SNP Links for Gene (Select 125962) - SNP

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Select item 14915435361.

rs1491543536 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: 19:9114711 (GRCh38)
19:9225387 (GRCh37)
Canonical SPDI:: NC_000019.10:9114710:GA:
Gene:: OR7G1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency
MAF:: -=0.00028/5 (ExAC)
HGVS:: NC_000019.10:g.9114711_9114712del, NC_000019.9:g.9225387_9225388del, NG_034045.1:g.6052_6053del

Select item 14896199692.

rs1489619969 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9116235 (GRCh38)
19:9226911 (GRCh37)
Canonical SPDI:: NC_000019.10:9116234:G:A
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9116235G>A, NC_000019.9:g.9226911G>A, NG_034045.1:g.4529C>T

Select item 14895486413.

rs1489548641 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9117109 (GRCh38)
19:9227785 (GRCh37)
Canonical SPDI:: NC_000019.10:9117108:C:T
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000019.10:g.9117109C>T, NC_000019.9:g.9227785C>T, NG_034045.1:g.3655G>A

Select item 14891152344.

rs1489115234 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9116378 (GRCh38)
19:9227054 (GRCh37)
Canonical SPDI:: NC_000019.10:9116377:A:G
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000042/11 (TOPMED)
G=0.000057/8 (GnomAD)
HGVS:: NC_000019.10:g.9116378A>G, NC_000019.9:g.9227054A>G, NG_034045.1:g.4386T>C

Select item 14884493775.

rs1488449377 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9117408 (GRCh38)
19:9228084 (GRCh37)
Canonical SPDI:: NC_000019.10:9117407:C:T
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9117408C>T, NC_000019.9:g.9228084C>T, NG_034045.1:g.3356G>A

Select item 14881629066.

rs1488162906 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9116077 (GRCh38)
19:9226753 (GRCh37)
Canonical SPDI:: NC_000019.10:9116076:G:A
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9116077G>A, NC_000019.9:g.9226753G>A, NG_034045.1:g.4687C>T

Select item 14874680367.

rs1487468036 has merged into rs775892306 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT [Show Flanks]
Chromosome:: 19:9117047 (GRCh38)
19:9227723 (GRCh37)
Canonical SPDI:: NC_000019.10:9117035:TTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:9117035:TTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:9117035:TTTTTTTTTTTTT:TTTTTTTTTTTTTT
Gene:: OR7G1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0.00469/78 (ALFA)
-=0.075/3 (GENOME_DK)
HGVS:: NC_000019.10:g.9117047_9117048del, NC_000019.10:g.9117048del, NC_000019.10:g.9117048dup, NC_000019.9:g.9227723_9227724del, NC_000019.9:g.9227724del, NC_000019.9:g.9227724dup, NG_034045.1:g.3727_3728del, NG_034045.1:g.3728del, NG_034045.1:g.3728dup

Select item 14870324858.

rs1487032485 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:9114870 (GRCh38)
19:9225546 (GRCh37)
Canonical SPDI:: NC_000019.10:9114869:C:G
Gene:: OR7G1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.9114870C>G, NC_000019.9:g.9225546C>G, NG_034045.1:g.5894G>C, NM_001005192.2:c.894G>C, NP_001005192.2:p.Lys298Asn

Select item 14827023119.

rs1482702311 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:9114509 (GRCh38)
19:9225185 (GRCh37)
Canonical SPDI:: NC_000019.10:9114508:G:A,NC_000019.10:9114508:G:T
Gene:: OR7G1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000071/1 (TOMMO)
HGVS:: NC_000019.10:g.9114509G>A, NC_000019.10:g.9114509G>T, NC_000019.9:g.9225185G>A, NC_000019.9:g.9225185G>T, NG_034045.1:g.6255C>T, NG_034045.1:g.6255C>A

Select item 148188138710.

rs1481881387 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:9114365 (GRCh38)
19:9225041 (GRCh37)
Canonical SPDI:: NC_000019.10:9114364:C:A,NC_000019.10:9114364:C:G,NC_000019.10:9114364:C:T
Gene:: OR7G1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.001227/20 (ALFA)
T=0.000147/19 (GnomAD)
T=0.00215/36 (TOMMO)
T=0.002186/14 (1000Genomes)
T=0.004937/22 (Estonian)
T=0.009582/28 (KOREAN)
HGVS:: NC_000019.10:g.9114365C>A, NC_000019.10:g.9114365C>G, NC_000019.10:g.9114365C>T, NC_000019.9:g.9225041C>A, NC_000019.9:g.9225041C>G, NC_000019.9:g.9225041C>T, NG_034045.1:g.6399G>T, NG_034045.1:g.6399G>C, NG_034045.1:g.6399G>A

Select item 148156279111.

rs1481562791 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9115024 (GRCh38)
19:9225700 (GRCh37)
Canonical SPDI:: NC_000019.10:9115023:A:G
Gene:: OR7G1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000019.10:g.9115024A>G, NC_000019.9:g.9225700A>G, NG_034045.1:g.5740T>C, NM_001005192.2:c.740T>C, NP_001005192.2:p.Val247Ala

Select item 148055580612.

rs1480555806 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 19:9117223 (GRCh38)
19:9227900 (GRCh37)
Canonical SPDI:: NC_000019.10:9117223:GGG:GGGG
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGGG=0./0 (ALFA)
G=0.000057/8 (GnomAD)
HGVS:: NC_000019.10:g.9117226dup, NC_000019.9:g.9227902dup, NG_034045.1:g.3540dup

Select item 148043869813.

rs1480438698 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9114428 (GRCh38)
19:9225104 (GRCh37)
Canonical SPDI:: NC_000019.10:9114427:A:G
Gene:: OR7G1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9114428A>G, NC_000019.9:g.9225104A>G, NG_034045.1:g.6336T>C

Select item 147963775314.

rs1479637753 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9114661 (GRCh38)
19:9225337 (GRCh37)
Canonical SPDI:: NC_000019.10:9114660:A:G
Gene:: OR7G1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
HGVS:: NC_000019.10:g.9114661A>G, NC_000019.9:g.9225337A>G, NG_034045.1:g.6103T>C

Select item 147813153715.

rs1478131537 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9116840 (GRCh38)
19:9227516 (GRCh37)
Canonical SPDI:: NC_000019.10:9116839:T:C
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.9116840T>C, NC_000019.9:g.9227516T>C, NG_034045.1:g.3924A>G

Select item 147780551416.

rs1477805514 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9115862 (GRCh38)
19:9226538 (GRCh37)
Canonical SPDI:: NC_000019.10:9115861:G:A
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9115862G>A, NC_000019.9:g.9226538G>A, NG_034045.1:g.4902C>T

Select item 147677604417.

rs1476776044 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9116225 (GRCh38)
19:9226901 (GRCh37)
Canonical SPDI:: NC_000019.10:9116224:T:C
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9116225T>C, NC_000019.9:g.9226901T>C, NG_034045.1:g.4539A>G

Select item 147673876018.

rs1476738760 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9115734 (GRCh38)
19:9226410 (GRCh37)
Canonical SPDI:: NC_000019.10:9115733:T:C
Gene:: OR7G1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9115734T>C, NC_000019.9:g.9226410T>C, NG_034045.1:g.5030A>G, NM_001005192.2:c.30A>G

Select item 147671714219.

rs1476717142 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9115104 (GRCh38)
19:9225780 (GRCh37)
Canonical SPDI:: NC_000019.10:9115103:T:C
Gene:: OR7G1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9115104T>C, NC_000019.9:g.9225780T>C, NG_034045.1:g.5660A>G, NM_001005192.2:c.660A>G

Select item 147481724620.

rs1474817246 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:9117010 (GRCh38)
19:9227686 (GRCh37)
Canonical SPDI:: NC_000019.10:9117009:A:C
Gene:: OR7G1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9117010A>C, NC_000019.9:g.9227686A>C, NG_034045.1:g.3754T>G

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