SNP Links for Gene (Select 127059) - SNP

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Select item 14900866371.

rs1490086637 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:248145010 (GRCh38)
1:248308312 (GRCh37)
Canonical SPDI:: NC_000001.11:248145009:G:C
Gene:: OR2M5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.248145010G>C, NC_000001.10:g.248308312G>C

Select item 14900558862.

rs1490055886 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:248144181 (GRCh38)
1:248307483 (GRCh37)
Canonical SPDI:: NC_000001.11:248144180:T:C
Gene:: OR2M5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.248144181T>C, NC_000001.10:g.248307483T>C

Select item 14892692763.

rs1489269276 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:248143511 (GRCh38)
1:248306813 (GRCh37)
Canonical SPDI:: NC_000001.11:248143510:C:A,NC_000001.11:248143510:C:T
Gene:: OR2M5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.248143511C>A, NC_000001.11:g.248143511C>T, NC_000001.10:g.248306813C>A, NC_000001.10:g.248306813C>T

Select item 14884986004.

rs1488498600 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:248144902 (GRCh38)
1:248308204 (GRCh37)
Canonical SPDI:: NC_000001.11:248144901:G:
Gene:: OR2M5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.248144902del, NC_000001.10:g.248308204del

Select item 14874899425.

rs1487489942 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:248145667 (GRCh38)
1:248308969 (GRCh37)
Canonical SPDI:: NC_000001.11:248145666:A:G
Gene:: OR2M5 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.248145667A>G, NC_000001.10:g.248308969A>G, NM_001004690.1:c.520A>G, NP_001004690.1:p.Ile174Val

Select item 14865404056.

rs1486540405 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:248145597 (GRCh38)
1:248308899 (GRCh37)
Canonical SPDI:: NC_000001.11:248145596:C:G
Gene:: OR2M5 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.248145597C>G, NC_000001.10:g.248308899C>G, NM_001004690.1:c.450C>G, NP_001004690.1:p.Ile150Met

Select item 14860133357.

rs1486013335 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 1:248145594 (GRCh38)
1:248308896 (GRCh37)
Canonical SPDI:: NC_000001.11:248145593:G:C,NC_000001.11:248145593:G:T
Gene:: OR2M5 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.248145594G>C, NC_000001.11:g.248145594G>T, NC_000001.10:g.248308896G>C, NC_000001.10:g.248308896G>T, NM_001004690.1:c.447G>C, NM_001004690.1:c.447G>T, NP_001004690.1:p.Trp149Cys, NP_001004690.1:p.Trp149Cys

Select item 14851777138.

rs1485177713 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 1:248144458 (GRCh38)
1:248307760 (GRCh37)
Canonical SPDI:: NC_000001.11:248144457:T:
Gene:: OR2M5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.248144458del, NC_000001.10:g.248307760del

Select item 14835072469.

rs1483507246 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:248144585 (GRCh38)
1:248307887 (GRCh37)
Canonical SPDI:: NC_000001.11:248144584:G:A
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.248144585G>A, NC_000001.10:g.248307887G>A

Select item 148265401610.

rs1482654016 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:248145007 (GRCh38)
1:248308309 (GRCh37)
Canonical SPDI:: NC_000001.11:248145006:T:C
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.248145007T>C, NC_000001.10:g.248308309T>C

Select item 148224576511.

rs1482245765 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:248146014 (GRCh38)
1:248309316 (GRCh37)
Canonical SPDI:: NC_000001.11:248146013:C:A
Gene:: OR2M5 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.248146014C>A, NC_000001.10:g.248309316C>A, NM_001004690.1:c.867C>A

Select item 148180450912.

rs1481804509 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:248143225 (GRCh38)
1:248306527 (GRCh37)
Canonical SPDI:: NC_000001.11:248143224:C:A,NC_000001.11:248143224:C:T
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.248143225C>A, NC_000001.11:g.248143225C>T, NC_000001.10:g.248306527C>A, NC_000001.10:g.248306527C>T

Select item 148081741313.

rs1480817413 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:248146188 (GRCh38)
1:248309490 (GRCh37)
Canonical SPDI:: NC_000001.11:248146187:G:A
Gene:: OR2M5 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.248146188G>A, NC_000001.10:g.248309490G>A

Select item 148065391614.

rs1480653916 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:248143540 (GRCh38)
1:248306842 (GRCh37)
Canonical SPDI:: NC_000001.11:248143539:T:C
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.248143540T>C, NC_000001.10:g.248306842T>C

Select item 148050427415.

rs1480504274 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:248144991 (GRCh38)
1:248308293 (GRCh37)
Canonical SPDI:: NC_000001.11:248144990:T:C
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.248144991T>C, NC_000001.10:g.248308293T>C

Select item 148042533016.

rs1480425330 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:248143770 (GRCh38)
1:248307072 (GRCh37)
Canonical SPDI:: NC_000001.11:248143769:A:G
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.248143770A>G, NC_000001.10:g.248307072A>G

Select item 147857525417.

rs1478575254 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:248145869 (GRCh38)
1:248309171 (GRCh37)
Canonical SPDI:: NC_000001.11:248145868:G:T
Gene:: OR2M5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.248145869G>T, NC_000001.10:g.248309171G>T, NM_001004690.1:c.722G>T, NP_001004690.1:p.Cys241Phe

Select item 147786644218.

rs1477866442 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:248145924 (GRCh38)
1:248309226 (GRCh37)
Canonical SPDI:: NC_000001.11:248145923:C:T
Gene:: OR2M5 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.248145924C>T, NC_000001.10:g.248309226C>T, NM_001004690.1:c.777C>T

Select item 147753451219.

rs1477534512 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:248143207 (GRCh38)
1:248306509 (GRCh37)
Canonical SPDI:: NC_000001.11:248143206:G:A,NC_000001.11:248143206:G:T
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.248143207G>A, NC_000001.11:g.248143207G>T, NC_000001.10:g.248306509G>A, NC_000001.10:g.248306509G>T

Select item 147601384420.

rs1476013844 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:248144229 (GRCh38)
1:248307531 (GRCh37)
Canonical SPDI:: NC_000001.11:248144228:A:G
Gene:: OR2M5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.248144229A>G, NC_000001.10:g.248307531A>G

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