SNP Links for Gene (Select 127435) - SNP

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Items: 1 to 20 of 1000

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Select item 14909676211.

rs1490967621 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53069680 (GRCh38)
1:53535352 (GRCh37)
Canonical SPDI:: NC_000001.11:53069679:G:A
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53069680G>A, NC_000001.10:g.53535352G>A, NG_051094.1:g.12629G>A

Select item 14909595822.

rs1490959582 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:53068684 (GRCh38)
1:53534356 (GRCh37)
Canonical SPDI:: NC_000001.11:53068683:G:C
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53068684G>C, NC_000001.10:g.53534356G>C, NG_051094.1:g.11633G>C

Select item 14908207413.

rs1490820741 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:53061285 (GRCh38)
1:53526957 (GRCh37)
Canonical SPDI:: NC_000001.11:53061284:G:T
Gene:: PODN (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.53061285G>T, NC_000001.10:g.53526957G>T, NG_051094.1:g.4234G>T

Select item 14907058464.

rs1490705846 [Homo sapiens]

Variant type:: DELINS
Alleles:: TAAA>- [Show Flanks]
Chromosome:: 1:53072133 (GRCh38)
1:53537805 (GRCh37)
Canonical SPDI:: NC_000001.11:53072125:AAATAAATAAA:AAATAAA
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAATAAA=0.000214/3 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000001.11:g.53072129TAAA[1], NC_000001.10:g.53537801TAAA[1], NG_051094.1:g.15078TAAA[1]

Select item 14904490475.

rs1490449047 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:53076822 (GRCh38)
1:53542494 (GRCh37)
Canonical SPDI:: NC_000001.11:53076821:A:G
Gene:: PODN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53076822A>G, NC_000001.10:g.53542494A>G, NG_051094.1:g.19771A>G

Select item 14898870246.

rs1489887024 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53071236 (GRCh38)
1:53536908 (GRCh37)
Canonical SPDI:: NC_000001.11:53071235:C:T
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000061/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.53071236C>T, NC_000001.10:g.53536908C>T, NG_051094.1:g.14185C>T

Select item 14896525667.

rs1489652566 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53067502 (GRCh38)
1:53533174 (GRCh37)
Canonical SPDI:: NC_000001.11:53067501:C:T
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.53067502C>T, NC_000001.10:g.53533174C>T, NG_051094.1:g.10451C>T

Select item 14896125768.

rs1489612576 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:53085502 (GRCh38)
1:53551174 (GRCh37)
Canonical SPDI:: NC_000001.11:53085501:A:C
Gene:: PODN (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53085502A>C, NC_000001.10:g.53551174A>C, NG_051094.1:g.28451A>C, NM_153703.4:c.*1017A>C, NM_001199080.2:c.*1017A>C, NM_001199081.2:c.*1017A>C, NM_001199080.1:c.*1017A>C, NM_001199081.1:c.*1017A>C, NM_001199082.1:c.*1017A>C

Select item 14895554099.

rs1489555409 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:53076290 (GRCh38)
1:53541962 (GRCh37)
Canonical SPDI:: NC_000001.11:53076289:T:C
Gene:: PODN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53076290T>C, NC_000001.10:g.53541962T>C, NG_051094.1:g.19239T>C

Select item 148948363910.

rs1489483639 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:53082030 (GRCh38)
1:53547702 (GRCh37)
Canonical SPDI:: NC_000001.11:53082029:C:A,NC_000001.11:53082029:C:T
Gene:: PODN (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000056/2 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000012/3 (GnomAD_exomes)
A=0.00006/1 (TOMMO)
A=0.000685/2 (KOREAN)
HGVS:: NC_000001.11:g.53082030C>A, NC_000001.11:g.53082030C>T, NC_000001.10:g.53547702C>A, NC_000001.10:g.53547702C>T, NG_051094.1:g.24979C>A, NG_051094.1:g.24979C>T, NM_153703.5:c.1711C>A, NM_153703.5:c.1711C>T, NM_153703.4:c.1855C>A, NM_153703.4:c.1855C>T, NM_001199080.4:c.1711C>A, NM_001199080.4:c.1711C>T, NM_001199080.3:c.1798C>A, NM_001199080.3:c.1798C>T, NM_001199080.2:c.1798C>A, NM_001199080.2:c.1798C>T, NM_001199080.1:c.1798C>A, NM_001199080.1:c.1798C>T, NM_001199081.3:c.1711C>A, NM_001199081.3:c.1711C>T, NM_001199081.2:c.1798C>A, NM_001199081.2:c.1798C>T, NM_001199081.1:c.1798C>A, NM_001199081.1:c.1798C>T, XM_005270457.4:c.1711C>A, XM_005270457.4:c.1711C>T, XM_005270457.3:c.1711C>A, XM_005270457.3:c.1711C>T, XM_005270457.2:c.1711C>A, XM_005270457.2:c.1711C>T, XM_005270457.1:c.1711C>A, XM_005270457.1:c.1711C>T, XR_001736973.3:n.1897C>A, XR_001736973.3:n.1897C>T, XR_001736973.2:n.1912C>A, XR_001736973.2:n.1912C>T, XR_001736973.1:n.1941C>A, XR_001736973.1:n.1941C>T, XM_011540677.3:c.1078C>A, XM_011540677.3:c.1078C>T, XM_011540677.2:c.1078C>A, XM_011540677.2:c.1078C>T, XM_011540677.1:c.1078C>A, XM_011540677.1:c.1078C>T, NM_001199082.1:c.1429C>A, NM_001199082.1:c.1429C>T, NP_714914.3:p.Leu571Met, NP_001186009.2:p.Leu571Met, NP_001186010.2:p.Leu571Met, XP_005270514.1:p.Leu571Met, XP_011538979.1:p.Leu360Met

Select item 148923332911.

rs1489233329 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:53070708 (GRCh38)
1:53536380 (GRCh37)
Canonical SPDI:: NC_000001.11:53070707:G:A,NC_000001.11:53070707:G:T
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.53070708G>A, NC_000001.11:g.53070708G>T, NC_000001.10:g.53536380G>A, NC_000001.10:g.53536380G>T, NG_051094.1:g.13657G>A, NG_051094.1:g.13657G>T

Select item 148913985612.

rs1489139856 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:53075340 (GRCh38)
1:53541012 (GRCh37)
Canonical SPDI:: NC_000001.11:53075339:A:C
Gene:: PODN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53075340A>C, NC_000001.10:g.53541012A>C, NG_051094.1:g.18289A>C

Select item 148895921113.

rs1488959211 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:53071697 (GRCh38)
1:53537369 (GRCh37)
Canonical SPDI:: NC_000001.11:53071696:G:C
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53071697G>C, NC_000001.10:g.53537369G>C, NG_051094.1:g.14646G>C

Select item 148873023214.

rs1488730232 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53085372 (GRCh38)
1:53551044 (GRCh37)
Canonical SPDI:: NC_000001.11:53085371:C:T
Gene:: PODN (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.53085372C>T, NC_000001.10:g.53551044C>T, NG_051094.1:g.28321C>T, NM_153703.5:c.*887C>T, NM_153703.4:c.*887C>T, NM_001199080.4:c.*887C>T, NM_001199080.3:c.*887C>T, NM_001199080.2:c.*887C>T, NM_001199080.1:c.*887C>T, NM_001199081.3:c.*887C>T, NM_001199081.2:c.*887C>T, NM_001199081.1:c.*887C>T, XM_005270457.4:c.*887C>T, XM_005270457.3:c.*887C>T, XM_005270457.2:c.*887C>T, XM_005270457.1:c.*887C>T, XR_001736973.3:n.2915C>T, XR_001736973.2:n.2930C>T, XR_001736973.1:n.2959C>T, XM_011540677.3:c.*887C>T, XM_011540677.2:c.*887C>T, XM_011540677.1:c.*887C>T, NM_001199082.1:c.*887C>T

Select item 148844509715.

rs1488445097 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:53077159 (GRCh38)
1:53542831 (GRCh37)
Canonical SPDI:: NC_000001.11:53077158:G:C
Gene:: PODN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.53077159G>C, NC_000001.10:g.53542831G>C, NG_051094.1:g.20108G>C

Select item 148818469816.

rs1488184698 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53085220 (GRCh38)
1:53550892 (GRCh37)
Canonical SPDI:: NC_000001.11:53085219:C:T
Gene:: PODN (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53085220C>T, NC_000001.10:g.53550892C>T, NG_051094.1:g.28169C>T, NM_153703.5:c.*735C>T, NM_153703.4:c.*735C>T, NM_001199080.4:c.*735C>T, NM_001199080.3:c.*735C>T, NM_001199080.2:c.*735C>T, NM_001199080.1:c.*735C>T, NM_001199081.3:c.*735C>T, NM_001199081.2:c.*735C>T, NM_001199081.1:c.*735C>T, XM_005270457.4:c.*735C>T, XM_005270457.3:c.*735C>T, XM_005270457.2:c.*735C>T, XM_005270457.1:c.*735C>T, XR_001736973.3:n.2763C>T, XR_001736973.2:n.2778C>T, XR_001736973.1:n.2807C>T, XM_011540677.3:c.*735C>T, XM_011540677.2:c.*735C>T, XM_011540677.1:c.*735C>T, NM_001199082.1:c.*735C>T

Select item 148805511017.

rs1488055110 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53079244 (GRCh38)
1:53544916 (GRCh37)
Canonical SPDI:: NC_000001.11:53079243:G:A
Gene:: PODN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53079244G>A, NC_000001.10:g.53544916G>A, NG_051094.1:g.22193G>A

Select item 148791942718.

rs1487919427 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53067401 (GRCh38)
1:53533073 (GRCh37)
Canonical SPDI:: NC_000001.11:53067400:C:T
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.53067401C>T, NC_000001.10:g.53533073C>T, NG_051094.1:g.10350C>T

Select item 148770791819.

rs1487707918 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 1:53063926 (GRCh38)
1:53529598 (GRCh37)
Canonical SPDI:: NC_000001.11:53063925:AAA:AA
Gene:: PODN (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53063928del, NC_000001.10:g.53529600del, NG_051094.1:g.6877del

Select item 148752110120.

rs1487521101 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:53078872 (GRCh38)
1:53544544 (GRCh37)
Canonical SPDI:: NC_000001.11:53078871:T:C
Gene:: PODN (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53078872T>C, NC_000001.10:g.53544544T>C, NG_051094.1:g.21821T>C, NM_153703.5:c.1362T>C, NM_153703.4:c.1506T>C, NM_001199080.4:c.1362T>C, NM_001199080.3:c.1449T>C, NM_001199080.2:c.1449T>C, NM_001199080.1:c.1449T>C, NM_001199081.3:c.1362T>C, NM_001199081.2:c.1449T>C, NM_001199081.1:c.1449T>C, XM_005270457.4:c.1362T>C, XM_005270457.3:c.1362T>C, XM_005270457.2:c.1362T>C, XM_005270457.1:c.1362T>C, XR_001736973.3:n.1513T>C, XR_001736973.2:n.1528T>C, XR_001736973.1:n.1557T>C, XM_011540677.3:c.729T>C, XM_011540677.2:c.729T>C, XM_011540677.1:c.729T>C, NM_001199082.1:c.1080T>C

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