SNP Links for Gene (Select 10933) - SNP

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Select item 14915863071.

rs1491586307 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AG,TG [Show Flanks]
Chromosome:: 15:78872736 (GRCh38)
15:79165079 (GRCh37)
Canonical SPDI:: NC_000015.10:78872736:G:GAG,NC_000015.10:78872736:G:GTG
Gene:: MORF4L1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTG=0./0 (ALFA)
GT=0.000008/2 (TOPMED)
GA=0.000043/1 (GnomAD)
HGVS:: NC_000015.10:g.78872737_78872738insAG, NC_000015.10:g.78872737_78872738insTG, NC_000015.9:g.79165079_79165080insAG, NC_000015.9:g.79165079_79165080insTG

Select item 14915524372.

rs1491552437 [Homo sapiens]

Variant type:: DEL
Alleles:: CG>- [Show Flanks]
Chromosome:: 15:78872735 (GRCh38)
15:79165077 (GRCh37)
Canonical SPDI:: NC_000015.10:78872734:CG:
Gene:: MORF4L1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000401/6 (TOMMO)
HGVS:: NC_000015.10:g.78872735_78872736del, NC_000015.9:g.79165077_79165078del

Select item 14915357943.

rs1491535794 has merged into rs10592452 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,AA,AAA,AAAA,AAAAAA [Show Flanks]
Chromosome:: 15:78875795 (GRCh38)
15:79168137 (GRCh37)
Canonical SPDI:: NC_000015.10:78875785:AAAAAAAAAAAAAA:AAAAAAAAA,NC_000015.10:78875785:AAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000015.10:78875785:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:78875785:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:78875785:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
AA=0./0 (ALSPAC)
AA=0./0 (TWINSUK)
AA=0.0717/359 (1000Genomes)
HGVS:: NC_000015.10:g.78875795_78875799del, NC_000015.10:g.78875797_78875799del, NC_000015.10:g.78875798_78875799del, NC_000015.10:g.78875799del, NC_000015.10:g.78875799dup, NC_000015.9:g.79168137_79168141del, NC_000015.9:g.79168139_79168141del, NC_000015.9:g.79168140_79168141del, NC_000015.9:g.79168141del, NC_000015.9:g.79168141dup

Select item 14914946584.

rs1491494658 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 15:78879034 (GRCh38)
15:79171376 (GRCh37)
Canonical SPDI:: NC_000015.10:78879033:CT:
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000015/2 (GnomAD)
HGVS:: NC_000015.10:g.78879034_78879035del, NC_000015.9:g.79171376_79171377del

Select item 14914519565.

rs1491451956 has merged into rs570514618 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTT>-,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 15:78881199 (GRCh38)
15:79173541 (GRCh37)
Canonical SPDI:: NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78881189:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000015.10:g.78881199_78881208del, NC_000015.10:g.78881202_78881208del, NC_000015.10:g.78881203_78881208del, NC_000015.10:g.78881204_78881208del, NC_000015.10:g.78881205_78881208del, NC_000015.10:g.78881206_78881208del, NC_000015.10:g.78881207_78881208del, NC_000015.10:g.78881208del, NC_000015.10:g.78881208dup, NC_000015.10:g.78881207_78881208dup, NC_000015.10:g.78881206_78881208dup, NC_000015.10:g.78881205_78881208dup, NC_000015.10:g.78881204_78881208dup, NC_000015.10:g.78881203_78881208dup, NC_000015.10:g.78881202_78881208dup, NC_000015.10:g.78881201_78881208dup, NC_000015.10:g.78881200_78881208dup, NC_000015.10:g.78881199_78881208dup, NC_000015.10:g.78881198_78881208dup, NC_000015.10:g.78881197_78881208dup, NC_000015.10:g.78881196_78881208dup, NC_000015.10:g.78881195_78881208dup, NC_000015.10:g.78881194_78881208dup, NC_000015.10:g.78881193_78881208dup, NC_000015.10:g.78881192_78881208dup, NC_000015.10:g.78881191_78881208dup, NC_000015.10:g.78881190_78881208dup, NC_000015.10:g.78881208_78881209insTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78881208_78881209insTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78881208_78881209insTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78881208_78881209insTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78881208_78881209insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79173541_79173550del, NC_000015.9:g.79173544_79173550del, NC_000015.9:g.79173545_79173550del, NC_000015.9:g.79173546_79173550del, NC_000015.9:g.79173547_79173550del, NC_000015.9:g.79173548_79173550del, NC_000015.9:g.79173549_79173550del, NC_000015.9:g.79173550del, NC_000015.9:g.79173550dup, NC_000015.9:g.79173549_79173550dup, NC_000015.9:g.79173548_79173550dup, NC_000015.9:g.79173547_79173550dup, NC_000015.9:g.79173546_79173550dup, NC_000015.9:g.79173545_79173550dup, NC_000015.9:g.79173544_79173550dup, NC_000015.9:g.79173543_79173550dup, NC_000015.9:g.79173542_79173550dup, NC_000015.9:g.79173541_79173550dup, NC_000015.9:g.79173540_79173550dup, NC_000015.9:g.79173539_79173550dup, NC_000015.9:g.79173538_79173550dup, NC_000015.9:g.79173537_79173550dup, NC_000015.9:g.79173536_79173550dup, NC_000015.9:g.79173535_79173550dup, NC_000015.9:g.79173534_79173550dup, NC_000015.9:g.79173533_79173550dup, NC_000015.9:g.79173532_79173550dup, NC_000015.9:g.79173550_79173551insTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79173550_79173551insTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79173550_79173551insTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79173550_79173551insTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79173550_79173551insTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14914353936.

rs1491435393 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->CTTTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14914225857.

rs1491422585 has merged into rs61343587 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAAAAAAA [Show Flanks]
Chromosome:: 15:78886967 (GRCh38)
15:79179309 (GRCh37)
Canonical SPDI:: NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:78886954:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
-=0.1066/411 (ALSPAC)
A=0.3158/12 (GENOME_DK)
A=0.3444/1725 (1000Genomes)
HGVS:: NC_000015.10:g.78886967_78886971del, NC_000015.10:g.78886968_78886971del, NC_000015.10:g.78886969_78886971del, NC_000015.10:g.78886970_78886971del, NC_000015.10:g.78886971del, NC_000015.10:g.78886971dup, NC_000015.10:g.78886970_78886971dup, NC_000015.10:g.78886964_78886971dup, NC_000015.9:g.79179309_79179313del, NC_000015.9:g.79179310_79179313del, NC_000015.9:g.79179311_79179313del, NC_000015.9:g.79179312_79179313del, NC_000015.9:g.79179313del, NC_000015.9:g.79179313dup, NC_000015.9:g.79179312_79179313dup, NC_000015.9:g.79179306_79179313dup

Select item 14914076548.

rs1491407654 has merged into rs200956078 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>-,CTCTCT [Show Flanks]
Chromosome:: 15:78894443 (GRCh38)
15:79186785 (GRCh37)
Canonical SPDI:: NC_000015.10:78894439:TCTCT:TCT,NC_000015.10:78894439:TCTCT:TCTCTCTCT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCT=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.78894441CT[1], NC_000015.10:g.78894441CT[4], NC_000015.9:g.79186783CT[1], NC_000015.9:g.79186783CT[4]

Select item 14913856119.

rs1491385611 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTTT [Show Flanks]
Chromosome:: 15:78896309 (GRCh38)
15:79188652 (GRCh37)
Canonical SPDI:: NC_000015.10:78896309:TTT:TTTCTTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTTCTTT=0./0 (ALFA)
HGVS:: NC_000015.10:g.78896312_78896313insCTTT, NC_000015.9:g.79188654_79188655insCTTT

Select item 149136751310.

rs1491367513 [Homo sapiens]

Variant type:: INS
Alleles:: ->GTCT [Show Flanks]
Chromosome:: 15:78894436 (GRCh38)
15:79186779 (GRCh37)
Canonical SPDI:: NC_000015.10:78894436::GTCT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GTCT=0./0 (ALFA)
HGVS:: NC_000015.10:g.78894436_78894437insGTCT, NC_000015.9:g.79186778_79186779insGTCT

Select item 149132749611.

rs1491327496 has merged into rs748522540 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGGGGGGGGGG>-,G,GGGGG,GGGGGG,GGGGGGG,GGGGGGGG,GGGGGGGGG,GGGGGGGGGG,GGGGGGGGGGGG,GGGGGGGGGGGGG,GGGGGGGGGGGGGG,GGGGGGGGGGGGGGG,GGGGGGGGGGGGGGGG [Show Flanks]
Chromosome:: 15:78872741 (GRCh38)
15:79165083 (GRCh37)
Canonical SPDI:: NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGGGGGGG,NC_000015.10:78872735:GGGGGGGGGGGGGGGG:GGGGGGGGGGGGGGGGGGGGG
Gene:: MORF4L1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGG=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.78872741_78872751del, NC_000015.10:g.78872742_78872751del, NC_000015.10:g.78872746_78872751del, NC_000015.10:g.78872747_78872751del, NC_000015.10:g.78872748_78872751del, NC_000015.10:g.78872749_78872751del, NC_000015.10:g.78872750_78872751del, NC_000015.10:g.78872751del, NC_000015.10:g.78872751dup, NC_000015.10:g.78872750_78872751dup, NC_000015.10:g.78872749_78872751dup, NC_000015.10:g.78872748_78872751dup, NC_000015.10:g.78872747_78872751dup, NC_000015.9:g.79165083_79165093del, NC_000015.9:g.79165084_79165093del, NC_000015.9:g.79165088_79165093del, NC_000015.9:g.79165089_79165093del, NC_000015.9:g.79165090_79165093del, NC_000015.9:g.79165091_79165093del, NC_000015.9:g.79165092_79165093del, NC_000015.9:g.79165093del, NC_000015.9:g.79165093dup, NC_000015.9:g.79165092_79165093dup, NC_000015.9:g.79165091_79165093dup, NC_000015.9:g.79165090_79165093dup, NC_000015.9:g.79165089_79165093dup

Select item 149129313412.

rs1491293134 [Homo sapiens]

Variant type:: SNV:
Alleles:: CC>-
Chromosome:: no mapping
Canonical SPDI:

Select item 149127614813.

rs1491276148 has merged into rs71148578 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 15:78896316 (GRCh38)
15:79188658 (GRCh37)
Canonical SPDI:: NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:78896308:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000015.10:g.78896316_78896331del, NC_000015.10:g.78896317_78896331del, NC_000015.10:g.78896318_78896331del, NC_000015.10:g.78896319_78896331del, NC_000015.10:g.78896320_78896331del, NC_000015.10:g.78896321_78896331del, NC_000015.10:g.78896322_78896331del, NC_000015.10:g.78896323_78896331del, NC_000015.10:g.78896324_78896331del, NC_000015.10:g.78896325_78896331del, NC_000015.10:g.78896326_78896331del, NC_000015.10:g.78896327_78896331del, NC_000015.10:g.78896328_78896331del, NC_000015.10:g.78896329_78896331del, NC_000015.10:g.78896330_78896331del, NC_000015.10:g.78896331del, NC_000015.10:g.78896331dup, NC_000015.10:g.78896330_78896331dup, NC_000015.10:g.78896329_78896331dup, NC_000015.10:g.78896328_78896331dup, NC_000015.10:g.78896327_78896331dup, NC_000015.10:g.78896326_78896331dup, NC_000015.10:g.78896325_78896331dup, NC_000015.10:g.78896324_78896331dup, NC_000015.10:g.78896323_78896331dup, NC_000015.10:g.78896322_78896331dup, NC_000015.10:g.78896321_78896331dup, NC_000015.10:g.78896320_78896331dup, NC_000015.10:g.78896319_78896331dup, NC_000015.10:g.78896318_78896331dup, NC_000015.10:g.78896317_78896331dup, NC_000015.10:g.78896316_78896331dup, NC_000015.10:g.78896315_78896331dup, NC_000015.10:g.78896314_78896331dup, NC_000015.10:g.78896313_78896331dup, NC_000015.10:g.78896312_78896331dup, NC_000015.10:g.78896311_78896331dup, NC_000015.10:g.78896309_78896331dup, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.10:g.78896331_78896332insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188658_79188673del, NC_000015.9:g.79188659_79188673del, NC_000015.9:g.79188660_79188673del, NC_000015.9:g.79188661_79188673del, NC_000015.9:g.79188662_79188673del, NC_000015.9:g.79188663_79188673del, NC_000015.9:g.79188664_79188673del, NC_000015.9:g.79188665_79188673del, NC_000015.9:g.79188666_79188673del, NC_000015.9:g.79188667_79188673del, NC_000015.9:g.79188668_79188673del, NC_000015.9:g.79188669_79188673del, NC_000015.9:g.79188670_79188673del, NC_000015.9:g.79188671_79188673del, NC_000015.9:g.79188672_79188673del, NC_000015.9:g.79188673del, NC_000015.9:g.79188673dup, NC_000015.9:g.79188672_79188673dup, NC_000015.9:g.79188671_79188673dup, NC_000015.9:g.79188670_79188673dup, NC_000015.9:g.79188669_79188673dup, NC_000015.9:g.79188668_79188673dup, NC_000015.9:g.79188667_79188673dup, NC_000015.9:g.79188666_79188673dup, NC_000015.9:g.79188665_79188673dup, NC_000015.9:g.79188664_79188673dup, NC_000015.9:g.79188663_79188673dup, NC_000015.9:g.79188662_79188673dup, NC_000015.9:g.79188661_79188673dup, NC_000015.9:g.79188660_79188673dup, NC_000015.9:g.79188659_79188673dup, NC_000015.9:g.79188658_79188673dup, NC_000015.9:g.79188657_79188673dup, NC_000015.9:g.79188656_79188673dup, NC_000015.9:g.79188655_79188673dup, NC_000015.9:g.79188654_79188673dup, NC_000015.9:g.79188653_79188673dup, NC_000015.9:g.79188651_79188673dup, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.79188673_79188674insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149122509214.

rs1491225092 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTT [Show Flanks]
Chromosome:: 15:78874584 (GRCh38)
15:79166927 (GRCh37)
Canonical SPDI:: NC_000015.10:78874584:TT:TTCTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTCTT=0./0 (ALFA)
TTC=0.00418/3 (GnomAD)
HGVS:: NC_000015.10:g.78874586_78874587insCTT, NC_000015.9:g.79166928_79166929insCTT

Select item 149122201615.

rs1491222016 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 15:78894437 (GRCh38)
15:79186779 (GRCh37)
Canonical SPDI:: NC_000015.10:78894435:ACA:A
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: -=0.00001/1 (GnomAD)
HGVS:: NC_000015.10:g.78894437_78894438del, NC_000015.9:g.79186779_79186780del

Select item 149118376316.

rs1491183763 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 15:78890383 (GRCh38)
15:79182725 (GRCh37)
Canonical SPDI:: NC_000015.10:78890382:CT:
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000036/5 (GnomAD)
HGVS:: NC_000015.10:g.78890383_78890384del, NC_000015.9:g.79182725_79182726del

Select item 149112128717.

rs1491121287 [Homo sapiens]

Variant type:: DEL
Alleles:: GT>- [Show Flanks]
Chromosome:: 15:78894439 (GRCh38)
15:79186781 (GRCh37)
Canonical SPDI:: NC_000015.10:78894438:GT:
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000015.10:g.78894439_78894440del, NC_000015.9:g.79186781_79186782del

Select item 149103956018.

rs1491039560 has merged into rs67358795 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT [Show Flanks]
Chromosome:: 15:78880880 (GRCh38)
15:79173222 (GRCh37)
Canonical SPDI:: NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:78880869:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.4369/2188 (1000Genomes)
HGVS:: NC_000015.10:g.78880880_78880882del, NC_000015.10:g.78880881_78880882del, NC_000015.10:g.78880882del, NC_000015.10:g.78880882dup, NC_000015.10:g.78880881_78880882dup, NC_000015.10:g.78880880_78880882dup, NC_000015.10:g.78880879_78880882dup, NC_000015.9:g.79173222_79173224del, NC_000015.9:g.79173223_79173224del, NC_000015.9:g.79173224del, NC_000015.9:g.79173224dup, NC_000015.9:g.79173223_79173224dup, NC_000015.9:g.79173222_79173224dup, NC_000015.9:g.79173221_79173224dup

Select item 149102835919.

rs1491028359 has merged into rs11446420 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 15:78879043 (GRCh38)
15:79171385 (GRCh37)
Canonical SPDI:: NC_000015.10:78879034:TTTTTTTTTT:TTTTTTTT,NC_000015.10:78879034:TTTTTTTTTT:TTTTTTTTT,NC_000015.10:78879034:TTTTTTTTTT:TTTTTTTTTTT,NC_000015.10:78879034:TTTTTTTTTT:TTTTTTTTTTTT
Gene:: MORF4L1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0./0 (ALFA)
-=0.1/4 (GENOME_DK)
-=0.11824/118 (GoNL)
-=0.11858/457 (ALSPAC)
-=0.12277/550 (Estonian)
-=0.12621/468 (TWINSUK)
-=0.16167/97 (NorthernSweden)
-=0.16308/781 (1000Genomes)
-=0.23109/3873 (TOMMO)
-=0.29694/544 (Korea1K)
HGVS:: NC_000015.10:g.78879043_78879044del, NC_000015.10:g.78879044del, NC_000015.10:g.78879044dup, NC_000015.10:g.78879043_78879044dup, NC_000015.9:g.79171385_79171386del, NC_000015.9:g.79171386del, NC_000015.9:g.79171386dup, NC_000015.9:g.79171385_79171386dup

Select item 149101541720.

rs1491015417 has merged into rs34145582 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAA,AAAAA [Show Flanks]
Chromosome:: 15:78872126 (GRCh38)
15:79164468 (GRCh37)
Canonical SPDI:: NC_000015.10:78872114:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000015.10:78872114:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:78872114:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:78872114:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:78872114:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA
Gene:: MORF4L1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.3942/1974 (1000Genomes)
HGVS:: NC_000015.10:g.78872126_78872127del, NC_000015.10:g.78872127del, NC_000015.10:g.78872127dup, NC_000015.10:g.78872126_78872127dup, NC_000015.10:g.78872125_78872127dup, NC_000015.9:g.79164468_79164469del, NC_000015.9:g.79164469del, NC_000015.9:g.79164469dup, NC_000015.9:g.79164468_79164469dup, NC_000015.9:g.79164467_79164469dup

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