SNP Links for Gene (Select 124274) - SNP

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Select item 14915644501.

rs1491564450 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A [Show Flanks]
Chromosome:: 16:20041260 (GRCh38)
16:20052582 (GRCh37)
Canonical SPDI:: NC_000016.10:20041258:AAAA:A,NC_000016.10:20041258:AAAA:AA
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
HGVS:: NC_000016.10:g.20041260_20041262del, NC_000016.10:g.20041261_20041262del, NC_000016.9:g.20052582_20052584del, NC_000016.9:g.20052583_20052584del

Select item 14915426042.

rs1491542604 [Homo sapiens]

Variant type:: INS
Alleles:: ->GG [Show Flanks]
Chromosome:: 16:20041259 (GRCh38)
16:20052582 (GRCh37)
Canonical SPDI:: NC_000016.10:20041259::GG
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
GG=0.00134/6 (GnomAD)
HGVS:: NC_000016.10:g.20041259_20041260insGG, NC_000016.9:g.20052581_20052582insGG

Select item 14915322873.

rs1491532287 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GAAAAA [Show Flanks]
Chromosome:: 16:20051063 (GRCh38)
16:20062386 (GRCh37)
Canonical SPDI:: NC_000016.10:20051063:AAAAA:AAAAAGAAAAA
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAGAAAAA=0./0 (ALFA)
AAAAAG=0.0003/5 (GnomAD)
HGVS:: NC_000016.10:g.20051064_20051068A[5]GAAAAA[1], NC_000016.9:g.20062386_20062390A[5]GAAAAA[1]

Select item 14915070124.

rs1491507012 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 16:20052788 (GRCh38)
16:20064110 (GRCh37)
Canonical SPDI:: NC_000016.10:20052787:CA:
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000016.10:g.20052788_20052789del, NC_000016.9:g.20064110_20064111del

Select item 14914882765.

rs1491488276 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->GAGAGAGAGGAGAGAGAGAGAGAGAGAGAG
Chromosome:: no mapping
Canonical SPDI:

Select item 14914788706.

rs1491478870 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: 16:20061214 (GRCh38)
16:20072536 (GRCh37)
Canonical SPDI:: NC_000016.10:20061213:GA:
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000671/3 (ALFA)
-=0.000035/1 (TOMMO)
-=0.001879/255 (GnomAD)
HGVS:: NC_000016.10:g.20061214_20061215del, NC_000016.9:g.20072536_20072537del

Select item 14913759067.

rs1491375906 has merged into rs3041359 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 16:20051072 (GRCh38)
16:20062394 (GRCh37)
Canonical SPDI:: NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20051062:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000016.10:g.20051072_20051075del, NC_000016.10:g.20051073_20051075del, NC_000016.10:g.20051074_20051075del, NC_000016.10:g.20051075del, NC_000016.10:g.20051075dup, NC_000016.10:g.20051074_20051075dup, NC_000016.10:g.20051073_20051075dup, NC_000016.10:g.20051072_20051075dup, NC_000016.10:g.20051071_20051075dup, NC_000016.10:g.20051070_20051075dup, NC_000016.10:g.20051069_20051075dup, NC_000016.10:g.20051068_20051075dup, NC_000016.10:g.20051067_20051075dup, NC_000016.10:g.20051066_20051075dup, NC_000016.10:g.20051065_20051075dup, NC_000016.10:g.20051064_20051075dup, NC_000016.10:g.20051075_20051076insAAAAAAAAAAAAAA, NC_000016.9:g.20062394_20062397del, NC_000016.9:g.20062395_20062397del, NC_000016.9:g.20062396_20062397del, NC_000016.9:g.20062397del, NC_000016.9:g.20062397dup, NC_000016.9:g.20062396_20062397dup, NC_000016.9:g.20062395_20062397dup, NC_000016.9:g.20062394_20062397dup, NC_000016.9:g.20062393_20062397dup, NC_000016.9:g.20062392_20062397dup, NC_000016.9:g.20062391_20062397dup, NC_000016.9:g.20062390_20062397dup, NC_000016.9:g.20062389_20062397dup, NC_000016.9:g.20062388_20062397dup, NC_000016.9:g.20062387_20062397dup, NC_000016.9:g.20062386_20062397dup, NC_000016.9:g.20062397_20062398insAAAAAAAAAAAAAA

Select item 14913715558.

rs1491371555 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 16:20065877 (GRCh38)
16:20077199 (GRCh37)
Canonical SPDI:: NC_000016.10:20065876:CA:
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000016.10:g.20065877_20065878del, NC_000016.9:g.20077199_20077200del

Select item 14913681459.

rs1491368145 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 16:20053841 (GRCh38)
16:20065164 (GRCh37)
Canonical SPDI:: NC_000016.10:20053841:C:CC
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0.000071/1 (ALFA)
C=0.000132/35 (TOPMED)
C=0.000134/17 (GnomAD)
HGVS:: NC_000016.10:g.20053842dup, NC_000016.9:g.20065164dup

Select item 149132519310.

rs1491325193 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 16:20053841 (GRCh38)
16:20065163 (GRCh37)
Canonical SPDI:: NC_000016.10:20053840:TC:
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000016.10:g.20053841_20053842del, NC_000016.9:g.20065163_20065164del

Select item 149131633811.

rs1491316338 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT [Show Flanks]
Chromosome:: 16:20061059 (GRCh38)
16:20072382 (GRCh37)
Canonical SPDI:: NC_000016.10:20061059:T:TGT
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TGT=0./0 (ALFA)
TG=0.00001/1 (GnomAD)
HGVS:: NC_000016.10:g.20061060_20061061insGT, NC_000016.9:g.20072382_20072383insGT

Select item 149129257912.

rs1491292579 has merged into rs58567910 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 16:20061075 (GRCh38)
16:20072397 (GRCh37)
Canonical SPDI:: NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000016.10:20061061:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGTGT=0./0 (ALFA)
-=0.0034/13 (ALSPAC)
HGVS:: NC_000016.10:g.20061063GT[6], NC_000016.10:g.20061063GT[7], NC_000016.10:g.20061063GT[8], NC_000016.10:g.20061063GT[9], NC_000016.10:g.20061063GT[10], NC_000016.10:g.20061063GT[12], NC_000016.10:g.20061063GT[13], NC_000016.10:g.20061063GT[14], NC_000016.9:g.20072385GT[6], NC_000016.9:g.20072385GT[7], NC_000016.9:g.20072385GT[8], NC_000016.9:g.20072385GT[9], NC_000016.9:g.20072385GT[10], NC_000016.9:g.20072385GT[12], NC_000016.9:g.20072385GT[13], NC_000016.9:g.20072385GT[14]

Select item 149125960813.

rs1491259608 has merged into rs10534277 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,A,AA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 16:20068244 (GRCh38)
16:20079566 (GRCh37)
Canonical SPDI:: NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:20068236:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAA
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAA=0./0 (ALFA)
HGVS:: NC_000016.10:g.20068244_20068258del, NC_000016.10:g.20068245_20068258del, NC_000016.10:g.20068246_20068258del, NC_000016.10:g.20068248_20068258del, NC_000016.10:g.20068249_20068258del, NC_000016.10:g.20068251_20068258del, NC_000016.10:g.20068252_20068258del, NC_000016.10:g.20068253_20068258del, NC_000016.10:g.20068254_20068258del, NC_000016.10:g.20068255_20068258del, NC_000016.10:g.20068256_20068258del, NC_000016.10:g.20068257_20068258del, NC_000016.10:g.20068258del, NC_000016.10:g.20068258dup, NC_000016.10:g.20068257_20068258dup, NC_000016.10:g.20068256_20068258dup, NC_000016.10:g.20068255_20068258dup, NC_000016.10:g.20068254_20068258dup, NC_000016.10:g.20068253_20068258dup, NC_000016.10:g.20068252_20068258dup, NC_000016.10:g.20068251_20068258dup, NC_000016.10:g.20068250_20068258dup, NC_000016.10:g.20068249_20068258dup, NC_000016.10:g.20068237_20068258A[26]GAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000016.9:g.20079566_20079580del, NC_000016.9:g.20079567_20079580del, NC_000016.9:g.20079568_20079580del, NC_000016.9:g.20079570_20079580del, NC_000016.9:g.20079571_20079580del, NC_000016.9:g.20079573_20079580del, NC_000016.9:g.20079574_20079580del, NC_000016.9:g.20079575_20079580del, NC_000016.9:g.20079576_20079580del, NC_000016.9:g.20079577_20079580del, NC_000016.9:g.20079578_20079580del, NC_000016.9:g.20079579_20079580del, NC_000016.9:g.20079580del, NC_000016.9:g.20079580dup, NC_000016.9:g.20079579_20079580dup, NC_000016.9:g.20079578_20079580dup, NC_000016.9:g.20079577_20079580dup, NC_000016.9:g.20079576_20079580dup, NC_000016.9:g.20079575_20079580dup, NC_000016.9:g.20079574_20079580dup, NC_000016.9:g.20079573_20079580dup, NC_000016.9:g.20079572_20079580dup, NC_000016.9:g.20079571_20079580dup, NC_000016.9:g.20079559_20079580A[26]GAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 149125362114.

rs1491253621 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TATGGATG [Show Flanks]
Chromosome:: 16:20061214 (GRCh38)
16:20072537 (GRCh37)
Canonical SPDI:: NC_000016.10:20061214:ATGGATG:ATGGATGTATGGATG
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ATGGATGTATGGATG=0./0 (ALFA)
ATGGATGT=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.20061221_20061222insTATGGATG, NC_000016.9:g.20072543_20072544insTATGGATG

Select item 149114568115.

rs1491145681 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 16:20068236 (GRCh38)
16:20079558 (GRCh37)
Canonical SPDI:: NC_000016.10:20068235:CA:
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00042/5 (ALFA)
HGVS:: NC_000016.10:g.20068236_20068237del, NC_000016.9:g.20079558_20079559del

Select item 149107898216.

rs1491078982 has merged into rs71146301 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAC>-,AC,ACACAC,ACACACAC,ACACACACACACAC [Show Flanks]
Chromosome:: 16:20073302 (GRCh38)
16:20084624 (GRCh37)
Canonical SPDI:: NC_000016.10:20073290:CACACACACACACAC:CACACACACAC,NC_000016.10:20073290:CACACACACACACAC:CACACACACACAC,NC_000016.10:20073290:CACACACACACACAC:CACACACACACACACAC,NC_000016.10:20073290:CACACACACACACAC:CACACACACACACACACAC,NC_000016.10:20073290:CACACACACACACAC:CACACACACACACACACACACACAC
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CACACACACACAC=0./0 (ALFA)
-=0.00003/8 (TOPMED)
CA=0.200679/1005 (1000Genomes)
CA=0.24255/4062 (TOMMO)
CA=0.325/13 (GENOME_DK)
CA=0.365/219 (NorthernSweden)
HGVS:: NC_000016.10:g.20073292AC[5], NC_000016.10:g.20073292AC[6], NC_000016.10:g.20073292AC[8], NC_000016.10:g.20073292AC[9], NC_000016.10:g.20073292AC[12], NC_000016.9:g.20084614AC[5], NC_000016.9:g.20084614AC[6], NC_000016.9:g.20084614AC[8], NC_000016.9:g.20084614AC[9], NC_000016.9:g.20084614AC[12]

Select item 149103654317.

rs1491036543 has merged into rs35022647 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 16:20038039 (GRCh38)
16:20049361 (GRCh37)
Canonical SPDI:: NC_000016.10:20038027:TTTTTTTTTTTTT:TTTTTTTTTTT,NC_000016.10:20038027:TTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:20038027:TTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:20038027:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTT=0./0 (ALFA)
T=0.4257/1781 (1000Genomes)
HGVS:: NC_000016.10:g.20038039_20038040del, NC_000016.10:g.20038040del, NC_000016.10:g.20038040dup, NC_000016.10:g.20038039_20038040dup, NC_000016.9:g.20049361_20049362del, NC_000016.9:g.20049362del, NC_000016.9:g.20049362dup, NC_000016.9:g.20049361_20049362dup

Select item 149101846718.

rs1491018467 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCT>-,CT [Show Flanks]
Chromosome:: 16:20072472 (GRCh38)
16:20083794 (GRCh37)
Canonical SPDI:: NC_000016.10:20072468:TCTCTCT:TCT,NC_000016.10:20072468:TCTCTCT:TCTCT
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TCTCT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.20072470CT[1], NC_000016.10:g.20072470CT[2], NC_000016.9:g.20083792CT[1], NC_000016.9:g.20083792CT[2]

Select item 149088839119.

rs1490888391 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:20075462 (GRCh38)
16:20086784 (GRCh37)
Canonical SPDI:: NC_000016.10:20075461:G:C
Gene:: GPR139 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.20075462G>C, NC_000016.9:g.20086784G>C

Select item 149086739120.

rs1490867391 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:20060884 (GRCh38)
16:20072206 (GRCh37)
Canonical SPDI:: NC_000016.10:20060883:T:C
Gene:: GPR139 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000053/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000107/15 (GnomAD)
C=0.000156/1 (1000Genomes)
C=0.000223/1 (Estonian)
HGVS:: NC_000016.10:g.20060884T>C, NC_000016.9:g.20072206T>C

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