SNP Links for Gene (Select 102800314) - SNP

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Select item 14915360661.

rs1491536066 [Homo sapiens]

Variant type:: DELINS
Alleles:: TC>- [Show Flanks]
Chromosome:: 2:6651480 (GRCh38)
2:6791612 (GRCh37)
Canonical SPDI:: NC_000002.12:6651477:TCTC:TC
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TCTC=0./0 (ALFA)
HGVS:: NC_000002.12:g.6651478TC[1], NC_000002.11:g.6791610TC[1]

Select item 14915215992.

rs1491521599 has merged into rs762311622 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 2:6651494 (GRCh38)
2:6791626 (GRCh37)
Canonical SPDI:: NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:6651481:AAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000002.12:g.6651494_6651506del, NC_000002.12:g.6651495_6651506del, NC_000002.12:g.6651496_6651506del, NC_000002.12:g.6651497_6651506del, NC_000002.12:g.6651498_6651506del, NC_000002.12:g.6651499_6651506del, NC_000002.12:g.6651500_6651506del, NC_000002.12:g.6651501_6651506del, NC_000002.12:g.6651502_6651506del, NC_000002.12:g.6651503_6651506del, NC_000002.12:g.6651504_6651506del, NC_000002.12:g.6651505_6651506del, NC_000002.12:g.6651506del, NC_000002.12:g.6651506dup, NC_000002.12:g.6651505_6651506dup, NC_000002.12:g.6651504_6651506dup, NC_000002.12:g.6651503_6651506dup, NC_000002.12:g.6651502_6651506dup, NC_000002.12:g.6651501_6651506dup, NC_000002.12:g.6651500_6651506dup, NC_000002.12:g.6651499_6651506dup, NC_000002.12:g.6651498_6651506dup, NC_000002.12:g.6651497_6651506dup, NC_000002.12:g.6651496_6651506dup, NC_000002.12:g.6651489_6651506dup, NC_000002.12:g.6651506_6651507insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000002.12:g.6651482_6651506A[33]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000002.11:g.6791626_6791638del, NC_000002.11:g.6791627_6791638del, NC_000002.11:g.6791628_6791638del, NC_000002.11:g.6791629_6791638del, NC_000002.11:g.6791630_6791638del, NC_000002.11:g.6791631_6791638del, NC_000002.11:g.6791632_6791638del, NC_000002.11:g.6791633_6791638del, NC_000002.11:g.6791634_6791638del, NC_000002.11:g.6791635_6791638del, NC_000002.11:g.6791636_6791638del, NC_000002.11:g.6791637_6791638del, NC_000002.11:g.6791638del, NC_000002.11:g.6791638dup, NC_000002.11:g.6791637_6791638dup, NC_000002.11:g.6791636_6791638dup, NC_000002.11:g.6791635_6791638dup, NC_000002.11:g.6791634_6791638dup, NC_000002.11:g.6791633_6791638dup, NC_000002.11:g.6791632_6791638dup, NC_000002.11:g.6791631_6791638dup, NC_000002.11:g.6791630_6791638dup, NC_000002.11:g.6791629_6791638dup, NC_000002.11:g.6791628_6791638dup, NC_000002.11:g.6791621_6791638dup, NC_000002.11:g.6791638_6791639insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000002.11:g.6791614_6791638A[33]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 14914065943.

rs1491406594 [Homo sapiens]

Variant type:: INS
Alleles:: ->TG [Show Flanks]
Chromosome:: 2:6651478 (GRCh38)
2:6791611 (GRCh37)
Canonical SPDI:: NC_000002.12:6651478::TG
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: TG=0.00032/12 (GnomAD)
HGVS:: NC_000002.12:g.6651478_6651479insTG, NC_000002.11:g.6791610_6791611insTG

Select item 14913112194.

rs1491311219 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TA
Chromosome:: no mapping
Canonical SPDI:

Select item 14910619845.

rs1491061984 has merged into rs34459591 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTT>-,TT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 2:6651612 (GRCh38)
2:6791744 (GRCh37)
Canonical SPDI:: NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000002.12:6651606:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
T=0.4553/2280 (1000Genomes)
HGVS:: NC_000002.12:g.6651612_6651621del, NC_000002.12:g.6651614_6651621del, NC_000002.12:g.6651616_6651621del, NC_000002.12:g.6651617_6651621del, NC_000002.12:g.6651619_6651621del, NC_000002.12:g.6651620_6651621del, NC_000002.12:g.6651621del, NC_000002.12:g.6651621dup, NC_000002.12:g.6651620_6651621dup, NC_000002.12:g.6651619_6651621dup, NC_000002.12:g.6651618_6651621dup, NC_000002.12:g.6651617_6651621dup, NC_000002.12:g.6651611_6651621dup, NC_000002.11:g.6791744_6791753del, NC_000002.11:g.6791746_6791753del, NC_000002.11:g.6791748_6791753del, NC_000002.11:g.6791749_6791753del, NC_000002.11:g.6791751_6791753del, NC_000002.11:g.6791752_6791753del, NC_000002.11:g.6791753del, NC_000002.11:g.6791753dup, NC_000002.11:g.6791752_6791753dup, NC_000002.11:g.6791751_6791753dup, NC_000002.11:g.6791750_6791753dup, NC_000002.11:g.6791749_6791753dup, NC_000002.11:g.6791743_6791753dup

Select item 14909423156.

rs1490942315 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:6650277 (GRCh38)
2:6790409 (GRCh37)
Canonical SPDI:: NC_000002.12:6650276:T:C
Gene:: MIR7515 (Varview), MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.6650277T>C, NC_000002.11:g.6790409T>C, NR_110497.1:n.243A>G

Select item 14899600977.

rs1489960097 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6651014 (GRCh38)
2:6791146 (GRCh37)
Canonical SPDI:: NC_000002.12:6651013:C:T
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.6651014C>T, NC_000002.11:g.6791146C>T

Select item 14897671388.

rs1489767138 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6651022 (GRCh38)
2:6791154 (GRCh37)
Canonical SPDI:: NC_000002.12:6651021:C:T
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000071/1 (TOMMO)
HGVS:: NC_000002.12:g.6651022C>T, NC_000002.11:g.6791154C>T

Select item 14892096149.

rs1489209614 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6652016 (GRCh38)
2:6792148 (GRCh37)
Canonical SPDI:: NC_000002.12:6652015:C:T
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000224/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000002.12:g.6652016C>T, NC_000002.11:g.6792148C>T

Select item 148917838810.

rs1489178388 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:6650177 (GRCh38)
2:6790309 (GRCh37)
Canonical SPDI:: NC_000002.12:6650176:T:A
Gene:: MIR7515 (Varview), MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6650177T>A, NC_000002.11:g.6790309T>A, NR_110497.1:n.343A>T

Select item 148915785611.

rs1489157856 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:6651772 (GRCh38)
2:6791904 (GRCh37)
Canonical SPDI:: NC_000002.12:6651771:A:G
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.6651772A>G, NC_000002.11:g.6791904A>G

Select item 148913029112.

rs1489130291 [Homo sapiens]

Variant type:: DEL
Alleles:: TCAA>- [Show Flanks]
Chromosome:: 2:6651480 (GRCh38)
2:6791612 (GRCh37)
Canonical SPDI:: NC_000002.12:6651479:TCAA:
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.03102/368 (ALFA)
-=0.00024/8 (GnomAD)
-=0.0058/162 (TOMMO)
HGVS:: NC_000002.12:g.6651480_6651483del, NC_000002.11:g.6791612_6791615del

Select item 148867984513.

rs1488679845 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 2:6649880 (GRCh38)
2:6790012 (GRCh37)
Canonical SPDI:: NC_000002.12:6649879:T:A,NC_000002.12:6649879:T:C
Gene:: MIR7515 (Varview), MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.6649880T>A, NC_000002.12:g.6649880T>C, NC_000002.11:g.6790012T>A, NC_000002.11:g.6790012T>C

Select item 148781139114.

rs1487811391 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:6651724 (GRCh38)
2:6791856 (GRCh37)
Canonical SPDI:: NC_000002.12:6651723:G:A
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.6651724G>A, NC_000002.11:g.6791856G>A

Select item 148453003315.

rs1484530033 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:6651442 (GRCh38)
2:6791574 (GRCh37)
Canonical SPDI:: NC_000002.12:6651441:C:A
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000084/1 (ALFA)
A=0.000008/1 (GnomAD)
HGVS:: NC_000002.12:g.6651442C>A, NC_000002.11:g.6791574C>A

Select item 148371867616.

rs1483718676 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:6651617 (GRCh38)
2:6791749 (GRCh37)
Canonical SPDI:: NC_000002.12:6651616:T:G
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.6651617T>G, NC_000002.11:g.6791749T>G

Select item 148214713017.

rs1482147130 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:6648842 (GRCh38)
2:6788974 (GRCh37)
Canonical SPDI:: NC_000002.12:6648841:G:C
Gene:: MIR7515 (Varview), MIR7515HG (Varview)
Functional Consequence:: downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.6648842G>C, NC_000002.11:g.6788974G>C

Select item 147960654118.

rs1479606541 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6651125 (GRCh38)
2:6791257 (GRCh37)
Canonical SPDI:: NC_000002.12:6651124:C:T
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.6651125C>T, NC_000002.11:g.6791257C>T

Select item 147920750219.

rs1479207502 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:6651274 (GRCh38)
2:6791406 (GRCh37)
Canonical SPDI:: NC_000002.12:6651273:T:C
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6651274T>C, NC_000002.11:g.6791406T>C

Select item 147877272620.

rs1478772726 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:6651820 (GRCh38)
2:6791952 (GRCh37)
Canonical SPDI:: NC_000002.12:6651819:G:A
Gene:: MIR7515HG (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.6651820G>A, NC_000002.11:g.6791952G>A

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