SNP Links for Gene (Select 115362) - SNP

Links from Gene

Items: 1 to 20 of 3883

<< First< Prev

Page of 195

Next >Last >>

Select item 14915876241.

rs1491587624 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:89265727 (GRCh38)
1:89731410 (GRCh37)
Canonical SPDI:: NC_000001.11:89265726:CA:
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.06365/755 (ALFA)
-=0.00415/120 (GnomAD)
-=0.00452/127 (TOMMO)
HGVS:: NC_000001.11:g.89265727_89265728del, NC_000001.10:g.89731410_89731411del, NG_027112.2:g.28404_28405del, NG_052816.1:g.12134_12135del

Select item 14914903912.

rs1491490391 has merged into rs565298261 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 1:89274252 (GRCh38)
1:89739935 (GRCh37)
Canonical SPDI:: NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
Gene:: GBP5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.0584/32 (NorthernSweden)
-=0.221/1107 (1000Genomes)
HGVS:: NC_000001.11:g.89274252_89274256del, NC_000001.11:g.89274253_89274256del, NC_000001.11:g.89274254_89274256del, NC_000001.11:g.89274255_89274256del, NC_000001.11:g.89274256del, NC_000001.11:g.89274256dup, NC_000001.11:g.89274255_89274256dup, NC_000001.11:g.89274254_89274256dup, NC_000001.11:g.89274253_89274256dup, NC_000001.11:g.89274252_89274256dup, NC_000001.11:g.89274251_89274256dup, NC_000001.10:g.89739935_89739939del, NC_000001.10:g.89739936_89739939del, NC_000001.10:g.89739937_89739939del, NC_000001.10:g.89739938_89739939del, NC_000001.10:g.89739939del, NC_000001.10:g.89739939dup, NC_000001.10:g.89739938_89739939dup, NC_000001.10:g.89739937_89739939dup, NC_000001.10:g.89739936_89739939dup, NC_000001.10:g.89739935_89739939dup, NC_000001.10:g.89739934_89739939dup, NG_027112.2:g.36929_36933del, NG_027112.2:g.36930_36933del, NG_027112.2:g.36931_36933del, NG_027112.2:g.36932_36933del, NG_027112.2:g.36933del, NG_027112.2:g.36933dup, NG_027112.2:g.36932_36933dup, NG_027112.2:g.36931_36933dup, NG_027112.2:g.36930_36933dup, NG_027112.2:g.36929_36933dup, NG_027112.2:g.36928_36933dup, NG_052816.1:g.3618_3622del, NG_052816.1:g.3619_3622del, NG_052816.1:g.3620_3622del, NG_052816.1:g.3621_3622del, NG_052816.1:g.3622del, NG_052816.1:g.3622dup, NG_052816.1:g.3621_3622dup, NG_052816.1:g.3620_3622dup, NG_052816.1:g.3619_3622dup, NG_052816.1:g.3618_3622dup, NG_052816.1:g.3617_3622dup

Select item 14914535463.

rs1491453546 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:89274239 (GRCh38)
1:89739922 (GRCh37)
Canonical SPDI:: NC_000001.11:89274238:CA:
Gene:: GBP5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.89274239_89274240del, NC_000001.10:g.89739922_89739923del, NG_027112.2:g.36916_36917del, NG_052816.1:g.3622_3623del

Select item 14907432024.

rs1490743202 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:89265192 (GRCh38)
1:89730875 (GRCh37)
Canonical SPDI:: NC_000001.11:89265191:G:A
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.89265192G>A, NC_000001.10:g.89730875G>A, NG_027112.2:g.27869G>A, NG_052816.1:g.12670C>T

Select item 14906316365.

rs1490631636 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:89264683 (GRCh38)
1:89730366 (GRCh37)
Canonical SPDI:: NC_000001.11:89264682:C:T
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.89264683C>T, NC_000001.10:g.89730366C>T, NG_027112.2:g.27360C>T, NG_052816.1:g.13179G>A

Select item 14905806776.

rs1490580677 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:89265700 (GRCh38)
1:89731383 (GRCh37)
Canonical SPDI:: NC_000001.11:89265699:C:T
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.89265700C>T, NC_000001.10:g.89731383C>T, NG_027112.2:g.28377C>T, NG_052816.1:g.12162G>A

Select item 14904750767.

rs1490475076 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:89272690 (GRCh38)
1:89738373 (GRCh37)
Canonical SPDI:: NC_000001.11:89272689:G:T
Gene:: GBP5 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.89272690G>T, NC_000001.10:g.89738373G>T, NG_027112.2:g.35367G>T, NG_052816.1:g.5172C>A, NM_052942.5:c.-366C>A, NM_052942.4:c.-366C>A, NM_052942.3:c.-366C>A, NM_001134486.4:c.-258C>A, NM_001134486.3:c.-258C>A, NM_001134486.2:c.-258C>A, NM_001391920.1:c.-366C>A

Select item 14904575178.

rs1490457517 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:89273524 (GRCh38)
1:89739207 (GRCh37)
Canonical SPDI:: NC_000001.11:89273523:C:A,NC_000001.11:89273523:C:T
Gene:: GBP5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.89273524C>A, NC_000001.11:g.89273524C>T, NC_000001.10:g.89739207C>A, NC_000001.10:g.89739207C>T, NG_027112.2:g.36201C>A, NG_027112.2:g.36201C>T, NG_052816.1:g.4338G>T, NG_052816.1:g.4338G>A

Select item 14903976949.

rs1490397694 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:89262427 (GRCh38)
1:89728110 (GRCh37)
Canonical SPDI:: NC_000001.11:89262426:T:C
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.89262427T>C, NC_000001.10:g.89728110T>C, NG_027112.2:g.25104T>C, NG_052816.1:g.15435A>G

Select item 149028661510.

rs1490286615 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:89262564 (GRCh38)
1:89728247 (GRCh37)
Canonical SPDI:: NC_000001.11:89262563:G:A
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.89262564G>A, NC_000001.10:g.89728247G>A, NG_027112.2:g.25241G>A, NG_052816.1:g.15298C>T

Select item 148998393111.

rs1489983931 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:89272276 (GRCh38)
1:89737959 (GRCh37)
Canonical SPDI:: NC_000001.11:89272275:G:C
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.89272276G>C, NC_000001.10:g.89737959G>C, NG_027112.2:g.34953G>C, NG_052816.1:g.5586C>G

Select item 148963152212.

rs1489631522 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:89271074 (GRCh38)
1:89736757 (GRCh37)
Canonical SPDI:: NC_000001.11:89271073:C:G
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.89271074C>G, NC_000001.10:g.89736757C>G, NG_027112.2:g.33751C>G, NG_052816.1:g.6788G>C

Select item 148952603613.

rs1489526036 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:89271220 (GRCh38)
1:89736903 (GRCh37)
Canonical SPDI:: NC_000001.11:89271219:A:G
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.89271220A>G, NC_000001.10:g.89736903A>G, NG_027112.2:g.33897A>G, NG_052816.1:g.6642T>C

Select item 148909645714.

rs1489096457 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 1:89263516 (GRCh38)
1:89729199 (GRCh37)
Canonical SPDI:: NC_000001.11:89263515:A:C,NC_000001.11:89263515:A:G,NC_000001.11:89263515:A:T
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.89263516A>C, NC_000001.11:g.89263516A>G, NC_000001.11:g.89263516A>T, NC_000001.10:g.89729199A>C, NC_000001.10:g.89729199A>G, NC_000001.10:g.89729199A>T, NG_027112.2:g.26193A>C, NG_027112.2:g.26193A>G, NG_027112.2:g.26193A>T, NG_052816.1:g.14346T>G, NG_052816.1:g.14346T>C, NG_052816.1:g.14346T>A

Select item 148908940415.

rs1489089404 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:89260152 (GRCh38)
1:89725836 (GRCh37)
Canonical SPDI:: NC_000001.11:89260152:C:CC
Gene:: GBP5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.003333/2 (NorthernSweden)
HGVS:: NC_000001.11:g.89260153dup, NC_000001.10:g.89725836dup, NG_027112.2:g.22830dup, NG_052816.1:g.17709dup, NM_052942.5:c.*551dup, NM_052942.4:c.*551dup, NM_052942.3:c.*551dup, NM_001134486.4:c.*551dup, NM_001134486.3:c.*551dup, NM_001134486.2:c.*551dup, NM_001391920.1:c.*551dup

Select item 148880828716.

rs1488808287 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>- [Show Flanks]
Chromosome:: 1:89266691 (GRCh38)
1:89732374 (GRCh37)
Canonical SPDI:: NC_000001.11:89266688:ATATAT:AT
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.89266689AT[1], NC_000001.10:g.89732372AT[1], NG_027112.2:g.29366AT[1], NG_052816.1:g.11168AT[1]

Select item 148863481917.

rs1488634819 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:89272458 (GRCh38)
1:89738141 (GRCh37)
Canonical SPDI:: NC_000001.11:89272457:C:T
Gene:: GBP5 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.89272458C>T, NC_000001.10:g.89738141C>T, NG_027112.2:g.35135C>T, NG_052816.1:g.5404G>A, NM_052942.5:c.-134G>A, NM_052942.4:c.-134G>A, NM_052942.3:c.-134G>A, NM_001134486.4:c.-26G>A, NM_001134486.3:c.-26G>A, NM_001134486.2:c.-26G>A, NM_001391920.1:c.-134G>A

Select item 148863416418.

rs1488634164 has merged into rs565298261 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 1:89274252 (GRCh38)
1:89739935 (GRCh37)
Canonical SPDI:: NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:89274239:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
Gene:: GBP5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.0584/32 (NorthernSweden)
-=0.221/1107 (1000Genomes)
HGVS:: NC_000001.11:g.89274252_89274256del, NC_000001.11:g.89274253_89274256del, NC_000001.11:g.89274254_89274256del, NC_000001.11:g.89274255_89274256del, NC_000001.11:g.89274256del, NC_000001.11:g.89274256dup, NC_000001.11:g.89274255_89274256dup, NC_000001.11:g.89274254_89274256dup, NC_000001.11:g.89274253_89274256dup, NC_000001.11:g.89274252_89274256dup, NC_000001.11:g.89274251_89274256dup, NC_000001.10:g.89739935_89739939del, NC_000001.10:g.89739936_89739939del, NC_000001.10:g.89739937_89739939del, NC_000001.10:g.89739938_89739939del, NC_000001.10:g.89739939del, NC_000001.10:g.89739939dup, NC_000001.10:g.89739938_89739939dup, NC_000001.10:g.89739937_89739939dup, NC_000001.10:g.89739936_89739939dup, NC_000001.10:g.89739935_89739939dup, NC_000001.10:g.89739934_89739939dup, NG_027112.2:g.36929_36933del, NG_027112.2:g.36930_36933del, NG_027112.2:g.36931_36933del, NG_027112.2:g.36932_36933del, NG_027112.2:g.36933del, NG_027112.2:g.36933dup, NG_027112.2:g.36932_36933dup, NG_027112.2:g.36931_36933dup, NG_027112.2:g.36930_36933dup, NG_027112.2:g.36929_36933dup, NG_027112.2:g.36928_36933dup, NG_052816.1:g.3618_3622del, NG_052816.1:g.3619_3622del, NG_052816.1:g.3620_3622del, NG_052816.1:g.3621_3622del, NG_052816.1:g.3622del, NG_052816.1:g.3622dup, NG_052816.1:g.3621_3622dup, NG_052816.1:g.3620_3622dup, NG_052816.1:g.3619_3622dup, NG_052816.1:g.3618_3622dup, NG_052816.1:g.3617_3622dup

Select item 148849254919.

rs1488492549 [Homo sapiens]

Variant type:: SNV:
Alleles:: >
Chromosome:: no mapping
Canonical SPDI:

Select item 148840696120.

rs1488406961 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:89261305 (GRCh38)
1:89726988 (GRCh37)
Canonical SPDI:: NC_000001.11:89261304:T:C
Gene:: GBP5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.89261305T>C, NC_000001.10:g.89726988T>C, NG_027112.2:g.23982T>C, NG_052816.1:g.16557A>G

<< First< Prev

Page of 195

Next >Last >>

dbSNP

Result Filters

Clinical Significance

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 3883

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity