SNP Links for Gene (Select 105370728) - SNP

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Items: 1 to 20 of 1187

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Select item 14904692511.

rs1490469251 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:23404127 (GRCh38)
15:23649274 (GRCh37)
Canonical SPDI:: NC_000015.10:23404126:G:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.23404127G>A, NC_000015.9:g.23649274G>A, NW_021160017.1:g.4353354G>A

Select item 14900938802.

rs1490093880 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGAGGAGGG [Show Flanks]
Chromosome:: 15:23402092 (GRCh38)
15:23647240 (GRCh37)
Canonical SPDI:: NC_000015.10:23402092:AGGAGGGTGAGGAGGG:AGGAGGGTGAGGAGGGTGAGGAGGG
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGGAGGGTGAGGAGGGTGAGGAGGG=0./0 (ALFA)
AGGAGGGTG=0.000011/3 (TOPMED)
AGGAGGGTG=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.23402100_23402108dup, NC_000015.9:g.23647247_23647255dup, NW_021160017.1:g.4351327_4351335dup

Select item 14900448363.

rs1490044836 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:23407693 (GRCh38)
15:23652840 (GRCh37)
Canonical SPDI:: NC_000015.10:23407692:G:C
Gene:: LOC105370728 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.23407693G>C, NC_000015.9:g.23652840G>C, NW_021160017.1:g.4356920G>C

Select item 14899262994.

rs1489926299 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:23402525 (GRCh38)
15:23647672 (GRCh37)
Canonical SPDI:: NC_000015.10:23402524:G:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000015.10:g.23402525G>A, NC_000015.9:g.23647672G>A, NW_021160017.1:g.4351752G>A

Select item 14888726885.

rs1488872688 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:23403215 (GRCh38)
15:23648362 (GRCh37)
Canonical SPDI:: NC_000015.10:23403214:G:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.00022/1 (ALFA)
A=0.00004/1 (TOMMO)
HGVS:: NC_000015.10:g.23403215G>A, NC_000015.9:g.23648362G>A, NW_021160017.1:g.4352442G>A

Select item 14885467216.

rs1488546721 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:23402003 (GRCh38)
15:23647150 (GRCh37)
Canonical SPDI:: NC_000015.10:23402002:G:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.23402003G>A, NC_000015.9:g.23647150G>A, NW_021160017.1:g.4351230G>A

Select item 14884324037.

rs1488432403 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:23405253 (GRCh38)
15:23650400 (GRCh37)
Canonical SPDI:: NC_000015.10:23405252:T:G
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000015.10:g.23405253T>G, NC_000015.9:g.23650400T>G, NW_021160017.1:g.4354481T>G

Select item 14883502428.

rs1488350242 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:23405483 (GRCh38)
15:23650630 (GRCh37)
Canonical SPDI:: NC_000015.10:23405482:A:G
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.23405483A>G, NC_000015.9:g.23650630A>G, NW_021160017.1:g.4354711A>G

Select item 14880242309.

rs1488024230 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 15:23404158 (GRCh38)
15:23649305 (GRCh37)
Canonical SPDI:: NC_000015.10:23404157:T:A,NC_000015.10:23404157:T:C
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000008/1 (GnomAD)
HGVS:: NC_000015.10:g.23404158T>A, NC_000015.10:g.23404158T>C, NC_000015.9:g.23649305T>A, NC_000015.9:g.23649305T>C, NW_021160017.1:g.4353386T>A, NW_021160017.1:g.4353386T>C

Select item 148802131210.

rs1488021312 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:23404347 (GRCh38)
15:23649494 (GRCh37)
Canonical SPDI:: NC_000015.10:23404346:A:G
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.23404347A>G, NC_000015.9:g.23649494A>G, NW_021160017.1:g.4353575A>G

Select item 148694023611.

rs1486940236 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:23402663 (GRCh38)
15:23647810 (GRCh37)
Canonical SPDI:: NC_000015.10:23402662:G:T
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.23402663G>T, NC_000015.9:g.23647810G>T, NW_021160017.1:g.4351890G>T

Select item 148638375612.

rs1486383756 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>T
Chromosome:: no mapping
Canonical SPDI:

Select item 148598937113.

rs1485989371 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:23407701 (GRCh38)
15:23652848 (GRCh37)
Canonical SPDI:: NC_000015.10:23407700:A:G
Gene:: LOC105370728 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000015.10:g.23407701A>G, NC_000015.9:g.23652848A>G, NW_021160017.1:g.4356928A>G

Select item 148529416914.

rs1485294169 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:23404821 (GRCh38)
15:23649968 (GRCh37)
Canonical SPDI:: NC_000015.10:23404820:T:C
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.23404821T>C, NC_000015.9:g.23649968T>C, NW_021160017.1:g.4354049T>C

Select item 148510399215.

rs1485103992 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:23407442 (GRCh38)
15:23652589 (GRCh37)
Canonical SPDI:: NC_000015.10:23407441:G:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.23407442G>A, NC_000015.9:g.23652589G>A, NW_021160017.1:g.4356669G>A

Select item 148456820116.

rs1484568201 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:23405956 (GRCh38)
15:23651103 (GRCh37)
Canonical SPDI:: NC_000015.10:23405955:T:C
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.23405956T>C, NC_000015.9:g.23651103T>C, NW_021160017.1:g.4355184T>C

Select item 148433769317.

rs1484337693 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:23405387 (GRCh38)
15:23650534 (GRCh37)
Canonical SPDI:: NC_000015.10:23405386:T:C
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
C=0.000142/2 (TOMMO)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000015.10:g.23405387T>C, NC_000015.9:g.23650534T>C, NW_021160017.1:g.4354615T>C

Select item 148373733518.

rs1483737335 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 15:23404117 (GRCh38)
15:23649264 (GRCh37)
Canonical SPDI:: NC_000015.10:23404116:T:C,NC_000015.10:23404116:T:G
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
C=0.000312/2 (1000Genomes)
HGVS:: NC_000015.10:g.23404117T>C, NC_000015.10:g.23404117T>G, NC_000015.9:g.23649264T>C, NC_000015.9:g.23649264T>G, NW_021160017.1:g.4353344T>C, NW_021160017.1:g.4353344T>G

Select item 148372465319.

rs1483724653 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:23404601 (GRCh38)
15:23649748 (GRCh37)
Canonical SPDI:: NC_000015.10:23404600:C:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000015.10:g.23404601C>A, NC_000015.9:g.23649748C>A, NW_021160017.1:g.4353829C>A

Select item 148363513920.

rs1483635139 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:23402088 (GRCh38)
15:23647235 (GRCh37)
Canonical SPDI:: NC_000015.10:23402087:C:A
Gene:: LOC105370728 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.23402088C>A, NC_000015.9:g.23647235C>A, NW_021160017.1:g.4351315C>A

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