SNP Links for Gene (Select 105371622) - SNP

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Items: 1 to 20 of 1623

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Select item 14908921501.

rs1490892150 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:174995637 (GRCh38)
1:174964774 (GRCh37)
Canonical SPDI:: NC_000001.11:174995636:G:A
Gene:: RABGAP1L (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.174995637G>A, NC_000001.10:g.174964774G>A, NG_029961.1:g.1204G>A

Select item 14904925002.

rs1490492500 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:174999300 (GRCh38)
1:174968437 (GRCh37)
Canonical SPDI:: NC_000001.11:174999299:C:T
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.174999300C>T, NC_000001.10:g.174968437C>T, NG_029961.1:g.4867C>T, XR_922296.4:n.347G>A, XR_922296.3:n.53G>A, XR_922296.2:n.54G>A, XR_922296.1:n.53G>A

Select item 14901806203.

rs1490180620 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:175000434 (GRCh38)
1:174969570 (GRCh37)
Canonical SPDI:: NC_000001.11:175000433:G:C
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.175000434G>C, NC_000001.10:g.174969570G>C, NG_029961.1:g.6000G>C

Select item 14897646924.

rs1489764692 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:175000033 (GRCh38)
1:174969169 (GRCh37)
Canonical SPDI:: NC_000001.11:175000032:A:G
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000036/5 (GnomAD)
HGVS:: NC_000001.11:g.175000033A>G, NC_000001.10:g.174969169A>G, NG_029961.1:g.5599A>G, NM_014412.3:c.-148A>G, NM_014412.2:c.-148A>G

Select item 14895848895.

rs1489584889 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTA [Show Flanks]
Chromosome:: 1:175000819 (GRCh38)
1:174969956 (GRCh37)
Canonical SPDI:: NC_000001.11:175000819:GTA:GTAGTA
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTAGTA=0.000071/1 (ALFA)
GTA=0.000057/8 (GnomAD)
GTA=0.000079/21 (TOPMED)
HGVS:: NC_000001.11:g.175000820_175000822dup, NC_000001.10:g.174969956_174969958dup, NG_029961.1:g.6386_6388dup

Select item 14895524296.

rs1489552429 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:175000128 (GRCh38)
1:174969264 (GRCh37)
Canonical SPDI:: NC_000001.11:175000127:T:C
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.175000128T>C, NC_000001.10:g.174969264T>C, NG_029961.1:g.5694T>C, NM_014412.3:c.-53T>C, NM_014412.2:c.-53T>C

Select item 14888877417.

rs1488887741 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:174996369 (GRCh38)
1:174965507 (GRCh37)
Canonical SPDI:: NC_000001.11:174996369:C:CC
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.174996370dup, NC_000001.10:g.174965507dup, NG_029961.1:g.1937dup

Select item 14887886548.

rs1488788654 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:174999974 (GRCh38)
1:174969110 (GRCh37)
Canonical SPDI:: NC_000001.11:174999973:G:A,NC_000001.11:174999973:G:T
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.00006/1 (TOMMO)
HGVS:: NC_000001.11:g.174999974G>A, NC_000001.11:g.174999974G>T, NC_000001.10:g.174969110G>A, NC_000001.10:g.174969110G>T, NG_029961.1:g.5540G>A, NG_029961.1:g.5540G>T, NM_014412.3:c.-207G>A, NM_014412.3:c.-207G>T, NM_014412.2:c.-207G>A, NM_014412.2:c.-207G>T

Select item 14877781079.

rs1487778107 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:174998527 (GRCh38)
1:174967664 (GRCh37)
Canonical SPDI:: NC_000001.11:174998526:G:A,NC_000001.11:174998526:G:T
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.174998527G>A, NC_000001.11:g.174998527G>T, NC_000001.10:g.174967664G>A, NC_000001.10:g.174967664G>T, NG_029961.1:g.4094G>A, NG_029961.1:g.4094G>T

Select item 148766933610.

rs1487669336 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:174998767 (GRCh38)
1:174967905 (GRCh37)
Canonical SPDI:: NC_000001.11:174998767::G
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.174998767_174998768insG, NC_000001.10:g.174967904_174967905insG, NG_029961.1:g.4334_4335insG, XR_922296.4:n.879_880insC, XR_922296.3:n.585_586insC, XR_922296.2:n.586_587insC, XR_922296.1:n.585_586insC

Select item 148754796011.

rs1487547960 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:175000838 (GRCh38)
1:174969974 (GRCh37)
Canonical SPDI:: NC_000001.11:175000837:G:A,NC_000001.11:175000837:G:C
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.175000838G>A, NC_000001.11:g.175000838G>C, NC_000001.10:g.174969974G>A, NC_000001.10:g.174969974G>C, NG_029961.1:g.6404G>A, NG_029961.1:g.6404G>C

Select item 148719061912.

rs1487190619 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 1:175000344 (GRCh38)
1:174969480 (GRCh37)
Canonical SPDI:: NC_000001.11:175000343:A:C,NC_000001.11:175000343:A:G,NC_000001.11:175000343:A:T
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.175000344A>C, NC_000001.11:g.175000344A>G, NC_000001.11:g.175000344A>T, NC_000001.10:g.174969480A>C, NC_000001.10:g.174969480A>G, NC_000001.10:g.174969480A>T, NG_029961.1:g.5910A>C, NG_029961.1:g.5910A>G, NG_029961.1:g.5910A>T

Select item 148700520213.

rs1487005202 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:175001124 (GRCh38)
1:174970260 (GRCh37)
Canonical SPDI:: NC_000001.11:175001123:G:C
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.175001124G>C, NC_000001.10:g.174970260G>C, NG_029961.1:g.6690G>C

Select item 148665253714.

rs1486652537 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:174995085 (GRCh38)
1:174964222 (GRCh37)
Canonical SPDI:: NC_000001.11:174995084:C:T
Gene:: RABGAP1L (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.174995085C>T, NC_000001.10:g.174964222C>T, NG_029961.1:g.652C>T, XM_011510223.3:c.*5084C>T, XM_011510223.1:c.*5084C>T, XM_005245681.3:c.*5084C>T, XM_005245681.1:c.*5084C>T, NM_001330989.2:c.*5084C>T, NM_001330989.1:c.*5084C>T, NM_001243765.2:c.*5084C>T, NM_001243765.1:c.*5084C>T, NM_001243764.2:c.*5084C>T, NM_001243764.1:c.*5084C>T, NR_158982.1:n.8625C>T, NM_001366446.1:c.*5084C>T, XM_047436028.1:c.*5084C>T, NM_001366448.1:c.*5084C>T, XM_047436039.1:c.*5084C>T, NM_001366451.1:c.*5084C>T, NM_001366454.1:c.*5084C>T, NM_001366456.1:c.*5084C>T, NM_001366450.1:c.*5084C>T, XM_047436057.1:c.*5084C>T, XM_047436056.1:c.*5084C>T, NM_001366452.1:c.*5084C>T, XM_047436058.1:c.*5084C>T, XM_047436059.1:c.*5084C>T, NM_001366457.1:c.*5084C>T

Select item 148579697115.

rs1485796971 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:174996101 (GRCh38)
1:174965238 (GRCh37)
Canonical SPDI:: NC_000001.11:174996100:A:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.174996101A>C, NC_000001.10:g.174965238A>C, NG_029961.1:g.1668A>C

Select item 148549157216.

rs1485491572 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:174996582 (GRCh38)
1:174965719 (GRCh37)
Canonical SPDI:: NC_000001.11:174996581:C:T
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.174996582C>T, NC_000001.10:g.174965719C>T, NG_029961.1:g.2149C>T, NG_043900.1:g.159C>T

Select item 148542385617.

rs1485423856 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:174999773 (GRCh38)
1:174968909 (GRCh37)
Canonical SPDI:: NC_000001.11:174999772:C:T
Gene:: CACYBP (Varview), LOC105371622 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0./0 (KOREAN)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.174999773C>T, NC_000001.10:g.174968909C>T, NG_029961.1:g.5339C>T, NM_014412.2:c.-408C>T

Select item 148513433418.

rs1485134334 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:174996224 (GRCh38)
1:174965361 (GRCh37)
Canonical SPDI:: NC_000001.11:174996223:G:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.174996224G>C, NC_000001.10:g.174965361G>C, NG_029961.1:g.1791G>C

Select item 148417551319.

rs1484175513 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:174997427 (GRCh38)
1:174966564 (GRCh37)
Canonical SPDI:: NC_000001.11:174997426:G:C
Gene:: LOC105371622 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.174997427G>C, NC_000001.10:g.174966564G>C, NG_029961.1:g.2994G>C

Select item 148387171920.

rs1483871719 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>G
Chromosome:: no mapping
Canonical SPDI:

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