SNP Links for Gene (Select 120237) - SNP

Links from Gene

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Select item 14913849531.

rs1491384953 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CGGGG [Show Flanks]
Chromosome:: 11:20157006 (GRCh38)
11:20178553 (GRCh37)
Canonical SPDI:: NC_000011.10:20157006:GGGG:GGGGCGGGG
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GGGGCGGGG=0./0 (ALFA)
GGGGC=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.20157007_20157010G[4]CGGGG[1], NC_000011.9:g.20178553_20178556G[4]CGGGG[1]

Select item 14912259372.

rs1491225937 has merged into rs372654166 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,AAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 11:20159635 (GRCh38)
11:20181181 (GRCh37)
Canonical SPDI:: NC_000011.10:20159627:AAAAAAAAAAA:AAAAAAA,NC_000011.10:20159627:AAAAAAAAAAA:AAAAAAAAAA,NC_000011.10:20159627:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000011.10:20159627:AAAAAAAAAAA:AAAAAAAAAAAAA
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000011.10:g.20159635_20159638del, NC_000011.10:g.20159638del, NC_000011.10:g.20159638dup, NC_000011.10:g.20159637_20159638dup, NC_000011.9:g.20181181_20181184del, NC_000011.9:g.20181184del, NC_000011.9:g.20181184dup, NC_000011.9:g.20181183_20181184dup

Select item 14905852083.

rs1490585208 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:20160157 (GRCh38)
11:20181703 (GRCh37)
Canonical SPDI:: NC_000011.10:20160156:G:T
Gene:: DBX1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000011.10:g.20160157G>T, NC_000011.9:g.20181703G>T, NM_001029865.4:c.168C>A, NM_001029865.3:c.168C>A, NM_001029865.2:c.168C>A

Select item 14904143734.

rs1490414373 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:20155713 (GRCh38)
11:20177259 (GRCh37)
Canonical SPDI:: NC_000011.10:20155712:A:G
Gene:: DBX1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20155713A>G, NC_000011.9:g.20177259A>G

Select item 14884885175.

rs1488488517 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:20160486 (GRCh38)
11:20182032 (GRCh37)
Canonical SPDI:: NC_000011.10:20160485:C:T
Gene:: DBX1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.20160486C>T, NC_000011.9:g.20182032C>T

Select item 14883672016.

rs1488367201 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:20160834 (GRCh38)
11:20182380 (GRCh37)
Canonical SPDI:: NC_000011.10:20160833:G:T
Gene:: DBX1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.20160834G>T, NC_000011.9:g.20182380G>T

Select item 14881607347.

rs1488160734 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:20156033 (GRCh38)
11:20177579 (GRCh37)
Canonical SPDI:: NC_000011.10:20156032:G:C,NC_000011.10:20156032:G:T
Gene:: DBX1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.0004/2 (ALFA)
HGVS:: NC_000011.10:g.20156033G>C, NC_000011.10:g.20156033G>T, NC_000011.9:g.20177579G>C, NC_000011.9:g.20177579G>T

Select item 14870368718.

rs1487036871 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:20161960 (GRCh38)
11:20183506 (GRCh37)
Canonical SPDI:: NC_000011.10:20161959:A:G
Gene:: DBX1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.20161960A>G, NC_000011.9:g.20183506A>G

Select item 14869206799.

rs1486920679 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:20157475 (GRCh38)
11:20179021 (GRCh37)
Canonical SPDI:: NC_000011.10:20157474:C:G
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20157475C>G, NC_000011.9:g.20179021C>G

Select item 148669548210.

rs1486695482 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:20159562 (GRCh38)
11:20181108 (GRCh37)
Canonical SPDI:: NC_000011.10:20159561:G:A
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20159562G>A, NC_000011.9:g.20181108G>A

Select item 148623948711.

rs1486239487 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:20158300 (GRCh38)
11:20179846 (GRCh37)
Canonical SPDI:: NC_000011.10:20158299:C:T
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.20158300C>T, NC_000011.9:g.20179846C>T

Select item 148604756412.

rs1486047564 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:20160341 (GRCh38)
11:20181887 (GRCh37)
Canonical SPDI:: NC_000011.10:20160340:C:A,NC_000011.10:20160340:C:T
Gene:: DBX1 (Varview)
Functional Consequence:: 5_prime_UTR_variant
HGVS:: NC_000011.10:g.20160341C>A, NC_000011.10:g.20160341C>T, NC_000011.9:g.20181887C>A, NC_000011.9:g.20181887C>T, NM_001029865.4:c.-17G>T, NM_001029865.4:c.-17G>A

Select item 148498796813.

rs1484987968 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:20159025 (GRCh38)
11:20180571 (GRCh37)
Canonical SPDI:: NC_000011.10:20159024:G:A
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.20159025G>A, NC_000011.9:g.20180571G>A

Select item 148473893014.

rs1484738930 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:20161542 (GRCh38)
11:20183088 (GRCh37)
Canonical SPDI:: NC_000011.10:20161541:T:C
Gene:: DBX1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20161542T>C, NC_000011.9:g.20183088T>C

Select item 148387219315.

rs1483872193 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:20156662 (GRCh38)
11:20178208 (GRCh37)
Canonical SPDI:: NC_000011.10:20156661:G:A,NC_000011.10:20156661:G:C
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000071/2 (TOMMO)
HGVS:: NC_000011.10:g.20156662G>A, NC_000011.10:g.20156662G>C, NC_000011.9:g.20178208G>A, NC_000011.9:g.20178208G>C

Select item 148366647816.

rs1483666478 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:20157365 (GRCh38)
11:20178911 (GRCh37)
Canonical SPDI:: NC_000011.10:20157364:T:A,NC_000011.10:20157364:T:C
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20157365T>A, NC_000011.10:g.20157365T>C, NC_000011.9:g.20178911T>A, NC_000011.9:g.20178911T>C

Select item 148365446717.

rs1483654467 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:20155684 (GRCh38)
11:20177230 (GRCh37)
Canonical SPDI:: NC_000011.10:20155683:G:A
Gene:: DBX1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.20155684G>A, NC_000011.9:g.20177230G>A

Select item 148328726418.

rs1483287264 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:20161128 (GRCh38)
11:20182674 (GRCh37)
Canonical SPDI:: NC_000011.10:20161127:T:C
Gene:: DBX1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.20161128T>C, NC_000011.9:g.20182674T>C

Select item 148291530819.

rs1482915308 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:20158412 (GRCh38)
11:20179958 (GRCh37)
Canonical SPDI:: NC_000011.10:20158411:T:C
Gene:: DBX1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.20158412T>C, NC_000011.9:g.20179958T>C

Select item 148277956120.

rs1482779561 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:20160215 (GRCh38)
11:20181761 (GRCh37)
Canonical SPDI:: NC_000011.10:20160214:G:C
Gene:: DBX1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.20160215G>C, NC_000011.9:g.20181761G>C, NM_001029865.4:c.110C>G, NM_001029865.3:c.110C>G, NM_001029865.2:c.110C>G, NP_001025036.2:p.Ser37Cys

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