SNP Links for Gene (Select 126370) - SNP

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Select item 14914550891.

rs1491455089 [Homo sapiens]

Variant type:: INS
Alleles:: ->A,ATA,ATATATATATA,ATATATATATATATA,ATATATG,ATATG,ATG,ATGTTTTG,C,G,GTTTTG [Show Flanks]
Chromosome:: 19:15085177 (GRCh38)
19:15195989 (GRCh37)
Canonical SPDI:: NC_000019.10:15085177::A,NC_000019.10:15085177::ATA,NC_000019.10:15085177::ATATATATATA,NC_000019.10:15085177::ATATATATATATATA,NC_000019.10:15085177::ATATATG,NC_000019.10:15085177::ATATG,NC_000019.10:15085177::ATG,NC_000019.10:15085177::ATGTTTTG,NC_000019.10:15085177::C,NC_000019.10:15085177::G,NC_000019.10:15085177::GTTTTG
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATA=0./0 (ALFA)
HGVS:: NC_000019.10:g.15085177_15085178insA, NC_000019.10:g.15085177_15085178insATA, NC_000019.10:g.15085177_15085178insATATATATATA, NC_000019.10:g.15085177_15085178insATATATATATATATA, NC_000019.10:g.15085177_15085178insATATATG, NC_000019.10:g.15085177_15085178insATATG, NC_000019.10:g.15085177_15085178insATG, NC_000019.10:g.15085177_15085178insATGTTTTG, NC_000019.10:g.15085177_15085178insC, NC_000019.10:g.15085177_15085178insG, NC_000019.10:g.15085177_15085178insGTTTTG, NC_000019.9:g.15195988_15195989insA, NC_000019.9:g.15195988_15195989insATA, NC_000019.9:g.15195988_15195989insATATATATATA, NC_000019.9:g.15195988_15195989insATATATATATATATA, NC_000019.9:g.15195988_15195989insATATATG, NC_000019.9:g.15195988_15195989insATATG, NC_000019.9:g.15195988_15195989insATG, NC_000019.9:g.15195988_15195989insATGTTTTG, NC_000019.9:g.15195988_15195989insC, NC_000019.9:g.15195988_15195989insG, NC_000019.9:g.15195988_15195989insGTTTTG

Select item 14913046522.

rs1491304652 has merged into rs757508009 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:15085184 (GRCh38)
19:15195995 (GRCh37)
Canonical SPDI:: NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:15085176:TTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
-=0.375/15 (GENOME_DK)
HGVS:: NC_000019.10:g.15085184_15085187del, NC_000019.10:g.15085185_15085187del, NC_000019.10:g.15085186_15085187del, NC_000019.10:g.15085187del, NC_000019.10:g.15085187dup, NC_000019.10:g.15085186_15085187dup, NC_000019.10:g.15085185_15085187dup, NC_000019.10:g.15085184_15085187dup, NC_000019.10:g.15085183_15085187dup, NC_000019.10:g.15085182_15085187dup, NC_000019.10:g.15085181_15085187dup, NC_000019.10:g.15085180_15085187dup, NC_000019.10:g.15085179_15085187dup, NC_000019.10:g.15085178_15085187dup, NC_000019.10:g.15085177_15085187dup, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTT, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTTT, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTTTT, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTTTTT, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTTTTTT, NC_000019.10:g.15085187_15085188insTTTTTTTTTTTTTTTTT, NC_000019.9:g.15195995_15195998del, NC_000019.9:g.15195996_15195998del, NC_000019.9:g.15195997_15195998del, NC_000019.9:g.15195998del, NC_000019.9:g.15195998dup, NC_000019.9:g.15195997_15195998dup, NC_000019.9:g.15195996_15195998dup, NC_000019.9:g.15195995_15195998dup, NC_000019.9:g.15195994_15195998dup, NC_000019.9:g.15195993_15195998dup, NC_000019.9:g.15195992_15195998dup, NC_000019.9:g.15195991_15195998dup, NC_000019.9:g.15195990_15195998dup, NC_000019.9:g.15195989_15195998dup, NC_000019.9:g.15195988_15195998dup, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTT, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTTT, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTTTT, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTTTTT, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTTTTTT, NC_000019.9:g.15195998_15195999insTTTTTTTTTTTTTTTTT

Select item 14908485323.

rs1490848532 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:15088090 (GRCh38)
19:15198901 (GRCh37)
Canonical SPDI:: NC_000019.10:15088089:C:A
Gene:: OR1I1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15088090C>A, NC_000019.9:g.15198901C>A, NM_001004713.2:c.1025C>A, NM_001004713.1:c.1025C>A, NP_001004713.1:p.Pro342His

Select item 14903516524.

rs1490351652 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:15088594 (GRCh38)
19:15199405 (GRCh37)
Canonical SPDI:: NC_000019.10:15088593:T:G
Gene:: OR1I1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15088594T>G, NC_000019.9:g.15199405T>G, NM_001004713.2:c.*461T>G

Select item 14892301675.

rs1489230167 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:15086373 (GRCh38)
19:15197184 (GRCh37)
Canonical SPDI:: NC_000019.10:15086372:A:G
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.15086373A>G, NC_000019.9:g.15197184A>G

Select item 14887277066.

rs1488727706 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15088232 (GRCh38)
19:15199043 (GRCh37)
Canonical SPDI:: NC_000019.10:15088231:C:T
Gene:: OR1I1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.15088232C>T, NC_000019.9:g.15199043C>T, NM_001004713.2:c.*99C>T

Select item 14880971567.

rs1488097156 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:15088088 (GRCh38)
19:15198899 (GRCh37)
Canonical SPDI:: NC_000019.10:15088087:C:G
Gene:: OR1I1 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15088088C>G, NC_000019.9:g.15198899C>G, NM_001004713.2:c.1023C>G, NM_001004713.1:c.1023C>G, NP_001004713.1:p.Tyr341Ter

Select item 14873416838.

rs1487341683 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15086671 (GRCh38)
19:15197482 (GRCh37)
Canonical SPDI:: NC_000019.10:15086670:G:A
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15086671G>A, NC_000019.9:g.15197482G>A

Select item 14863717039.

rs1486371703 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGG>- [Show Flanks]
Chromosome:: 19:15086025 (GRCh38)
19:15196836 (GRCh37)
Canonical SPDI:: NC_000019.10:15086023:GAGG:G
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.15086025_15086027del, NC_000019.9:g.15196836_15196838del

Select item 148595070610.

rs1485950706 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:15085370 (GRCh38)
19:15196181 (GRCh37)
Canonical SPDI:: NC_000019.10:15085369:T:G
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000019.10:g.15085370T>G, NC_000019.9:g.15196181T>G

Select item 148589418711.

rs1485894187 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:15088385 (GRCh38)
19:15199196 (GRCh37)
Canonical SPDI:: NC_000019.10:15088384:T:C
Gene:: OR1I1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
C=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.15088385T>C, NC_000019.9:g.15199196T>C, NM_001004713.2:c.*252T>C

Select item 148538937812.

rs1485389378 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15086509 (GRCh38)
19:15197320 (GRCh37)
Canonical SPDI:: NC_000019.10:15086508:C:T
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15086509C>T, NC_000019.9:g.15197320C>T

Select item 148507785313.

rs1485077853 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:15085221 (GRCh38)
19:15196032 (GRCh37)
Canonical SPDI:: NC_000019.10:15085220:A:G
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.15085221A>G, NC_000019.9:g.15196032A>G

Select item 148362840814.

rs1483628408 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 19:15085073 (GRCh38)
19:15195884 (GRCh37)
Canonical SPDI:: NC_000019.10:15085071:GTG:G
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.15085073_15085074del, NC_000019.9:g.15195884_15195885del

Select item 148356481315.

rs1483564813 [Homo sapiens]

Variant type:: DEL
Alleles:: ATATATATATATATATATATATA>- [Show Flanks]
Chromosome:: 19:15085148 (GRCh38)
19:15195959 (GRCh37)
Canonical SPDI:: NC_000019.10:15085147:ATATATATATATATATATATATA:
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00177/21 (ALFA)
-=0.01341/408 (GnomAD)
HGVS:: NC_000019.10:g.15085148_15085170del, NC_000019.9:g.15195959_15195981del

Select item 148316282016.

rs1483162820 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15088340 (GRCh38)
19:15199151 (GRCh37)
Canonical SPDI:: NC_000019.10:15088339:G:A
Gene:: OR1I1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.15088340G>A, NC_000019.9:g.15199151G>A, NM_001004713.2:c.*207G>A

Select item 148282875817.

rs1482828758 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:15087133 (GRCh38)
19:15197944 (GRCh37)
Canonical SPDI:: NC_000019.10:15087132:A:C
Gene:: OR1I1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15087133A>C, NC_000019.9:g.15197944A>C, NM_001004713.2:c.68A>C, NM_001004713.1:c.68A>C, NP_001004713.1:p.His23Pro

Select item 148136098418.

rs1481360984 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15088445 (GRCh38)
19:15199256 (GRCh37)
Canonical SPDI:: NC_000019.10:15088444:G:A
Gene:: OR1I1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15088445G>A, NC_000019.9:g.15199256G>A, NM_001004713.2:c.*312G>A

Select item 147876034919.

rs1478760349 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15087491 (GRCh38)
19:15198302 (GRCh37)
Canonical SPDI:: NC_000019.10:15087490:G:A
Gene:: OR1I1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15087491G>A, NC_000019.9:g.15198302G>A, NM_001004713.2:c.426G>A, NM_001004713.1:c.426G>A

Select item 147856370420.

rs1478563704 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 19:15086791 (GRCh38)
19:15197602 (GRCh37)
Canonical SPDI:: NC_000019.10:15086790:G:
Gene:: OR1I1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.15086791del, NC_000019.9:g.15197602del

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