SNP Links for Gene (Select 104355135) - SNP

Links from Gene

Items: 1 to 20 of 6141

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Select item 14906070391.

rs1490607039 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:110986625 (GRCh38)
13:111638972 (GRCh37)
Canonical SPDI:: NC_000013.11:110986624:T:C
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110986625T>C, NC_000013.10:g.111638972T>C

Select item 14906063792.

rs1490606379 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:110971962 (GRCh38)
13:111624309 (GRCh37)
Canonical SPDI:: NC_000013.11:110971961:G:A
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110971962G>A, NC_000013.10:g.111624309G>A

Select item 14901870993.

rs1490187099 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:110979089 (GRCh38)
13:111631436 (GRCh37)
Canonical SPDI:: NC_000013.11:110979088:C:G
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110979089C>G, NC_000013.10:g.111631436C>G

Select item 14901172834.

rs1490117283 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:110987103 (GRCh38)
13:111639450 (GRCh37)
Canonical SPDI:: NC_000013.11:110987102:T:C
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.110987103T>C, NC_000013.10:g.111639450T>C

Select item 14900688785.

rs1490068878 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:110979312 (GRCh38)
13:111631659 (GRCh37)
Canonical SPDI:: NC_000013.11:110979311:T:C
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110979312T>C, NC_000013.10:g.111631659T>C

Select item 14900322376.

rs1490032237 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 13:110991032 (GRCh38)
13:111643379 (GRCh37)
Canonical SPDI:: NC_000013.11:110991031:T:A
Gene:: LINC00431 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.110991032T>A, NC_000013.10:g.111643379T>A

Select item 14900034857.

rs1490003485 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:110965467 (GRCh38)
13:111617814 (GRCh37)
Canonical SPDI:: NC_000013.11:110965466:T:C
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.110965467T>C, NC_000013.10:g.111617814T>C

Select item 14898234568.

rs1489823456 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:110979073 (GRCh38)
13:111631420 (GRCh37)
Canonical SPDI:: NC_000013.11:110979072:A:G
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110979073A>G, NC_000013.10:g.111631420A>G

Select item 14897981149.

rs1489798114 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 13:110976672 (GRCh38)
13:111629019 (GRCh37)
Canonical SPDI:: NC_000013.11:110976671:C:G,NC_000013.11:110976671:C:T
Gene:: LINC00431 (Varview), LOC124903213 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/1 (GnomAD)
T=0.000011/3 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000013.11:g.110976672C>G, NC_000013.11:g.110976672C>T, NC_000013.10:g.111629019C>G, NC_000013.10:g.111629019C>T

Select item 148972951210.

rs1489729512 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:110964730 (GRCh38)
13:111617077 (GRCh37)
Canonical SPDI:: NC_000013.11:110964729:T:C
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000035/1 (TOMMO)
HGVS:: NC_000013.11:g.110964730T>C, NC_000013.10:g.111617077T>C

Select item 148945809411.

rs1489458094 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:110979800 (GRCh38)
13:111632147 (GRCh37)
Canonical SPDI:: NC_000013.11:110979799:C:T
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.110979800C>T, NC_000013.10:g.111632147C>T

Select item 148905487012.

rs1489054870 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:110966830 (GRCh38)
13:111619177 (GRCh37)
Canonical SPDI:: NC_000013.11:110966829:A:G
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110966830A>G, NC_000013.10:g.111619177A>G

Select item 148904005513.

rs1489040055 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:110975409 (GRCh38)
13:111627756 (GRCh37)
Canonical SPDI:: NC_000013.11:110975408:G:A
Gene:: LINC00431 (Varview), LOC124903213 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110975409G>A, NC_000013.10:g.111627756G>A

Select item 148869431214.

rs1488694312 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:110979937 (GRCh38)
13:111632284 (GRCh37)
Canonical SPDI:: NC_000013.11:110979936:G:A
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110979937G>A, NC_000013.10:g.111632284G>A

Select item 148861703215.

rs1488617032 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 13:110980858 (GRCh38)
13:111633205 (GRCh37)
Canonical SPDI:: NC_000013.11:110980857:T:A
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000013.11:g.110980858T>A, NC_000013.10:g.111633205T>A

Select item 148856995216.

rs1488569952 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:110988861 (GRCh38)
13:111641208 (GRCh37)
Canonical SPDI:: NC_000013.11:110988860:A:G
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
HGVS:: NC_000013.11:g.110988861A>G, NC_000013.10:g.111641208A>G

Select item 148852948917.

rs1488529489 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:110987605 (GRCh38)
13:111639952 (GRCh37)
Canonical SPDI:: NC_000013.11:110987604:C:G
Gene:: LINC00431 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110987605C>G, NC_000013.10:g.111639952C>G

Select item 148846176618.

rs1488461766 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 13:110969505 (GRCh38)
13:111621852 (GRCh37)
Canonical SPDI:: NC_000013.11:110969504:G:C
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.110969505G>C, NC_000013.10:g.111621852G>C

Select item 148845022019.

rs1488450220 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:110972300 (GRCh38)
13:111624647 (GRCh37)
Canonical SPDI:: NC_000013.11:110972299:C:T
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110972300C>T, NC_000013.10:g.111624647C>T

Select item 148826862920.

rs1488268629 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:110966084 (GRCh38)
13:111618431 (GRCh37)
Canonical SPDI:: NC_000013.11:110966083:A:G
Gene:: LINC00431 (Varview), LOC105370364 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.110966084A>G, NC_000013.10:g.111618431A>G, NR_126378.1:n.58A>G

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