SNP Links for Gene (Select 105378047) - SNP

Links from Gene

Items: 1 to 20 of 1745

<< First< Prev

Page of 88

Next >Last >>

Select item 14915737251.

rs1491573725 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 6:149029910 (GRCh38)
6:149351046 (GRCh37)
Canonical SPDI:: NC_000006.12:149029909:GG:
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: -=0.0065/25 (ALSPAC)
-=0.0124/46 (TWINSUK)
HGVS:: NC_000006.12:g.149029910_149029911del, NC_000006.11:g.149351046_149351047del

Select item 14915360512.

rs1491536051 has merged into rs3074362 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTGTGTGTGTGTGTGTGTGTGTGTGTG>-,TG,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG [Show Flanks]
Chromosome:: 6:149029883 (GRCh38)
6:149351019 (GRCh37)
Canonical SPDI:: NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:149029866:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGTGTG=0./0 (ALFA)
-=0.2408/928 (ALSPAC)
-=0.4311/2159 (1000Genomes)
HGVS:: NC_000006.12:g.149029867TG[8], NC_000006.12:g.149029867TG[9], NC_000006.12:g.149029867TG[10], NC_000006.12:g.149029867TG[11], NC_000006.12:g.149029867TG[12], NC_000006.12:g.149029867TG[13], NC_000006.12:g.149029867TG[14], NC_000006.12:g.149029867TG[15], NC_000006.12:g.149029867TG[16], NC_000006.12:g.149029867TG[17], NC_000006.12:g.149029867TG[18], NC_000006.12:g.149029867TG[19], NC_000006.12:g.149029867TG[20], NC_000006.12:g.149029867TG[21], NC_000006.12:g.149029867TG[23], NC_000006.12:g.149029867TG[24], NC_000006.12:g.149029867TG[25], NC_000006.12:g.149029867TG[26], NC_000006.12:g.149029867TG[27], NC_000006.12:g.149029867TG[28], NC_000006.12:g.149029867TG[29], NC_000006.11:g.149351003TG[8], NC_000006.11:g.149351003TG[9], NC_000006.11:g.149351003TG[10], NC_000006.11:g.149351003TG[11], NC_000006.11:g.149351003TG[12], NC_000006.11:g.149351003TG[13], NC_000006.11:g.149351003TG[14], NC_000006.11:g.149351003TG[15], NC_000006.11:g.149351003TG[16], NC_000006.11:g.149351003TG[17], NC_000006.11:g.149351003TG[18], NC_000006.11:g.149351003TG[19], NC_000006.11:g.149351003TG[20], NC_000006.11:g.149351003TG[21], NC_000006.11:g.149351003TG[23], NC_000006.11:g.149351003TG[24], NC_000006.11:g.149351003TG[25], NC_000006.11:g.149351003TG[26], NC_000006.11:g.149351003TG[27], NC_000006.11:g.149351003TG[28], NC_000006.11:g.149351003TG[29]

Select item 14907073613.

rs1490707361 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:149028723 (GRCh38)
6:149349859 (GRCh37)
Canonical SPDI:: NC_000006.12:149028722:C:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.149028723C>T, NC_000006.11:g.149349859C>T

Select item 14898090894.

rs1489809089 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:149031200 (GRCh38)
6:149352336 (GRCh37)
Canonical SPDI:: NC_000006.12:149031199:C:A
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000006.12:g.149031200C>A, NC_000006.11:g.149352336C>A

Select item 14893164225.

rs1489316422 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:149031259 (GRCh38)
6:149352395 (GRCh37)
Canonical SPDI:: NC_000006.12:149031258:G:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.149031259G>T, NC_000006.11:g.149352395G>T

Select item 14891367356.

rs1489136735 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:149034035 (GRCh38)
6:149355171 (GRCh37)
Canonical SPDI:: NC_000006.12:149034034:C:A,NC_000006.12:149034034:C:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.149034035C>A, NC_000006.12:g.149034035C>T, NC_000006.11:g.149355171C>A, NC_000006.11:g.149355171C>T

Select item 14889570967.

rs1488957096 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 6:149029543 (GRCh38)
6:149350679 (GRCh37)
Canonical SPDI:: NC_000006.12:149029542:A:G,NC_000006.12:149029542:A:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000073/10 (GnomAD)
HGVS:: NC_000006.12:g.149029543A>G, NC_000006.12:g.149029543A>T, NC_000006.11:g.149350679A>G, NC_000006.11:g.149350679A>T

Select item 14889129418.

rs1488912941 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:149031994 (GRCh38)
6:149353130 (GRCh37)
Canonical SPDI:: NC_000006.12:149031993:A:G
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.149031994A>G, NC_000006.11:g.149353130A>G

Select item 14883332819.

rs1488333281 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:149027772 (GRCh38)
6:149348908 (GRCh37)
Canonical SPDI:: NC_000006.12:149027771:C:A
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000006.12:g.149027772C>A, NC_000006.11:g.149348908C>A, NR_134599.1:n.146G>T

Select item 148818361210.

rs1488183612 has merged into rs869128845 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 6:149027861 (GRCh38)
6:149348997 (GRCh37)
Canonical SPDI:: NC_000006.12:149027860:G:
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
HGVS:: NC_000006.12:g.149027861del, NC_000006.11:g.149348997del

Select item 148748583311.

rs1487485833 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TATTT [Show Flanks]
Chromosome:: 6:149027015 (GRCh38)
6:149348152 (GRCh37)
Canonical SPDI:: NC_000006.12:149027015:TATTT:TATTTTATTT
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: TATTTTATTT=0./0 (ALFA)
HGVS:: NC_000006.12:g.149027016_149027020dup, NC_000006.11:g.149348152_149348156dup

Select item 148700294312.

rs1487002943 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:149028265 (GRCh38)
6:149349401 (GRCh37)
Canonical SPDI:: NC_000006.12:149028264:A:G
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.149028265A>G, NC_000006.11:g.149349401A>G

Select item 148689407913.

rs1486894079 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTC>- [Show Flanks]
Chromosome:: 6:149032609 (GRCh38)
6:149353745 (GRCh37)
Canonical SPDI:: NC_000006.12:149032604:CTTCTTC:CTTC
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CTTC=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.149032606TTC[1], NC_000006.11:g.149353742TTC[1], NR_134599.1:n.52AAG[1]

Select item 148683193214.

rs1486831932 [Homo sapiens]

Variant type:: SNV:
Alleles:: ATATACATTATATT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 148608749715.

rs1486087497 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:149029476 (GRCh38)
6:149350612 (GRCh37)
Canonical SPDI:: NC_000006.12:149029475:A:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.149029476A>T, NC_000006.11:g.149350612A>T

Select item 148603442016.

rs1486034420 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:149030402 (GRCh38)
6:149351538 (GRCh37)
Canonical SPDI:: NC_000006.12:149030401:G:A
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.149030402G>A, NC_000006.11:g.149351538G>A

Select item 148597285617.

rs1485972856 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:149034256 (GRCh38)
6:149355392 (GRCh37)
Canonical SPDI:: NC_000006.12:149034255:T:G
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.149034256T>G, NC_000006.11:g.149355392T>G

Select item 148567199618.

rs1485671996 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:149033571 (GRCh38)
6:149354707 (GRCh37)
Canonical SPDI:: NC_000006.12:149033570:T:G
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.149033571T>G, NC_000006.11:g.149354707T>G

Select item 148544490619.

rs1485444906 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 6:149031328 (GRCh38)
6:149352465 (GRCh37)
Canonical SPDI:: NC_000006.12:149031328:TTTTTTTT:TTTTTTTTT
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.149031336dup, NC_000006.11:g.149352472dup

Select item 148513076220.

rs1485130762 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:149028820 (GRCh38)
6:149349956 (GRCh37)
Canonical SPDI:: NC_000006.12:149028819:G:T
Gene:: UST (Varview), UST-AS2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.149028820G>T, NC_000006.11:g.149349956G>T

<< First< Prev

Page of 88

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1745

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity