SNP Links for Gene (Select 119392) - SNP

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Items: 1 to 20 of 1736

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Select item 14905701201.

rs1490570120 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:104122810 (GRCh38)
10:105882568 (GRCh37)
Canonical SPDI:: NC_000010.11:104122809:T:C
Gene:: SFR1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104122810T>C, NC_000010.10:g.105882568T>C, XM_005269521.4:c.45T>C, XM_005269521.3:c.45T>C, XM_005269521.2:c.45T>C, XM_005269521.1:c.45T>C

Select item 14903106372.

rs1490310637 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 10:104126604 (GRCh38)
10:105886362 (GRCh37)
Canonical SPDI:: NC_000010.11:104126603:C:A
Gene:: SFR1 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.104126604C>A, NC_000010.10:g.105886362C>A

Select item 14892667233.

rs1489266723 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:104125069 (GRCh38)
10:105884827 (GRCh37)
Canonical SPDI:: NC_000010.11:104125068:C:G
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.104125069C>G, NC_000010.10:g.105884827C>G

Select item 14891957144.

rs1489195714 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:104126180 (GRCh38)
10:105885938 (GRCh37)
Canonical SPDI:: NC_000010.11:104126179:G:A,NC_000010.11:104126179:G:C
Gene:: SFR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.104126180G>A, NC_000010.11:g.104126180G>C, NC_000010.10:g.105885938G>A, NC_000010.10:g.105885938G>C, NM_145247.5:c.*476G>A, NM_145247.5:c.*476G>C, NM_145247.4:c.*476G>A, NM_145247.4:c.*476G>C, XM_005269521.4:c.*476G>A, XM_005269521.4:c.*476G>C, XM_005269521.3:c.*476G>A, XM_005269521.3:c.*476G>C, XM_005269521.2:c.*476G>A, XM_005269521.2:c.*476G>C, XM_005269521.1:c.*476G>A, XM_005269521.1:c.*476G>C, NM_001002759.2:c.*476G>A, NM_001002759.2:c.*476G>C, NM_001002759.1:c.*476G>A, NM_001002759.1:c.*476G>C, XM_047424579.1:c.*476G>A, XM_047424579.1:c.*476G>C, NM_001384830.1:c.*476G>A, NM_001384830.1:c.*476G>C, NM_001384829.1:c.*476G>A, NM_001384829.1:c.*476G>C

Select item 14885037935.

rs1488503793 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 10:104124953 (GRCh38)
10:105884711 (GRCh37)
Canonical SPDI:: NC_000010.11:104124952:C:A,NC_000010.11:104124952:C:T
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104124953C>A, NC_000010.11:g.104124953C>T, NC_000010.10:g.105884711C>A, NC_000010.10:g.105884711C>T

Select item 14872371956.

rs1487237195 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:104125229 (GRCh38)
10:105884987 (GRCh37)
Canonical SPDI:: NC_000010.11:104125228:G:A,NC_000010.11:104125228:G:C
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.104125229G>A, NC_000010.11:g.104125229G>C, NC_000010.10:g.105884987G>A, NC_000010.10:g.105884987G>C

Select item 14872247527.

rs1487224752 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:104120141 (GRCh38)
10:105879899 (GRCh37)
Canonical SPDI:: NC_000010.11:104120140:T:C
Gene:: SFR1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.104120141T>C, NC_000010.10:g.105879899T>C

Select item 14867145488.

rs1486714548 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 10:104122535 (GRCh38)
10:105882294 (GRCh37)
Canonical SPDI:: NC_000010.11:104122535:T:TT
Gene:: SFR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.104122536dup, NC_000010.10:g.105882294dup, XM_005269521.4:c.-230dup, XM_005269521.3:c.-230dup, XM_005269521.2:c.-230dup, XM_047424579.1:c.-230dup

Select item 14865013769.

rs1486501376 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 10:104120984 (GRCh38)
10:105880742 (GRCh37)
Canonical SPDI:: NC_000010.11:104120983:AAA:AA
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AA=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104120986del, NC_000010.10:g.105880744del

Select item 148647277110.

rs1486472771 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:104122627 (GRCh38)
10:105882385 (GRCh37)
Canonical SPDI:: NC_000010.11:104122626:C:T
Gene:: SFR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104122627C>T, NC_000010.10:g.105882385C>T, XM_005269521.4:c.-139C>T, XM_005269521.3:c.-139C>T, XM_005269521.2:c.-139C>T, XM_047424579.1:c.-139C>T

Select item 148608805611.

rs1486088056 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:104121749 (GRCh38)
10:105881507 (GRCh37)
Canonical SPDI:: NC_000010.11:104121748:A:G
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.104121749A>G, NC_000010.10:g.105881507A>G

Select item 148569498612.

rs1485694986 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:104126203 (GRCh38)
10:105885961 (GRCh37)
Canonical SPDI:: NC_000010.11:104126202:A:G
Gene:: SFR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.104126203A>G, NC_000010.10:g.105885961A>G, NM_145247.5:c.*499A>G, NM_145247.4:c.*499A>G, XM_005269521.4:c.*499A>G, XM_005269521.3:c.*499A>G, XM_005269521.2:c.*499A>G, XM_005269521.1:c.*499A>G, NM_001002759.2:c.*499A>G, NM_001002759.1:c.*499A>G, XM_047424579.1:c.*499A>G, NM_001384830.1:c.*499A>G, NM_001384829.1:c.*499A>G

Select item 148503920813.

rs1485039208 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:104122234 (GRCh38)
10:105881992 (GRCh37)
Canonical SPDI:: NC_000010.11:104122233:G:A
Gene:: SFR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
HGVS:: NC_000010.11:g.104122234G>A, NC_000010.10:g.105881992G>A, XM_047424579.1:c.-532G>A, NM_001384829.1:c.-75G>A

Select item 148445125714.

rs1484451257 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:104120925 (GRCh38)
10:105880683 (GRCh37)
Canonical SPDI:: NC_000010.11:104120924:G:A,NC_000010.11:104120924:G:C
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.104120925G>A, NC_000010.11:g.104120925G>C, NC_000010.10:g.105880683G>A, NC_000010.10:g.105880683G>C

Select item 148442246815.

rs1484422468 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 10:104125835 (GRCh38)
10:105885593 (GRCh37)
Canonical SPDI:: NC_000010.11:104125834:G:A,NC_000010.11:104125834:G:T
Gene:: SFR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104125835G>A, NC_000010.11:g.104125835G>T, NC_000010.10:g.105885593G>A, NC_000010.10:g.105885593G>T, NM_145247.5:c.*131G>A, NM_145247.5:c.*131G>T, NM_145247.4:c.*131G>A, NM_145247.4:c.*131G>T, XM_005269521.4:c.*131G>A, XM_005269521.4:c.*131G>T, XM_005269521.3:c.*131G>A, XM_005269521.3:c.*131G>T, XM_005269521.2:c.*131G>A, XM_005269521.2:c.*131G>T, XM_005269521.1:c.*131G>A, XM_005269521.1:c.*131G>T, NM_001002759.2:c.*131G>A, NM_001002759.2:c.*131G>T, NM_001002759.1:c.*131G>A, NM_001002759.1:c.*131G>T, XM_047424579.1:c.*131G>A, XM_047424579.1:c.*131G>T, NM_001384830.1:c.*131G>A, NM_001384830.1:c.*131G>T, NM_001384829.1:c.*131G>A, NM_001384829.1:c.*131G>T

Select item 148438922916.

rs1484389229 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:104121900 (GRCh38)
10:105881658 (GRCh37)
Canonical SPDI:: NC_000010.11:104121899:C:G
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.104121900C>G, NC_000010.10:g.105881658C>G

Select item 148437351617.

rs1484373516 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:104123108 (GRCh38)
10:105882866 (GRCh37)
Canonical SPDI:: NC_000010.11:104123107:C:T
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000015/3 (GnomAD_exomes)
HGVS:: NC_000010.11:g.104123108C>T, NC_000010.10:g.105882866C>T

Select item 148405510018.

rs1484055100 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:104120606 (GRCh38)
10:105880364 (GRCh37)
Canonical SPDI:: NC_000010.11:104120605:T:C
Gene:: SFR1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.104120606T>C, NC_000010.10:g.105880364T>C

Select item 148402179319.

rs1484021793 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:104122755 (GRCh38)
10:105882513 (GRCh37)
Canonical SPDI:: NC_000010.11:104122754:G:A
Gene:: SFR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.104122755G>A, NC_000010.10:g.105882513G>A, XM_005269521.4:c.-11G>A, XM_005269521.3:c.-11G>A, XM_005269521.2:c.-11G>A, XM_047424579.1:c.-11G>A

Select item 148337718420.

rs1483377184 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:104122223 (GRCh38)
10:105881981 (GRCh37)
Canonical SPDI:: NC_000010.11:104122222:C:G,NC_000010.11:104122222:C:T
Gene:: SFR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000010.11:g.104122223C>G, NC_000010.11:g.104122223C>T, NC_000010.10:g.105881981C>G, NC_000010.10:g.105881981C>T, XM_047424579.1:c.-543C>G, XM_047424579.1:c.-543C>T, NM_001384829.1:c.-86C>G, NM_001384829.1:c.-86C>T

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