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Select item 14915319841.

rs1491531984 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>- [Show Flanks]
Chromosome:: 1:204652279 (GRCh38)
1:204621407 (GRCh37)
Canonical SPDI:: NC_000001.11:204652277:CGC:C
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.00079/13 (TOMMO)
HGVS:: NC_000001.11:g.204652279_204652280del, NC_000001.10:g.204621407_204621408del

Select item 14914644912.

rs1491464491 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AC [Show Flanks]
Chromosome:: 1:204676173 (GRCh38)
1:204645302 (GRCh37)
Canonical SPDI:: NC_000001.11:204676173:AC:ACAC
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ACAC=0./0 (ALFA)
AC=0.000015/2 (GnomAD)
HGVS:: NC_000001.11:g.204676174_204676175dup, NC_000001.10:g.204645302_204645303dup

Select item 14914633833.

rs1491463383 has merged into rs1042438499 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT,TTT [Show Flanks]
Chromosome:: 1:204670007 (GRCh38)
1:204639135 (GRCh37)
Canonical SPDI:: NC_000001.11:204670006:TTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:204670006:TTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:204670006:TTTTTTTTTTT:TTTTTTTTTTTTT
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0.00007/1 (ALFA)
T=0.00136/20 (TOMMO)
-=0.00248/4 (Korea1K)
HGVS:: NC_000001.11:g.204670017del, NC_000001.11:g.204670017dup, NC_000001.11:g.204670016_204670017dup, NC_000001.10:g.204639145del, NC_000001.10:g.204639145dup, NC_000001.10:g.204639144_204639145dup

Select item 14914032284.

rs1491403228 has merged into rs11284966 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:204647167 (GRCh38)
1:204616295 (GRCh37)
Canonical SPDI:: NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:204647155:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAA=0./0 (ALFA)
A=0.1048/525 (1000Genomes)
-=0.1663/641 (ALSPAC)
HGVS:: NC_000001.11:g.204647167_204647171del, NC_000001.11:g.204647168_204647171del, NC_000001.11:g.204647169_204647171del, NC_000001.11:g.204647170_204647171del, NC_000001.11:g.204647171del, NC_000001.11:g.204647171dup, NC_000001.11:g.204647159_204647171dup, NC_000001.11:g.204647171_204647172insAAAAAAAAAAAAAAAAA, NC_000001.10:g.204616295_204616299del, NC_000001.10:g.204616296_204616299del, NC_000001.10:g.204616297_204616299del, NC_000001.10:g.204616298_204616299del, NC_000001.10:g.204616299del, NC_000001.10:g.204616299dup, NC_000001.10:g.204616287_204616299dup, NC_000001.10:g.204616299_204616300insAAAAAAAAAAAAAAAAA

Select item 14914019415.

rs1491401941 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 1:204647155 (GRCh38)
1:204616283 (GRCh37)
Canonical SPDI:: NC_000001.11:204647154:TA:
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.204647155_204647156del, NC_000001.10:g.204616283_204616284del

Select item 14913973996.

rs1491397399 has merged into rs879629462 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,TTT [Show Flanks]
Chromosome:: 1:204671403 (GRCh38)
1:204640531 (GRCh37)
Canonical SPDI:: NC_000001.11:204671401:TTT:T,NC_000001.11:204671401:TTT:TTTT
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.01644/195 (ALFA)
-=0.0033/55 (TOMMO)
-=0.01638/30 (Korea1K)
-=0.02389/2040 (GnomAD)
HGVS:: NC_000001.11:g.204671403_204671404del, NC_000001.11:g.204671404dup, NC_000001.10:g.204640531_204640532del, NC_000001.10:g.204640532dup

Select item 14913393197.

rs1491339319 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 1:204671395 (GRCh38)
1:204640523 (GRCh37)
Canonical SPDI:: NC_000001.11:204671393:TTT:T
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
-=0.002697/353 (GnomAD)
HGVS:: NC_000001.11:g.204671395_204671396del, NC_000001.10:g.204640523_204640524del

Select item 14913261918.

rs1491326191 has merged into rs79698374 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATA>-,TA,TATATA [Show Flanks]
Chromosome:: 1:204657339 (GRCh38)
1:204626467 (GRCh37)
Canonical SPDI:: NC_000001.11:204657334:TATATATA:TATA,NC_000001.11:204657334:TATATATA:TATATA,NC_000001.11:204657334:TATATATA:TATATATATA
Gene:: LRRN2 (Varview), LOC124904490 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATA=0./0 (ALFA)
-=0.00014/4 (TOMMO)
TA=0.00045/2 (Estonian)
HGVS:: NC_000001.11:g.204657335TA[2], NC_000001.11:g.204657335TA[3], NC_000001.11:g.204657335TA[5], NC_000001.10:g.204626463TA[2], NC_000001.10:g.204626463TA[3], NC_000001.10:g.204626463TA[5]

Select item 14912976689.

rs1491297668 [Homo sapiens]

Variant type:: DEL
Alleles:: CC>- [Show Flanks]
Chromosome:: 1:204624252 (GRCh38)
1:204593380 (GRCh37)
Canonical SPDI:: NC_000001.11:204624251:CC:
Gene:: LRRN2 (Varview), LOC105371692 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.204624252_204624253del, NC_000001.10:g.204593380_204593381del

Select item 149129611710.

rs1491296117 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:204666962 (GRCh38)
1:204636090 (GRCh37)
Canonical SPDI:: NC_000001.11:204666961:CA:
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.204666962_204666963del, NC_000001.10:g.204636090_204636091del

Select item 149121358811.

rs1491213588 [Homo sapiens]

Variant type:: DEL
Alleles:: GT>- [Show Flanks]
Chromosome:: 1:204670006 (GRCh38)
1:204639134 (GRCh37)
Canonical SPDI:: NC_000001.11:204670005:GT:
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00025/3 (ALFA)
HGVS:: NC_000001.11:g.204670006_204670007del, NC_000001.10:g.204639134_204639135del

Select item 149119986812.

rs1491199868 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CACACACA,CACACACACA [Show Flanks]
Chromosome:: 1:204657335 (GRCh38)
1:204626464 (GRCh37)
Canonical SPDI:: NC_000001.11:204657335:A:ACACACACA,NC_000001.11:204657335:A:ACACACACACA
Gene:: LRRN2 (Varview), LOC124904490 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: ACACACACACA=0./0 (ALFA)
HGVS:: NC_000001.11:g.204657337CA[4], NC_000001.11:g.204657337CA[5], NC_000001.10:g.204626465CA[4], NC_000001.10:g.204626465CA[5]

Select item 149117704113.

rs1491177041 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCCCAGCC [Show Flanks]
Chromosome:: 1:204652278 (GRCh38)
1:204621407 (GRCh37)
Canonical SPDI:: NC_000001.11:204652278:GCC:GCCCCCCAGCC
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCCCCCCAGCC=0./0 (ALFA)
GCCCCCCA=0.000036/1 (TOMMO)
GCCCCCCA=0.00004/5 (GnomAD)
HGVS:: NC_000001.11:g.204652281_204652282insCCCCAGCC, NC_000001.10:g.204621409_204621410insCCCCAGCC

Select item 149115320414.

rs1491153204 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CT [Show Flanks]
Chromosome:: 1:204624252 (GRCh38)
1:204593381 (GRCh37)
Canonical SPDI:: NC_000001.11:204624252:CT:CTCT
Gene:: LRRN2 (Varview), LOC105371692 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCT=0./0 (ALFA)
CT=0.000007/1 (GnomAD)
CT=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.204624253_204624254dup, NC_000001.10:g.204593381_204593382dup

Select item 149111725315.

rs1491117253 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 1:204676173 (GRCh38)
1:204645301 (GRCh37)
Canonical SPDI:: NC_000001.11:204676172:TA:
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.204676173_204676174del, NC_000001.10:g.204645301_204645302del

Select item 149107816316.

rs1491078163 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GA [Show Flanks]
Chromosome:: 1:204659639 (GRCh38)
1:204628768 (GRCh37)
Canonical SPDI:: NC_000001.11:204659639:GA:GAGA
Gene:: LRRN2 (Varview), LOC124904490 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GAGA=0./0 (ALFA)
GA=0.000015/2 (GnomAD)
HGVS:: NC_000001.11:g.204659640_204659641dup, NC_000001.10:g.204628768_204628769dup

Select item 149106849417.

rs1491068494 has merged into rs34779515 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACACACACACAC>-,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACACAC,ACACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC [Show Flanks]
Chromosome:: 1:204657356 (GRCh38)
1:204626484 (GRCh37)
Canonical SPDI:: NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000001.11:204657341:ACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACAC
Gene:: LRRN2 (Varview), LOC124904490 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACAC=0./0 (ALFA)
-=0.4493/1666 (TWINSUK)
-=0.4642/1789 (ALSPAC)
HGVS:: NC_000001.11:g.204657342AC[7], NC_000001.11:g.204657342AC[9], NC_000001.11:g.204657342AC[10], NC_000001.11:g.204657342AC[11], NC_000001.11:g.204657342AC[12], NC_000001.11:g.204657342AC[14], NC_000001.11:g.204657342AC[15], NC_000001.11:g.204657342AC[16], NC_000001.11:g.204657342AC[17], NC_000001.11:g.204657342AC[18], NC_000001.11:g.204657342AC[19], NC_000001.11:g.204657342AC[20], NC_000001.11:g.204657342AC[21], NC_000001.11:g.204657342AC[22], NC_000001.11:g.204657342AC[23], NC_000001.11:g.204657342AC[24], NC_000001.11:g.204657342AC[25], NC_000001.11:g.204657342AC[26], NC_000001.10:g.204626470AC[7], NC_000001.10:g.204626470AC[9], NC_000001.10:g.204626470AC[10], NC_000001.10:g.204626470AC[11], NC_000001.10:g.204626470AC[12], NC_000001.10:g.204626470AC[14], NC_000001.10:g.204626470AC[15], NC_000001.10:g.204626470AC[16], NC_000001.10:g.204626470AC[17], NC_000001.10:g.204626470AC[18], NC_000001.10:g.204626470AC[19], NC_000001.10:g.204626470AC[20], NC_000001.10:g.204626470AC[21], NC_000001.10:g.204626470AC[22], NC_000001.10:g.204626470AC[23], NC_000001.10:g.204626470AC[24], NC_000001.10:g.204626470AC[25], NC_000001.10:g.204626470AC[26]

Select item 149099756418.

rs1490997564 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:204680731 (GRCh38)
1:204649859 (GRCh37)
Canonical SPDI:: NC_000001.11:204680730:G:C
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.204680731G>C, NC_000001.10:g.204649859G>C

Select item 149098758919.

rs1490987589 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:204680572 (GRCh38)
1:204649700 (GRCh37)
Canonical SPDI:: NC_000001.11:204680571:A:T
Gene:: LRRN2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.204680572A>T, NC_000001.10:g.204649700A>T

Select item 149092783920.

rs1490927839 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:204624085 (GRCh38)
1:204593213 (GRCh37)
Canonical SPDI:: NC_000001.11:204624084:T:G
Gene:: LRRN2 (Varview), LOC105371692 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.204624085T>G, NC_000001.10:g.204593213T>G

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