SNP Links for Gene (Select 120066) - SNP

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Select item 14849873091.

rs1484987309 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:7827158 (GRCh38)
11:7848705 (GRCh37)
Canonical SPDI:: NC_000011.10:7827157:A:G
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000036/5 (GnomAD)
G=0.000038/10 (TOPMED)
HGVS:: NC_000011.10:g.7827158A>G, NC_000011.9:g.7848705A>G, NW_011332695.1:g.58146A>G, NT_187583.1:g.48026A>G

Select item 14849767122.

rs1484976712 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:7825888 (GRCh38)
11:7847435 (GRCh37)
Canonical SPDI:: NC_000011.10:7825887:G:T
Gene:: OR5P3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (GnomAD_exomes)
T=0.000036/5 (GnomAD)
HGVS:: NC_000011.10:g.7825888G>T, NC_000011.9:g.7847435G>T, NW_011332695.1:g.56878G>T, NT_187583.1:g.46756G>T, NM_153445.2:c.85C>A, NM_153445.1:c.85C>A, NP_703146.1:p.Leu29Ile

Select item 14844883423.

rs1484488342 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:7827243 (GRCh38)
11:7848790 (GRCh37)
Canonical SPDI:: NC_000011.10:7827242:C:T
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7827243C>T, NC_000011.9:g.7848790C>T, NW_011332695.1:g.58231C>T, NT_187583.1:g.48111C>T

Select item 14843296674.

rs1484329667 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:7827906 (GRCh38)
11:7849453 (GRCh37)
Canonical SPDI:: NC_000011.10:7827905:T:C
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.7827906T>C, NC_000011.9:g.7849453T>C, NW_011332695.1:g.58894T>C, NT_187583.1:g.48774T>C

Select item 14840658365.

rs1484065836 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:7827583 (GRCh38)
11:7849130 (GRCh37)
Canonical SPDI:: NC_000011.10:7827582:T:C
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7827583T>C, NC_000011.9:g.7849130T>C, NW_011332695.1:g.58571T>C, NT_187583.1:g.48451T>C

Select item 14838786776.

rs1483878677 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 11:7825527 (GRCh38)
11:7847074 (GRCh37)
Canonical SPDI:: NC_000011.10:7825526:T:A,NC_000011.10:7825526:T:C
Gene:: OR5P3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
A=0.000008/2 (GnomAD_exomes)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.7825527T>A, NC_000011.10:g.7825527T>C, NC_000011.9:g.7847074T>A, NC_000011.9:g.7847074T>C, NW_011332695.1:g.56517T>A, NW_011332695.1:g.56517T>C, NT_187583.1:g.46395T>A, NT_187583.1:g.46395T>C, NM_153445.2:c.446A>T, NM_153445.2:c.446A>G, NM_153445.1:c.446A>T, NM_153445.1:c.446A>G, NP_703146.1:p.Tyr149Phe, NP_703146.1:p.Tyr149Cys

Select item 14836901107.

rs1483690110 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:7824646 (GRCh38)
11:7846193 (GRCh37)
Canonical SPDI:: NC_000011.10:7824645:T:C
Gene:: OR5P3 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7824646T>C, NC_000011.9:g.7846193T>C, NW_011332695.1:g.55636T>C, NT_187583.1:g.45514T>C

Select item 14831531438.

rs1483153143 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:7826213 (GRCh38)
11:7847760 (GRCh37)
Canonical SPDI:: NC_000011.10:7826212:A:T
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.0139/62 (ALFA)
HGVS:: NC_000011.10:g.7826213A>T, NC_000011.9:g.7847760A>T, NW_011332695.1:g.57201A>T, NT_187583.1:g.47081A>T

Select item 14824662039.

rs1482466203 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:7827045 (GRCh38)
11:7848592 (GRCh37)
Canonical SPDI:: NC_000011.10:7827044:G:T
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000064/9 (GnomAD)
T=0.000102/27 (TOPMED)
HGVS:: NC_000011.10:g.7827045G>T, NC_000011.9:g.7848592G>T, NW_011332695.1:g.58033G>T, NT_187583.1:g.47913G>T

Select item 147733097210.

rs1477330972 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:7827383 (GRCh38)
11:7848930 (GRCh37)
Canonical SPDI:: NC_000011.10:7827382:T:C
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7827383T>C, NC_000011.9:g.7848930T>C, NW_011332695.1:g.58371T>C, NT_187583.1:g.48251T>C

Select item 147567859211.

rs1475678592 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:7824750 (GRCh38)
11:7846297 (GRCh37)
Canonical SPDI:: NC_000011.10:7824749:A:C,NC_000011.10:7824749:A:G
Gene:: OR5P3 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7824750A>C, NC_000011.10:g.7824750A>G, NC_000011.9:g.7846297A>C, NC_000011.9:g.7846297A>G, NW_011332695.1:g.55740A>C, NW_011332695.1:g.55740A>G, NT_187583.1:g.45618A>C, NT_187583.1:g.45618A>G

Select item 147550766312.

rs1475507663 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:7825543 (GRCh38)
11:7847090 (GRCh37)
Canonical SPDI:: NC_000011.10:7825542:A:G
Gene:: OR5P3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.7825543A>G, NC_000011.9:g.7847090A>G, NW_011332695.1:g.56533A>G, NT_187583.1:g.46411A>G, NM_153445.2:c.430T>C, NM_153445.1:c.430T>C

Select item 147454176713.

rs1474541767 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:7825812 (GRCh38)
11:7847359 (GRCh37)
Canonical SPDI:: NC_000011.10:7825811:T:C,NC_000011.10:7825811:T:G
Gene:: OR5P3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.7825812T>C, NC_000011.10:g.7825812T>G, NC_000011.9:g.7847359T>C, NC_000011.9:g.7847359T>G, NW_011332695.1:g.56802T>C, NW_011332695.1:g.56802T>G, NT_187583.1:g.46680T>C, NT_187583.1:g.46680T>G, NM_153445.2:c.161A>G, NM_153445.2:c.161A>C, NM_153445.1:c.161A>G, NM_153445.1:c.161A>C, NP_703146.1:p.His54Arg, NP_703146.1:p.His54Pro

Select item 147399125614.

rs1473991256 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:7826252 (GRCh38)
11:7847799 (GRCh37)
Canonical SPDI:: NC_000011.10:7826251:T:G
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.7826252T>G, NC_000011.9:g.7847799T>G, NW_011332695.1:g.57240T>G, NT_187583.1:g.47120T>G

Select item 147383421815.

rs1473834218 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:7827700 (GRCh38)
11:7849247 (GRCh37)
Canonical SPDI:: NC_000011.10:7827698:ACA:A
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
-=0.0002/1 (Estonian)
HGVS:: NC_000011.10:g.7827700_7827701del, NC_000011.9:g.7849247_7849248del, NW_011332695.1:g.58688_58689del, NT_187583.1:g.48568_48569del

Select item 147365320616.

rs1473653206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:7827668 (GRCh38)
11:7849215 (GRCh37)
Canonical SPDI:: NC_000011.10:7827667:C:T
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000106/2 (TOMMO)
HGVS:: NC_000011.10:g.7827668C>T, NC_000011.9:g.7849215C>T, NW_011332695.1:g.58656C>T, NT_187583.1:g.48536C>T

Select item 147160725517.

rs1471607255 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTGGGAGTGGGAGTGCAGGTGGGA [Show Flanks]
Chromosome:: 11:7825228 (GRCh38)
11:7846776 (GRCh37)
Canonical SPDI:: NC_000011.10:7825228:GA:GAGTGGGAGTGGGAGTGCAGGTGGGA
Gene:: OR5P3 (Varview)
Functional Consequence:: inframe_insertion,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: GAGTGGGAGTGGGAGTGCAGGTGGGA=0./0 (ALFA)
HGVS:: NC_000011.10:g.7825229_7825230GAGTGG[2]GAGTGCAGGTGGGA[1], NC_000011.9:g.7846776_7846777GAGTGG[2]GAGTGCAGGTGGGA[1], NW_011332695.1:g.56219_56220GAGTGG[2]GAGTGCAGGTGGGA[1], NT_187583.1:g.46097_46098GAGTGG[2]GAGTGCAGGTGGGA[1], NM_153445.2:c.744_745insCCACCTGCACTCCCACTCCCACTC, NM_153445.1:c.744_745insCCACCTGCACTCCCACTCCCACTC, NP_703146.1:p.Thr249_Leu250insProProAlaLeuProLeuProLeu

Select item 146904839818.

rs1469048398 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:7825864 (GRCh38)
11:7847411 (GRCh37)
Canonical SPDI:: NC_000011.10:7825863:C:A,NC_000011.10:7825863:C:T
Gene:: OR5P3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.7825864C>A, NC_000011.10:g.7825864C>T, NC_000011.9:g.7847411C>A, NC_000011.9:g.7847411C>T, NW_011332695.1:g.56854C>A, NW_011332695.1:g.56854C>T, NT_187583.1:g.46732C>A, NT_187583.1:g.46732C>T, NM_153445.2:c.109G>T, NM_153445.2:c.109G>A, NM_153445.1:c.109G>T, NM_153445.1:c.109G>A, NP_703146.1:p.Val37Phe, NP_703146.1:p.Val37Ile

Select item 146883980219.

rs1468839802 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:7825035 (GRCh38)
11:7846582 (GRCh37)
Canonical SPDI:: NC_000011.10:7825034:C:T
Gene:: OR5P3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.7825035C>T, NC_000011.9:g.7846582C>T, NW_011332695.1:g.56025C>T, NT_187583.1:g.45903C>T, NM_153445.2:c.*2G>A

Select item 146880028420.

rs1468800284 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:7826024 (GRCh38)
11:7847571 (GRCh37)
Canonical SPDI:: NC_000011.10:7826023:G:T
Gene:: OR5P3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.7826024G>T, NC_000011.9:g.7847571G>T, NW_011332695.1:g.57014G>T, NT_187583.1:g.46892G>T