SNP Links for Gene (Select 140612) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 5738

<< First< Prev

Page of 287

Next >Last >>

Select item 14910409401.

rs1491040940 has merged into rs143634480 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT,ATATAT,ATATATAT [Show Flanks]
Chromosome:: 19:56543390 (GRCh38)
19:57054759 (GRCh37)
Canonical SPDI:: NC_000019.10:56543380:TATATATATAT:TATATATAT,NC_000019.10:56543380:TATATATATAT:TATATATATATAT,NC_000019.10:56543380:TATATATATAT:TATATATATATATAT,NC_000019.10:56543380:TATATATATAT:TATATATATATATATAT
Gene:: ZFP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATATATATAT=0./0 (ALFA)
TA=0.2/8 (GENOME_DK)
TA=0.227296/876 (ALSPAC)
TA=0.231931/860 (TWINSUK)
TA=0.275/165 (NorthernSweden)
TA=0.292603/77449 (TOPMED)
TA=0.366813/1837 (1000Genomes)
HGVS:: NC_000019.10:g.56543382AT[4], NC_000019.10:g.56543382AT[6], NC_000019.10:g.56543382AT[7], NC_000019.10:g.56543382AT[8], NC_000019.9:g.57054751AT[4], NC_000019.9:g.57054751AT[6], NC_000019.9:g.57054751AT[7], NC_000019.9:g.57054751AT[8]

Select item 14908298062.

rs1490829806 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:56542856 (GRCh38)
19:57054225 (GRCh37)
Canonical SPDI:: NC_000019.10:56542855:C:T
Gene:: ZFP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.56542856C>T, NC_000019.9:g.57054225C>T

Select item 14908006733.

rs1490800673 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56545735 (GRCh38)
19:57057104 (GRCh37)
Canonical SPDI:: NC_000019.10:56545734:G:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56545735G>A, NC_000019.9:g.57057104G>A, XM_047439806.1:c.*1547C>T

Select item 14903783134.

rs1490378313 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56546428 (GRCh38)
19:57057797 (GRCh37)
Canonical SPDI:: NC_000019.10:56546427:G:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56546428G>A, NC_000019.9:g.57057797G>A, XM_047439806.1:c.*854C>T

Select item 14903166565.

rs1490316656 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:56538193 (GRCh38)
19:57049562 (GRCh37)
Canonical SPDI:: NC_000019.10:56538192:G:T
Gene:: ZFP28 (Varview), ZFP28-DT (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00018/3 (TOMMO)
T=0.00068/2 (KOREAN)
T=0.00109/2 (Korea1K)
HGVS:: NC_000019.10:g.56538193G>T, NC_000019.9:g.57049562G>T

Select item 14903003226.

rs1490300322 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56539311 (GRCh38)
19:57050680 (GRCh37)
Canonical SPDI:: NC_000019.10:56539310:G:A
Gene:: ZFP28 (Varview), ZFP28-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.56539311G>A, NC_000019.9:g.57050680G>A, XM_011526462.4:c.-293G>A, XM_011526462.3:c.-293G>A, XM_011526462.2:c.-293G>A, XM_011526462.1:c.-293G>A

Select item 14902796517.

rs1490279651 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:56555262 (GRCh38)
19:57066631 (GRCh37)
Canonical SPDI:: NC_000019.10:56555261:C:T
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: genic_downstream_transcript_variant,missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56555262C>T, NC_000019.9:g.57066631C>T, XM_011526463.4:c.2450C>T, XM_011526463.3:c.2450C>T, XM_011526463.2:c.2450C>T, XM_011526463.1:c.2186C>T, XM_011526462.4:c.2186C>T, XM_011526462.3:c.2186C>T, XM_011526462.2:c.2186C>T, XM_011526462.1:c.2186C>T, NM_020828.2:c.2477C>T, NM_020828.1:c.2477C>T, XP_011524765.2:p.Ala817Val, XP_011524764.1:p.Ala729Val, NP_065879.1:p.Ala826Val

Select item 14899872198.

rs1489987219 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 19:56546332 (GRCh38)
19:57057701 (GRCh37)
Canonical SPDI:: NC_000019.10:56546331:C:A,NC_000019.10:56546331:C:G
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.56546332C>A, NC_000019.10:g.56546332C>G, NC_000019.9:g.57057701C>A, NC_000019.9:g.57057701C>G, XM_047439806.1:c.*950G>T, XM_047439806.1:c.*950G>C

Select item 14898707989.

rs1489870798 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 19:56549494 (GRCh38)
19:57060863 (GRCh37)
Canonical SPDI:: NC_000019.10:56549493:T:A,NC_000019.10:56549493:T:G
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.002205/36 (ALFA)
A=0.000008/2 (TOPMED)
G=0.000354/10 (TOMMO)
HGVS:: NC_000019.10:g.56549494T>A, NC_000019.10:g.56549494T>G, NC_000019.9:g.57060863T>A, NC_000019.9:g.57060863T>G

Select item 148981113310.

rs1489811133 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:56539014 (GRCh38)
19:57050383 (GRCh37)
Canonical SPDI:: NC_000019.10:56539013:G:A,NC_000019.10:56539013:G:T
Gene:: ZFP28 (Varview), ZFP28-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56539014G>A, NC_000019.10:g.56539014G>T, NC_000019.9:g.57050383G>A, NC_000019.9:g.57050383G>T, NM_020828.2:c.-5G>A, NM_020828.2:c.-5G>T, NM_020828.1:c.-5G>A, NM_020828.1:c.-5G>T, NM_001308440.2:c.-5G>A, NM_001308440.2:c.-5G>T, NM_001308440.1:c.-5G>A, NM_001308440.1:c.-5G>T

Select item 148971215611.

rs1489712156 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:56550211 (GRCh38)
19:57061580 (GRCh37)
Canonical SPDI:: NC_000019.10:56550210:C:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.00007/1 (ALFA)
HGVS:: NC_000019.10:g.56550211C>A, NC_000019.9:g.57061580C>A

Select item 148924660112.

rs1489246601 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56556959 (GRCh38)
19:57068328 (GRCh37)
Canonical SPDI:: NC_000019.10:56556958:G:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.56556959G>A, NC_000019.9:g.57068328G>A

Select item 148911113313.

rs1489111133 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:56540577 (GRCh38)
19:57051946 (GRCh37)
Canonical SPDI:: NC_000019.10:56540576:T:C
Gene:: ZFP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56540577T>C, NC_000019.9:g.57051946T>C

Select item 148909490214.

rs1489094902 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:56559565 (GRCh38)
19:57070934 (GRCh37)
Canonical SPDI:: NC_000019.10:56559564:A:C
Gene:: ZNF470-DT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000019.10:g.56559565A>C, NC_000019.9:g.57070934A>C

Select item 148906995515.

rs1489069955 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:56555393 (GRCh38)
19:57066762 (GRCh37)
Canonical SPDI:: NC_000019.10:56555392:C:T
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (GnomAD_exomes)
T=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.56555393C>T, NC_000019.9:g.57066762C>T, XM_011526463.4:c.*1C>T, XM_011526463.3:c.*1C>T, XM_011526463.2:c.*1C>T, XM_011526463.1:c.*1C>T, XM_011526462.4:c.*1C>T, XM_011526462.3:c.*1C>T, XM_011526462.2:c.*1C>T, XM_011526462.1:c.*1C>T, NM_020828.2:c.*1C>T, NM_020828.1:c.*1C>T

Select item 148893764616.

rs1488937646 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56538795 (GRCh38)
19:57050164 (GRCh37)
Canonical SPDI:: NC_000019.10:56538794:G:A
Gene:: ZFP28 (Varview), ZFP28-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00126/15 (ALFA)
A=0.00027/27 (GnomAD)
A=0.00082/12 (TOMMO)
HGVS:: NC_000019.10:g.56538795G>A, NC_000019.9:g.57050164G>A

Select item 148893744417.

rs1488937444 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:56552819 (GRCh38)
19:57064188 (GRCh37)
Canonical SPDI:: NC_000019.10:56552818:C:T
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.56552819C>T, NC_000019.9:g.57064188C>T, NM_001308440.2:c.*2062C>T, NM_001308440.1:c.*2062C>T

Select item 148862717418.

rs1488627174 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:56548145 (GRCh38)
19:57059514 (GRCh37)
Canonical SPDI:: NC_000019.10:56548144:G:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.56548145G>A, NC_000019.9:g.57059514G>A

Select item 148858825819.

rs1488588258 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:56547653 (GRCh38)
19:57059022 (GRCh37)
Canonical SPDI:: NC_000019.10:56547652:T:A
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000019.10:g.56547653T>A, NC_000019.9:g.57059022T>A

Select item 148853356420.

rs1488533564 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:56557043 (GRCh38)
19:57068412 (GRCh37)
Canonical SPDI:: NC_000019.10:56557042:C:A,NC_000019.10:56557042:C:G,NC_000019.10:56557042:C:T
Gene:: ZFP28 (Varview), ZNF470-DT (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000019.10:g.56557043C>A, NC_000019.10:g.56557043C>G, NC_000019.10:g.56557043C>T, NC_000019.9:g.57068412C>A, NC_000019.9:g.57068412C>G, NC_000019.9:g.57068412C>T