3:c.894C>T, NM_001080442.3:c.894C>G, NM_001080442.2:c.894C>T, NM_001080442.2:c.894C>G, NM_001080442.1:c.894C>T, NM_001080442.1:c.894C>G, XM_017022946.1:c.894C>T, XM_017022946.1:c.894C>G

Select item 149058902416.

rs1490589024 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 16:84022430 (GRCh38)
16:84056035 (GRCh37)
Canonical SPDI:: NC_000016.10:84022429:A:C
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.84022430A>C, NC_000016.9:g.84056035A>C, NG_034136.1:g.24728T>G

Select item 149054666617.

rs1490546666 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:84015306 (GRCh38)
16:84048911 (GRCh37)
Canonical SPDI:: NC_000016.10:84015305:A:G
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000016.10:g.84015306A>G, NC_000016.9:g.84048911A>G, NG_034136.1:g.31852T>C

Select item 149052983518.

rs1490529835 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 16:84015708 (GRCh38)
16:84049313 (GRCh37)
Canonical SPDI:: NC_000016.10:84015707:T:A
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000016.10:g.84015708T>A, NC_000016.9:g.84049313T>A, NG_034136.1:g.31450A>T

Select item 149043432619.

rs1490434326 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:84028641 (GRCh38)
16:84062246 (GRCh37)
Canonical SPDI:: NC_000016.10:84028640:T:G
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000016.10:g.84028641T>G, NC_000016.9:g.84062246T>G, NG_034136.1:g.18517A>C

Select item 149042243620.

rs1490422436 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 16:84017347 (GRCh38)
16:84050952 (GRCh37)
Canonical SPDI:: NC_000016.10:84017346:C:A,NC_000016.10:84017346:C:G
Gene:: SLC38A8 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000054/1 (ALFA)
A=0.000026/7 (TOPMED)
A=0.000029/4 (GnomAD)
A=0.000223/1 (Estonian)
G=0.004673/1 (Vietnamese)
HGVS:: NC_000016.10:g.84017347C>A, NC_000016.10:g.84017347C>G, NC_000016.9:g.84050952C>A, NC_000016.9:g.84050952C>G, NG_034136.1:g.29811G>T, NG_034136.1:g.29811G>C

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