SNP Links for Gene (Select 104613533) - SNP

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Select item 14905924901.

rs1490592490 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 15:92471616 (GRCh38)
15:93014846 (GRCh37)
Canonical SPDI:: NC_000015.10:92471615:T:
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.92471616del, NC_000015.9:g.93014846del

Select item 14899807672.

rs1489980767 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:92473495 (GRCh38)
15:93016725 (GRCh37)
Canonical SPDI:: NC_000015.10:92473494:T:C
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.92473495T>C, NC_000015.9:g.93016725T>C

Select item 14892638203.

rs1489263820 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:92472076 (GRCh38)
15:93015306 (GRCh37)
Canonical SPDI:: NC_000015.10:92472075:A:G
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.92472076A>G, NC_000015.9:g.93015306A>G, NM_153040.2:c.-73A>G, NR_161371.1:n.400A>G, NM_001301106.1:c.-73A>G, NR_161370.1:n.400A>G

Select item 14861503474.

rs1486150347 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:92472474 (GRCh38)
15:93015704 (GRCh37)
Canonical SPDI:: NC_000015.10:92472473:G:A,NC_000015.10:92472473:G:T
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.92472474G>A, NC_000015.10:g.92472474G>T, NC_000015.9:g.93015704G>A, NC_000015.9:g.93015704G>T, NM_153040.2:c.326G>A, NM_153040.2:c.326G>T, NR_161371.1:n.798G>A, NR_161371.1:n.798G>T, NM_001301106.1:c.326G>A, NM_001301106.1:c.326G>T, NR_161370.1:n.798G>A, NR_161370.1:n.798G>T

Select item 14859380395.

rs1485938039 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:92471182 (GRCh38)
15:93014412 (GRCh37)
Canonical SPDI:: NC_000015.10:92471181:A:G
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92471182A>G, NC_000015.9:g.93014412A>G

Select item 14852941226.

rs1485294122 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 15:92473227 (GRCh38)
15:93016457 (GRCh37)
Canonical SPDI:: NC_000015.10:92473226:A:T
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.92473227A>T, NC_000015.9:g.93016457A>T

Select item 14845604357.

rs1484560435 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:92471214 (GRCh38)
15:93014444 (GRCh37)
Canonical SPDI:: NC_000015.10:92471213:C:A,NC_000015.10:92471213:C:T
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92471214C>A, NC_000015.10:g.92471214C>T, NC_000015.9:g.93014444C>A, NC_000015.9:g.93014444C>T

Select item 14845127218.

rs1484512721 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92473110 (GRCh38)
15:93016340 (GRCh37)
Canonical SPDI:: NC_000015.10:92473109:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.92473110G>A, NC_000015.9:g.93016340G>A, NR_161371.1:n.1004G>A, NM_001301106.1:c.*34G>A

Select item 14841927819.

rs1484192781 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:92470470 (GRCh38)
15:93013700 (GRCh37)
Canonical SPDI:: NC_000015.10:92470469:T:C
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000015.10:g.92470470T>C, NC_000015.9:g.93013700T>C

Select item 148394231910.

rs1483942319 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:92470381 (GRCh38)
15:93013611 (GRCh37)
Canonical SPDI:: NC_000015.10:92470380:T:C
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000224/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000015.10:g.92470381T>C, NC_000015.9:g.93013611T>C, NR_126501.1:n.332A>G

Select item 148125383111.

rs1481253831 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:92472211 (GRCh38)
15:93015441 (GRCh37)
Canonical SPDI:: NC_000015.10:92472210:T:C
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.92472211T>C, NC_000015.9:g.93015441T>C, NM_153040.2:c.63T>C, NR_161371.1:n.535T>C, NM_001301106.1:c.63T>C, NR_161370.1:n.535T>C

Select item 148116287112.

rs1481162871 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92473176 (GRCh38)
15:93016406 (GRCh37)
Canonical SPDI:: NC_000015.10:92473175:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92473176G>A, NC_000015.9:g.93016406G>A

Select item 148112812413.

rs1481128124 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:92473023 (GRCh38)
15:93016253 (GRCh37)
Canonical SPDI:: NC_000015.10:92473022:A:C
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000015.10:g.92473023A>C, NC_000015.9:g.93016253A>C, NM_153040.2:c.445A>C, NR_161371.1:n.917A>C, NM_001301106.1:c.445A>C, NR_161370.1:n.917A>C

Select item 148078841114.

rs1480788411 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92472639 (GRCh38)
15:93015869 (GRCh37)
Canonical SPDI:: NC_000015.10:92472638:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.92472639G>A, NC_000015.9:g.93015869G>A

Select item 147974992615.

rs1479749926 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92471207 (GRCh38)
15:93014437 (GRCh37)
Canonical SPDI:: NC_000015.10:92471206:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000015.10:g.92471207G>A, NC_000015.9:g.93014437G>A

Select item 147964494116.

rs1479644941 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 15:92473299 (GRCh38)
15:93016529 (GRCh37)
Canonical SPDI:: NC_000015.10:92473298:A:T
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92473299A>T, NC_000015.9:g.93016529A>T

Select item 147941804717.

rs1479418047 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92469790 (GRCh38)
15:93013020 (GRCh37)
Canonical SPDI:: NC_000015.10:92469789:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: upstream_transcript_variant,500B_downstream_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.92469790G>A, NC_000015.9:g.93013020G>A

Select item 147780082218.

rs1477800822 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:92472631 (GRCh38)
15:93015861 (GRCh37)
Canonical SPDI:: NC_000015.10:92472630:C:G
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.92472631C>G, NC_000015.9:g.93015861C>G

Select item 147464314019.

rs1474643140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:92470056 (GRCh38)
15:93013286 (GRCh37)
Canonical SPDI:: NC_000015.10:92470055:C:T
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: upstream_transcript_variant,500B_downstream_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.92470056C>T, NC_000015.9:g.93013286C>T

Select item 147461336420.

rs1474613364 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92472531 (GRCh38)
15:93015761 (GRCh37)
Canonical SPDI:: NC_000015.10:92472530:G:A
Gene:: C15orf32 (Varview), LOC104613533 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.92472531G>A, NC_000015.9:g.93015761G>A

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